Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4006

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,797,598	+				-1.3
4,797,598	+				-1.9
4,797,599	-				-0.7
4,797,703	+				-1.8
4,797,713	+				-2.5
4,797,714	-				+0.6
4,797,718	-				+1.6
4,797,719	+				-1.3
4,797,720	-				-1.2
4,797,886	-		Echvi_4005	0.28	-1.2
4,797,918	+		Echvi_4005	0.32	+0.9
4,797,998	-		Echvi_4005	0.42	+0.0
4,798,028	-		Echvi_4005	0.46	+0.3
4,798,028	-		Echvi_4005	0.46	+1.9
4,798,028	-		Echvi_4005	0.46	-1.3
4,798,223	+		Echvi_4005	0.71	-0.2
4,798,224	-		Echvi_4005	0.71	+3.2
4,798,267	-		Echvi_4005	0.76	+1.1
4,798,296	+		Echvi_4005	0.80	-1.2
4,798,296	+		Echvi_4005	0.80	-2.4
4,798,297	-		Echvi_4005	0.80	-0.4
4,798,297	-		Echvi_4005	0.80	-2.8
4,798,330	+		Echvi_4005	0.84	-2.4
4,798,330	+		Echvi_4005	0.84	-3.4
4,798,330	+		Echvi_4005	0.84	-2.5
4,798,331	-		Echvi_4005	0.84	-0.5
4,798,331	-		Echvi_4005	0.84	-0.2
4,798,340	+		Echvi_4005	0.86	-1.0
4,798,341	-		Echvi_4005	0.86	-1.3
4,798,433	+				-0.2
4,798,443	-				-1.7
4,798,443	-				+2.0
4,798,468	+				+1.1
4,798,471	+				-2.5
4,798,471	+				-1.0
4,798,472	-				+0.9
4,798,472	-				+0.1
4,798,472	-				-1.3
4,798,476	-				+1.5
4,798,492	-				+1.5
4,798,514	-				-1.3
4,798,560	+				+1.8
4,798,630	+				+1.2
4,798,631	-				+0.4
4,798,631	-				+4.9
4,798,636	+				+3.5
4,798,636	+				-1.0
4,798,636	+				-1.5
4,798,637	-				-3.2
4,798,648	+		Echvi_4006	0.11	+1.8
4,798,649	-		Echvi_4006	0.11	-2.4
4,798,649	-		Echvi_4006	0.11	-1.3
4,798,649	-		Echvi_4006	0.11	-2.9
4,798,649	-		Echvi_4006	0.11	+2.1
4,798,682	+		Echvi_4006	0.15	-0.7
4,798,711	+		Echvi_4006	0.18	+1.0
4,798,711	+		Echvi_4006	0.18	+0.9
4,798,712	-		Echvi_4006	0.18	+0.1
4,798,738	+		Echvi_4006	0.21	-1.3
4,798,739	-		Echvi_4006	0.21	-2.6
4,798,740	+		Echvi_4006	0.22	+1.4
4,798,740	+		Echvi_4006	0.22	+1.9
4,798,783	-		Echvi_4006	0.27	-2.9
4,798,783	-		Echvi_4006	0.27	+0.8
4,798,792	+		Echvi_4006	0.28	+1.9
4,798,793	-		Echvi_4006	0.28	-2.1
4,798,793	-		Echvi_4006	0.28	-0.5
4,798,807	+		Echvi_4006	0.30	+1.1
4,798,807	+		Echvi_4006	0.30	+2.6
4,798,829	+		Echvi_4006	0.32	-1.0
4,798,844	-		Echvi_4006	0.34	+1.0
4,798,971	-		Echvi_4006	0.49	-1.0
4,798,986	+		Echvi_4006	0.51	+1.7
4,799,017	-		Echvi_4006	0.55	-1.8
4,799,100	-		Echvi_4006	0.64	+1.0
4,799,100	-		Echvi_4006	0.64	-0.2
4,799,120	+		Echvi_4006	0.67	-0.6
4,799,120	+		Echvi_4006	0.67	-0.1
4,799,121	-		Echvi_4006	0.67	-0.7
4,799,144	+		Echvi_4006	0.70	+0.5
4,799,145	-		Echvi_4006	0.70	+1.5
4,799,145	-		Echvi_4006	0.70	-0.2
4,799,145	-		Echvi_4006	0.70	-1.3
4,799,159	+		Echvi_4006	0.71	-0.5
4,799,160	-		Echvi_4006	0.72	-2.5
4,799,251	+		Echvi_4006	0.82	+2.1
4,799,252	-		Echvi_4006	0.82	+0.9
4,799,252	-		Echvi_4006	0.82	-1.2
4,799,272	-		Echvi_4006	0.85	-2.3
4,799,313	-		Echvi_4006	0.90	-0.4
4,799,374	-				+2.0
4,799,393	-				-1.6
4,799,393	-				-1.0
4,799,393	-				+2.6
4,799,402	-				-4.2
4,799,402	-				-1.5
4,799,410	-				-0.5
4,799,414	-				-0.5
4,799,421	+				-0.1
4,799,421	+				-0.0
4,799,443	+				-1.2
4,799,443	+				+2.6
4,799,443	+				+1.8
4,799,447	+				-0.9
4,799,499	+				+2.0
4,799,499	+				-1.5
4,799,500	-				-2.5
4,799,547	-		Echvi_4007	0.26	-1.7
4,799,601	-		Echvi_4007	0.50	-0.2
4,799,605	+		Echvi_4007	0.52	+0.4
4,799,605	+		Echvi_4007	0.52	+0.6
4,799,606	-		Echvi_4007	0.52	-1.9
4,799,606	-		Echvi_4007	0.52	+2.1
4,799,651	+		Echvi_4007	0.73	-0.1
4,799,651	+		Echvi_4007	0.73	+0.5
4,799,663	+		Echvi_4007	0.78	-3.5
4,799,664	-		Echvi_4007	0.78	-0.9
4,799,687	+		Echvi_4007	0.89	+0.8
4,799,693	+				-1.7
4,799,693	+				-0.5
4,799,718	-				-1.4
4,799,725	+				-2.2
4,799,725	+				-1.5
4,799,728	+				+0.3
4,799,729	-				+1.4
4,799,729	-				-3.7
4,799,742	-				-0.8
4,799,842	-				-1.0
4,799,849	+				-1.0
4,799,850	-				+0.6
4,799,867	+				+1.0
4,799,868	-				-2.2
4,799,878	+				-0.2
4,799,878	+				+3.1
4,799,878	+				-1.7
4,799,881	-				-1.8
4,799,882	+				+0.3
4,799,882	+				+2.7
4,799,883	-				-2.5
4,799,897	+				-1.8
4,799,898	-				-1.6
4,799,903	+				+1.5
4,799,947	-				+2.4
4,800,007	-				+1.1
4,800,009	+				-2.7
4,800,010	-				-1.9
4,800,163	-		Echvi_4008	0.22	-2.1
4,800,209	+		Echvi_4008	0.26	-2.7
4,800,210	-		Echvi_4008	0.26	+1.3
4,800,210	-		Echvi_4008	0.26	-2.7
4,800,333	-		Echvi_4008	0.36	-1.7
4,800,348	+		Echvi_4008	0.37	-1.8
4,800,348	+		Echvi_4008	0.37	+0.8
4,800,348	+		Echvi_4008	0.37	+0.5
4,800,349	-		Echvi_4008	0.37	-2.5
4,800,349	-		Echvi_4008	0.37	-1.7
4,800,396	+		Echvi_4008	0.41	-1.2