Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3993

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,788,409	+				-2.3
4,788,430	-				-1.4
4,788,467	+				-0.7
4,788,543	+		Echvi_3992	0.12	-1.4
4,788,635	+		Echvi_3992	0.21	-1.5
4,788,640	+		Echvi_3992	0.22	-0.1
4,788,670	+		Echvi_3992	0.25	+0.3
4,788,670	+		Echvi_3992	0.25	+0.5
4,788,671	-		Echvi_3992	0.25	+0.2
4,788,676	-		Echvi_3992	0.26	+1.7
4,788,676	-				+0.5
4,788,679	+		Echvi_3992	0.26	-0.0
4,788,679	+		Echvi_3992	0.26	+0.7
4,788,680	-		Echvi_3992	0.26	-2.3
4,788,680	-		Echvi_3992	0.26	+0.5
4,788,680	-		Echvi_3992	0.26	-0.1
4,788,686	-		Echvi_3992	0.27	-1.5
4,788,689	+		Echvi_3992	0.27	-2.9
4,788,689	+		Echvi_3992	0.27	+1.8
4,788,690	-		Echvi_3992	0.27	+2.9
4,788,690	-		Echvi_3992	0.27	-0.4
4,788,762	-		Echvi_3992	0.34	-0.1
4,788,814	+		Echvi_3992	0.40	+1.4
4,788,839	+		Echvi_3992	0.42	-0.5
4,788,899	+		Echvi_3992	0.48	-1.0
4,788,900	-		Echvi_3992	0.49	+0.6
4,788,900	-		Echvi_3992	0.49	+0.9
4,788,921	-		Echvi_3992	0.51	+1.1
4,788,946	+		Echvi_3992	0.53	-1.3
4,788,947	-		Echvi_3992	0.53	-0.7
4,788,955	-		Echvi_3992	0.54	-0.5
4,788,955	-		Echvi_3992	0.54	+2.9
4,788,955	-		Echvi_3992	0.54	+1.2
4,788,955	-		Echvi_3992	0.54	-3.5
4,788,966	-		Echvi_3992	0.55	-3.5
4,789,061	+		Echvi_3992	0.65	-2.8
4,789,061	+		Echvi_3992	0.65	-2.0
4,789,061	+		Echvi_3992	0.65	-1.0
4,789,062	-		Echvi_3992	0.65	-3.0
4,789,110	+		Echvi_3992	0.70	-0.9
4,789,111	-		Echvi_3992	0.70	-0.4
4,789,142	+		Echvi_3992	0.73	+1.2
4,789,142	+		Echvi_3992	0.73	-1.7
4,789,143	-		Echvi_3992	0.73	-0.7
4,789,143	-		Echvi_3992	0.73	-0.2
4,789,143	-		Echvi_3992	0.73	+0.8
4,789,174	-		Echvi_3992	0.77	+1.4
4,789,258	+		Echvi_3992	0.85	-0.8
4,789,259	-		Echvi_3992	0.85	+0.3
4,789,264	+		Echvi_3992	0.86	+0.4
4,789,366	+				-2.0
4,789,437	+				+0.4
4,789,437	+				-1.0
4,789,500	-		Echvi_3993	0.13	+1.8
4,789,502	-		Echvi_3993	0.13	-2.3
4,789,575	+		Echvi_3993	0.23	+0.3
4,789,575	+		Echvi_3993	0.23	-1.3
4,789,575	+		Echvi_3993	0.23	+0.2
4,789,575	+		Echvi_3993	0.23	+0.5
4,789,575	+		Echvi_3993	0.23	-1.3
4,789,576	-		Echvi_3993	0.23	+1.5
4,789,768	+		Echvi_3993	0.49	-0.9
4,789,876	+		Echvi_3993	0.64	-2.6
4,789,877	-		Echvi_3993	0.64	+1.0
4,789,936	-		Echvi_3993	0.72	+2.6
4,789,952	+		Echvi_3993	0.74	+1.3
4,789,999	-		Echvi_3993	0.80	+0.7
4,790,037	+				-0.5
4,790,038	-		Echvi_3993	0.85	-1.4
4,790,100	-				+1.8
4,790,103	+				+1.7
4,790,133	-				+0.1
4,790,167	+				-0.5
4,790,168	-				+1.6
4,790,168	-				+2.4
4,790,177	+				-1.3
4,790,183	+				+0.2
4,790,184	-				-0.6
4,790,184	-				-0.3
4,790,243	+		Echvi_3994	0.12	-2.0
4,790,325	+		Echvi_3994	0.22	+1.3
4,790,474	+		Echvi_3994	0.39	+2.9
4,790,474	+		Echvi_3994	0.39	-0.2
4,790,495	+		Echvi_3994	0.42	+0.6
4,790,495	+		Echvi_3994	0.42	-1.5
4,790,581	-		Echvi_3994	0.52	+0.7
4,790,608	+		Echvi_3994	0.55	+1.4
4,790,608	+		Echvi_3994	0.55	-0.3
4,790,608	+		Echvi_3994	0.55	+2.9
4,790,736	+		Echvi_3994	0.70	-3.2
4,790,742	+		Echvi_3994	0.70	+1.3
4,790,743	-		Echvi_3994	0.70	+1.8
4,790,757	+		Echvi_3994	0.72	+0.5
4,790,758	-		Echvi_3994	0.72	-0.2
4,790,765	+		Echvi_3994	0.73	-2.3
4,790,771	+		Echvi_3994	0.74	-2.2
4,790,771	+		Echvi_3994	0.74	-0.0
4,790,772	-		Echvi_3994	0.74	-0.3
4,790,772	-		Echvi_3994	0.74	+2.7
4,790,772	-		Echvi_3994	0.74	+2.1
4,790,772	-		Echvi_3994	0.74	+0.5
4,790,774	-		Echvi_3994	0.74	-4.4
4,790,822	+		Echvi_3994	0.80	-0.5
4,790,862	+		Echvi_3994	0.84	-2.3
4,790,868	+		Echvi_3994	0.85	+0.9
4,790,885	+		Echvi_3994	0.87	-0.4
4,790,885	+		Echvi_3994	0.87	+0.0
4,790,888	-		Echvi_3994	0.87	+0.1
4,790,889	+		Echvi_3994	0.87	-0.4
4,790,889	+		Echvi_3994	0.87	+1.6
4,790,890	-		Echvi_3994	0.87	-0.6
4,790,890	-		Echvi_3994	0.87	+2.7
4,790,890	-		Echvi_3994	0.87	+2.4
4,790,920	+				-0.2
4,790,921	-				+0.5
4,790,921	-				-1.8
4,790,921	-				+0.3
4,790,938	+				-0.7
4,790,938	+				+0.3
4,790,942	+				-0.5
4,790,943	-				+1.3
4,790,943	-				-0.5
4,790,943	-				-3.0
4,790,943	-				-1.3
4,790,954	+				-1.3
4,790,955	-				-1.9
4,790,979	+				-1.9
4,790,980	-				-1.5
4,791,067	-		Echvi_3995	0.61	-0.5
4,791,078	+		Echvi_3995	0.73	+2.5
4,791,078	+		Echvi_3995	0.73	-2.2
4,791,095	-				+1.8
4,791,095	-				+0.2
4,791,126	+				-1.3
4,791,137	+				+0.2
4,791,137	+				-1.9