Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4008

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,798,971	-		Echvi_4006	0.49	-1.0
4,798,986	+		Echvi_4006	0.51	+1.7
4,799,017	-		Echvi_4006	0.55	-1.8
4,799,100	-		Echvi_4006	0.64	+1.0
4,799,100	-		Echvi_4006	0.64	-0.2
4,799,120	+		Echvi_4006	0.67	-0.6
4,799,120	+		Echvi_4006	0.67	-0.1
4,799,121	-		Echvi_4006	0.67	-0.7
4,799,144	+		Echvi_4006	0.70	+0.5
4,799,145	-		Echvi_4006	0.70	+1.5
4,799,145	-		Echvi_4006	0.70	-0.2
4,799,145	-		Echvi_4006	0.70	-1.3
4,799,159	+		Echvi_4006	0.71	-0.5
4,799,160	-		Echvi_4006	0.72	-2.5
4,799,251	+		Echvi_4006	0.82	+2.1
4,799,252	-		Echvi_4006	0.82	+0.9
4,799,252	-		Echvi_4006	0.82	-1.2
4,799,272	-		Echvi_4006	0.85	-2.3
4,799,313	-		Echvi_4006	0.90	-0.4
4,799,374	-				+2.0
4,799,393	-				-1.6
4,799,393	-				-1.0
4,799,393	-				+2.6
4,799,402	-				-4.2
4,799,402	-				-1.5
4,799,410	-				-0.5
4,799,414	-				-0.5
4,799,421	+				-0.1
4,799,421	+				-0.0
4,799,443	+				-1.2
4,799,443	+				+2.6
4,799,443	+				+1.8
4,799,447	+				-0.9
4,799,499	+				+2.0
4,799,499	+				-1.5
4,799,500	-				-2.5
4,799,547	-		Echvi_4007	0.26	-1.7
4,799,601	-		Echvi_4007	0.50	-0.2
4,799,605	+		Echvi_4007	0.52	+0.4
4,799,605	+		Echvi_4007	0.52	+0.6
4,799,606	-		Echvi_4007	0.52	-1.9
4,799,606	-		Echvi_4007	0.52	+2.1
4,799,651	+		Echvi_4007	0.73	-0.1
4,799,651	+		Echvi_4007	0.73	+0.5
4,799,663	+		Echvi_4007	0.78	-3.5
4,799,664	-		Echvi_4007	0.78	-0.9
4,799,687	+		Echvi_4007	0.89	+0.8
4,799,693	+				-1.7
4,799,693	+				-0.5
4,799,718	-				-1.4
4,799,725	+				-2.2
4,799,725	+				-1.5
4,799,728	+				+0.3
4,799,729	-				+1.4
4,799,729	-				-3.7
4,799,742	-				-0.8
4,799,842	-				-1.0
4,799,849	+				-1.0
4,799,850	-				+0.6
4,799,867	+				+1.0
4,799,868	-				-2.2
4,799,878	+				-0.2
4,799,878	+				+3.1
4,799,878	+				-1.7
4,799,881	-				-1.8
4,799,882	+				+0.3
4,799,882	+				+2.7
4,799,883	-				-2.5
4,799,897	+				-1.8
4,799,898	-				-1.6
4,799,903	+				+1.5
4,799,947	-				+2.4
4,800,007	-				+1.1
4,800,009	+				-2.7
4,800,010	-				-1.9
4,800,163	-		Echvi_4008	0.22	-2.1
4,800,209	+		Echvi_4008	0.26	-2.7
4,800,210	-		Echvi_4008	0.26	+1.3
4,800,210	-		Echvi_4008	0.26	-2.7
4,800,333	-		Echvi_4008	0.36	-1.7
4,800,348	+		Echvi_4008	0.37	-1.8
4,800,348	+		Echvi_4008	0.37	+0.8
4,800,348	+		Echvi_4008	0.37	+0.5
4,800,349	-		Echvi_4008	0.37	-2.5
4,800,349	-		Echvi_4008	0.37	-1.7
4,800,396	+		Echvi_4008	0.41	-1.2
4,800,418	+		Echvi_4008	0.43	-1.8
4,800,421	-		Echvi_4008	0.43	-1.9
4,800,421	-		Echvi_4008	0.43	-1.9
4,800,457	+		Echvi_4008	0.46	+2.1
4,800,473	+		Echvi_4008	0.47	+0.9
4,800,654	+		Echvi_4008	0.62	+1.0
4,800,655	-		Echvi_4008	0.62	-0.7
4,800,658	+		Echvi_4008	0.63	+0.9
4,800,688	+		Echvi_4008	0.65	-1.9
4,800,689	-		Echvi_4008	0.65	-1.5
4,800,689	-		Echvi_4008	0.65	+0.4
4,800,743	-		Echvi_4008	0.69	-2.6
4,800,743	-		Echvi_4008	0.69	-0.5
4,800,743	-		Echvi_4008	0.69	-0.7
4,800,778	+		Echvi_4008	0.72	+0.4
4,800,779	-		Echvi_4008	0.72	-0.7
4,800,779	-		Echvi_4008	0.72	-2.8
4,800,780	+		Echvi_4008	0.72	+0.1
4,800,781	-		Echvi_4008	0.73	-2.2
4,800,781	-		Echvi_4008	0.73	-0.7
4,800,781	-		Echvi_4008	0.73	-0.7
4,800,897	-		Echvi_4008	0.82	+0.0
4,800,961	+		Echvi_4008	0.87	-2.7
4,801,001	+				-0.3
4,801,001	+				+1.0
4,801,042	+				-2.4
4,801,042	+				+0.6
4,801,042	+				-1.7
4,801,043	-				-1.5
4,801,111	-				-3.4
4,801,111	-				-3.1
4,801,133	-				-1.0
4,801,135	+				+1.6
4,801,136	-				+1.7
4,801,136	-				+0.5
4,801,162	+				-0.0
4,801,168	-				-0.5
4,801,208	+				-2.2
4,801,208	+				-1.7
4,801,235	+				-2.3
4,801,235	+				-0.2
4,801,235	+				-1.9
4,801,236	-				-2.6
4,801,236	-				+1.8
4,801,336	+				-0.5
4,801,337	-				-2.0
4,801,337	-				-3.1
4,801,377	-				-1.6
4,801,377	-				-3.3
4,801,396	+				-0.2
4,801,396	+				+0.9
4,801,396	+				-3.0
4,801,397	-				+0.6
4,801,397	-				-1.7
4,801,397	-				-1.4
4,801,411	-				-1.0
4,801,491	+		Echvi_4009	0.15	-0.5
4,801,492	-		Echvi_4009	0.15	-1.6
4,801,504	+		Echvi_4009	0.17	+0.9
4,801,504	+		Echvi_4009	0.17	-0.8
4,801,505	-		Echvi_4009	0.17	+1.2
4,801,541	+		Echvi_4009	0.20	-0.5
4,801,542	-		Echvi_4009	0.20	+1.0
4,801,542	-		Echvi_4009	0.20	-0.0
4,801,542	-		Echvi_4009	0.20	-1.8
4,801,542	-		Echvi_4009	0.20	+1.1
4,801,561	+		Echvi_4009	0.22	+1.4
4,801,561	+		Echvi_4009	0.22	+1.4
4,801,616	-		Echvi_4009	0.28	-1.6
4,801,712	+		Echvi_4009	0.37	-2.0
4,801,763	+		Echvi_4009	0.42	+1.0
4,801,773	+		Echvi_4009	0.43	-1.2
4,801,909	+		Echvi_4009	0.56	+0.9
4,801,995	+		Echvi_4009	0.65	+0.1
4,802,016	+		Echvi_4009	0.67	-2.3
4,802,017	-		Echvi_4009	0.67	-0.7
4,802,044	-		Echvi_4009	0.70	-1.0