Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4002

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,793,612	+				+1.0
4,793,616	+				-2.2
4,793,616	+				+1.8
4,793,616	+				-1.6
4,793,639	+				-2.6
4,793,639	+				-2.0
4,793,639	+				+0.7
4,793,643	-				-2.1
4,793,645	+				-0.3
4,793,645	+				+0.3
4,793,645	+				+0.7
4,793,646	-				-2.1
4,793,646	-				+2.1
4,793,665	-				+0.1
4,793,689	-				-0.5
4,793,717	+				-0.1
4,793,717	+				-1.5
4,793,735	+				+2.0
4,793,735	+				+1.8
4,793,751	+				-1.0
4,793,772	-				-0.5
4,793,774	+				-0.6
4,793,775	-				-0.5
4,793,775	-				+0.7
4,793,775	-				-1.6
4,793,775	-				-1.3
4,793,775	-				-1.0
4,793,865	-		Echvi_4001	0.18	-1.7
4,793,879	+		Echvi_4001	0.21	-1.5
4,793,879	+		Echvi_4001	0.21	-1.5
4,793,879	+		Echvi_4001	0.21	+0.2
4,793,880	-		Echvi_4001	0.21	-1.7
4,793,880	-		Echvi_4001	0.21	-0.4
4,793,880	-		Echvi_4001	0.21	+0.7
4,793,880	-		Echvi_4001	0.21	-0.5
4,793,883	+		Echvi_4001	0.22	-1.1
4,793,884	-		Echvi_4001	0.22	-1.2
4,794,024	+		Echvi_4001	0.50	-2.6
4,794,024	+		Echvi_4001	0.50	-2.0
4,794,088	+		Echvi_4001	0.62	+0.3
4,794,088	+		Echvi_4001	0.62	+1.0
4,794,089	-		Echvi_4001	0.63	-1.0
4,794,089	-		Echvi_4001	0.63	+2.3
4,794,091	-		Echvi_4001	0.63	-0.4
4,794,312	+				-3.3
4,794,353	+				+3.1
4,794,354	-				+1.8
4,794,354	-				-0.9
4,794,385	+				-2.8
4,794,385	+				-2.2
4,794,436	+				+1.2
4,794,436	+				-1.3
4,794,526	+				+1.6
4,794,530	+				+4.5
4,794,530	+				-1.6
4,794,530	+				-0.0
4,794,530	+				+2.1
4,794,530	+				-0.3
4,794,531	-				+1.1
4,794,532	+				+1.4
4,794,532	+				-0.9
4,794,624	+		Echvi_4002	0.12	+0.9
4,794,629	+		Echvi_4002	0.12	+1.1
4,794,629	+		Echvi_4002	0.12	+0.1
4,794,629	+		Echvi_4002	0.12	-1.0
4,794,629	+		Echvi_4002	0.12	-0.3
4,794,630	-		Echvi_4002	0.12	+2.1
4,794,632	-		Echvi_4002	0.13	-2.6
4,794,632	-		Echvi_4002	0.13	-1.4
4,794,636	+		Echvi_4002	0.13	+1.6
4,794,646	+		Echvi_4002	0.14	+0.5
4,794,646	+		Echvi_4002	0.14	+0.3
4,794,646	+		Echvi_4002	0.14	-2.0
4,794,647	-		Echvi_4002	0.14	-3.3
4,794,647	-		Echvi_4002	0.14	-1.3
4,794,647	-		Echvi_4002	0.14	+1.0
4,794,647	-		Echvi_4002	0.14	-1.2
4,794,693	-		Echvi_4002	0.20	-1.0
4,794,693	-		Echvi_4002	0.20	-3.1
4,794,697	+		Echvi_4002	0.20	-0.9
4,794,698	-		Echvi_4002	0.21	+0.0
4,794,727	-		Echvi_4002	0.24	+0.6
4,794,740	+		Echvi_4002	0.26	-1.3
4,794,740	+		Echvi_4002	0.26	-2.2
4,794,772	+		Echvi_4002	0.29	+1.4
4,794,772	+		Echvi_4002	0.29	+0.9
4,794,778	+		Echvi_4002	0.30	-0.7
4,794,813	-		Echvi_4002	0.34	-2.0
4,794,831	-		Echvi_4002	0.36	+0.6
4,794,852	+		Echvi_4002	0.39	+2.7
4,794,895	+		Echvi_4002	0.44	-0.7
4,794,901	+		Echvi_4002	0.45	+0.3
4,794,901	+		Echvi_4002	0.45	+2.7
4,794,901	+		Echvi_4002	0.45	-1.0
4,794,948	-		Echvi_4002	0.50	-1.4
4,794,951	-		Echvi_4002	0.51	+0.8
4,794,961	+		Echvi_4002	0.52	-0.4
4,794,965	+		Echvi_4002	0.52	-2.6
4,794,965	+		Echvi_4002	0.52	-1.9
4,794,965	+		Echvi_4002	0.52	-2.1
4,794,966	-		Echvi_4002	0.52	-2.1
4,794,966	-		Echvi_4002	0.52	-1.2
4,794,966	-		Echvi_4002	0.52	-0.3
4,795,154	+		Echvi_4002	0.75	-0.0
4,795,155	-		Echvi_4002	0.75	-2.1
4,795,241	-		Echvi_4002	0.85	-1.9
4,795,275	-		Echvi_4002	0.89	-0.7
4,795,292	+				-0.2
4,795,296	+				+0.0
4,795,296	+				-1.8
4,795,296	+				+0.6
4,795,297	-				+0.3
4,795,300	-				-0.1
4,795,314	-				+0.0
4,795,369	+				+0.2
4,795,369	+				+0.3
4,795,369	+				-1.9
4,795,369	+				+0.5
4,795,369	+				+0.7
4,795,369	+				+1.0
4,795,370	-				+0.4
4,795,409	+				-0.1
4,795,451	+				-1.0
4,795,453	+				+2.1
4,795,483	+				-0.7
4,795,483	+				+0.0
4,795,483	+				-0.9
4,795,513	+				+1.2
4,795,513	+				+1.8
4,795,513	+				-2.1
4,795,513	+				-0.0
4,795,513	+				-2.9
4,795,514	-				+0.5
4,795,524	+				-1.0
4,795,524	+				-0.1
4,795,524	+				+2.3
4,795,526	+				-1.4
4,795,526	+				+2.4
4,795,571	+				-1.3
4,795,571	+				-0.1
4,795,571	+				-2.2
4,795,572	-				-1.3
4,795,583	-				-2.5
4,795,583	-				-1.5
4,795,623	-				-3.3
4,795,623	-				-2.6
4,795,743	-		Echvi_4003	0.26	-2.0
4,795,760	-		Echvi_4003	0.28	-0.4
4,795,766	-		Echvi_4003	0.29	-1.9
4,795,810	-		Echvi_4003	0.35	+1.0
4,795,830	+		Echvi_4003	0.38	+2.3
4,795,849	-		Echvi_4003	0.41	-0.5
4,795,850	+		Echvi_4003	0.41	-2.7
4,795,858	+		Echvi_4003	0.42	+0.6
4,795,859	-		Echvi_4003	0.43	+0.1
4,795,859	-		Echvi_4003	0.43	+0.2
4,795,923	+		Echvi_4003	0.52	+0.5
4,795,923	+		Echvi_4003	0.52	-0.2
4,795,924	-		Echvi_4003	0.52	-0.2
4,795,997	+		Echvi_4003	0.62	+0.5
4,796,010	+		Echvi_4003	0.64	-0.7
4,796,124	-		Echvi_4003	0.81	+1.3
4,796,127	-		Echvi_4003	0.81	-1.3
4,796,169	+		Echvi_4003	0.87	+1.4
4,796,169	+		Echvi_4003	0.87	-2.6
4,796,174	+		Echvi_4003	0.88	-2.1
4,796,185	+		Echvi_4003	0.90	-0.6
4,796,188	-				-1.3
4,796,217	-				-2.1
4,796,217	-				-1.7
4,796,269	+				-0.2
4,796,269	+				+0.4
4,796,310	-				-0.0
4,796,337	+				+0.3
4,796,337	+				+0.9
4,796,357	-				+2.4