Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4001

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,792,820	+		Echvi_4000	0.19	-1.2
4,792,873	+		Echvi_4000	0.25	-0.2
4,792,923	-		Echvi_4000	0.31	-0.1
4,792,923	-		Echvi_4000	0.31	-1.7
4,792,932	+		Echvi_4000	0.32	+0.2
4,792,932	+		Echvi_4000	0.32	+0.7
4,792,943	-		Echvi_4000	0.33	+1.1
4,792,943	-		Echvi_4000	0.33	-1.7
4,793,084	+		Echvi_4000	0.49	-2.1
4,793,093	+		Echvi_4000	0.50	+0.1
4,793,093	+		Echvi_4000	0.50	-0.1
4,793,250	-		Echvi_4000	0.68	+1.1
4,793,286	+		Echvi_4000	0.72	-1.0
4,793,287	-		Echvi_4000	0.72	+0.3
4,793,326	-		Echvi_4000	0.77	+0.6
4,793,360	+		Echvi_4000	0.81	+1.7
4,793,361	-		Echvi_4000	0.81	+1.9
4,793,370	-		Echvi_4000	0.82	-0.9
4,793,370	-		Echvi_4000	0.82	-0.7
4,793,450	+				+0.9
4,793,467	-				+2.4
4,793,467	-				-0.2
4,793,612	+				+1.0
4,793,616	+				-2.2
4,793,616	+				+1.8
4,793,616	+				-1.6
4,793,639	+				-2.6
4,793,639	+				-2.0
4,793,639	+				+0.7
4,793,643	-				-2.1
4,793,645	+				-0.3
4,793,645	+				+0.3
4,793,645	+				+0.7
4,793,646	-				-2.1
4,793,646	-				+2.1
4,793,665	-				+0.1
4,793,689	-				-0.5
4,793,717	+				-0.1
4,793,717	+				-1.5
4,793,735	+				+2.0
4,793,735	+				+1.8
4,793,751	+				-1.0
4,793,772	-				-0.5
4,793,774	+				-0.6
4,793,775	-				-0.5
4,793,775	-				+0.7
4,793,775	-				-1.6
4,793,775	-				-1.3
4,793,775	-				-1.0
4,793,865	-		Echvi_4001	0.18	-1.7
4,793,879	+		Echvi_4001	0.21	-1.5
4,793,879	+		Echvi_4001	0.21	-1.5
4,793,879	+		Echvi_4001	0.21	+0.2
4,793,880	-		Echvi_4001	0.21	-1.7
4,793,880	-		Echvi_4001	0.21	-0.4
4,793,880	-		Echvi_4001	0.21	+0.7
4,793,880	-		Echvi_4001	0.21	-0.5
4,793,883	+		Echvi_4001	0.22	-1.1
4,793,884	-		Echvi_4001	0.22	-1.2
4,794,024	+		Echvi_4001	0.50	-2.6
4,794,024	+		Echvi_4001	0.50	-2.0
4,794,088	+		Echvi_4001	0.62	+0.3
4,794,088	+		Echvi_4001	0.62	+1.0
4,794,089	-		Echvi_4001	0.63	-1.0
4,794,089	-		Echvi_4001	0.63	+2.3
4,794,091	-		Echvi_4001	0.63	-0.4
4,794,312	+				-3.3
4,794,353	+				+3.1
4,794,354	-				+1.8
4,794,354	-				-0.9
4,794,385	+				-2.8
4,794,385	+				-2.2
4,794,436	+				+1.2
4,794,436	+				-1.3
4,794,526	+				+1.6
4,794,530	+				+4.5
4,794,530	+				-1.6
4,794,530	+				-0.0
4,794,530	+				+2.1
4,794,530	+				-0.3
4,794,531	-				+1.1
4,794,532	+				+1.4
4,794,532	+				-0.9
4,794,624	+		Echvi_4002	0.12	+0.9
4,794,629	+		Echvi_4002	0.12	+1.1
4,794,629	+		Echvi_4002	0.12	+0.1
4,794,629	+		Echvi_4002	0.12	-1.0
4,794,629	+		Echvi_4002	0.12	-0.3
4,794,630	-		Echvi_4002	0.12	+2.1
4,794,632	-		Echvi_4002	0.13	-2.6
4,794,632	-		Echvi_4002	0.13	-1.4
4,794,636	+		Echvi_4002	0.13	+1.6
4,794,646	+		Echvi_4002	0.14	+0.5
4,794,646	+		Echvi_4002	0.14	+0.3
4,794,646	+		Echvi_4002	0.14	-2.0
4,794,647	-		Echvi_4002	0.14	-3.3
4,794,647	-		Echvi_4002	0.14	-1.3
4,794,647	-		Echvi_4002	0.14	+1.0
4,794,647	-		Echvi_4002	0.14	-1.2
4,794,693	-		Echvi_4002	0.20	-1.0
4,794,693	-		Echvi_4002	0.20	-3.1
4,794,697	+		Echvi_4002	0.20	-0.9
4,794,698	-		Echvi_4002	0.21	+0.0
4,794,727	-		Echvi_4002	0.24	+0.6
4,794,740	+		Echvi_4002	0.26	-1.3
4,794,740	+		Echvi_4002	0.26	-2.2
4,794,772	+		Echvi_4002	0.29	+1.4
4,794,772	+		Echvi_4002	0.29	+0.9
4,794,778	+		Echvi_4002	0.30	-0.7
4,794,813	-		Echvi_4002	0.34	-2.0
4,794,831	-		Echvi_4002	0.36	+0.6
4,794,852	+		Echvi_4002	0.39	+2.7
4,794,895	+		Echvi_4002	0.44	-0.7
4,794,901	+		Echvi_4002	0.45	+0.3
4,794,901	+		Echvi_4002	0.45	+2.7
4,794,901	+		Echvi_4002	0.45	-1.0
4,794,948	-		Echvi_4002	0.50	-1.4
4,794,951	-		Echvi_4002	0.51	+0.8
4,794,961	+		Echvi_4002	0.52	-0.4
4,794,965	+		Echvi_4002	0.52	-2.6
4,794,965	+		Echvi_4002	0.52	-1.9
4,794,965	+		Echvi_4002	0.52	-2.1
4,794,966	-		Echvi_4002	0.52	-2.1
4,794,966	-		Echvi_4002	0.52	-1.2
4,794,966	-		Echvi_4002	0.52	-0.3
4,795,154	+		Echvi_4002	0.75	-0.0
4,795,155	-		Echvi_4002	0.75	-2.1
4,795,241	-		Echvi_4002	0.85	-1.9
4,795,275	-		Echvi_4002	0.89	-0.7