Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3919

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,692,091	+				+3.1
4,692,092	-				-1.0
4,692,125	-				-2.3
4,692,146	-				+2.0
4,692,188	-				-1.4
4,692,203	-				-2.0
4,692,206	-				-0.1
4,692,216	-				-1.1
4,692,233	+				-2.3
4,692,233	+				+0.4
4,692,239	+				+1.0
4,692,362	-				-2.8
4,692,389	+				+0.7
4,692,389	+				-0.3
4,692,390	-				+1.2
4,692,390	-				+1.1
4,692,390	-				+1.9
4,692,390	-				-1.1
4,692,487	+				-1.3
4,692,488	-				-3.2
4,692,519	+				+1.0
4,692,520	-				-2.5
4,692,550	+				-2.6
4,692,551	-				-1.0
4,692,556	+				-2.4
4,692,557	-				-2.6
4,692,565	+				-2.5
4,692,566	-				-2.1
4,692,572	-				+0.6
4,692,600	+		Echvi_3918	0.16	-2.8
4,692,829	+				+0.8
4,692,830	-				-0.9
4,692,843	+				+1.1
4,692,843	+				+0.4
4,692,851	+				+0.1
4,692,851	+				+1.4
4,692,853	+				+0.4
4,692,853	+				+1.8
4,692,896	-				-1.2
4,692,956	+				-1.3
4,692,964	+				+0.4
4,693,007	-				+1.1
4,693,025	+		Echvi_3919	0.12	+0.3
4,693,025	+		Echvi_3919	0.12	+2.1
4,693,078	+		Echvi_3919	0.19	+1.2
4,693,096	+		Echvi_3919	0.22	+1.3
4,693,097	-		Echvi_3919	0.22	-0.9
4,693,097	-		Echvi_3919	0.22	-2.4
4,693,097	-		Echvi_3919	0.22	-2.2
4,693,097	-		Echvi_3919	0.22	+1.2
4,693,097	-		Echvi_3919	0.22	-2.5
4,693,106	+		Echvi_3919	0.23	-0.5
4,693,107	-		Echvi_3919	0.23	-2.0
4,693,118	+		Echvi_3919	0.25	-1.2
4,693,119	-		Echvi_3919	0.25	-0.0
4,693,119	-		Echvi_3919	0.25	+2.1
4,693,205	+		Echvi_3919	0.37	-2.0
4,693,206	-		Echvi_3919	0.37	+1.2
4,693,242	+		Echvi_3919	0.43	+0.2
4,693,242	+		Echvi_3919	0.43	-3.6
4,693,243	-		Echvi_3919	0.43	-0.7
4,693,287	+		Echvi_3919	0.49	+0.3
4,693,305	-		Echvi_3919	0.52	-2.7
4,693,381	-		Echvi_3919	0.63	+1.8
4,693,381	-		Echvi_3919	0.63	+0.2
4,693,427	-		Echvi_3919	0.69	+1.7
4,693,433	+		Echvi_3919	0.70	-2.0
4,693,434	-		Echvi_3919	0.70	-1.2
4,693,434	-		Echvi_3919	0.70	+3.7
4,693,434	-		Echvi_3919	0.70	-0.9
4,693,434	-		Echvi_3919	0.70	-1.2
4,693,456	-		Echvi_3919	0.73	+1.1
4,693,542	-		Echvi_3919	0.86	-0.3
4,693,599	+				-1.9
4,693,626	+				+2.1
4,693,642	+				+1.1
4,693,642	+				+3.3
4,693,642	+				+0.6
4,693,644	+				-2.1
4,693,644	+				-2.5
4,693,644	+				-2.7
4,693,646	+				-0.7
4,693,646	+				+0.2
4,693,647	-				+0.8
4,693,651	-				+0.4
4,693,703	+				-1.5
4,693,704	-				-3.3
4,693,706	+				-2.3
4,693,707	-				+1.0
4,693,711	+				-1.4
4,693,712	-				+1.6
4,693,712	-				+0.4
4,693,762	+				+0.8
4,693,762	+				+0.5
4,693,763	-				+1.0
4,693,763	-				-2.0
4,693,763	-				-2.7
4,693,768	+				-0.9
4,693,768	+				-3.0
4,693,769	-				-1.7
4,693,800	-				-2.4
4,693,847	-				-3.5
4,693,859	+				-0.9
4,693,859	+				-1.1
4,693,860	-				-0.1
4,693,864	+				+0.8
4,693,865	-				+2.3
4,693,865	-				-0.3
4,693,869	+				-2.4
4,693,870	-				+1.9
4,693,952	+				-2.0
4,693,952	+				+0.8
4,693,953	-				+0.1
4,693,955	+				-0.5
4,693,956	-				-0.5
4,693,956	-				-1.7
4,694,039	+		Echvi_3920	0.10	+1.3
4,694,040	-		Echvi_3920	0.10	+1.5
4,694,124	+		Echvi_3920	0.15	+1.2
4,694,125	-		Echvi_3920	0.15	+0.4
4,694,127	+		Echvi_3920	0.15	-0.4
4,694,128	-		Echvi_3920	0.15	-1.7
4,694,128	-		Echvi_3920	0.15	-0.9
4,694,139	+		Echvi_3920	0.16	-1.5
4,694,152	-		Echvi_3920	0.17	+0.1
4,694,152	-		Echvi_3920	0.17	+2.1
4,694,152	-		Echvi_3920	0.17	+3.2
4,694,152	-		Echvi_3920	0.17	-2.5
4,694,282	-		Echvi_3920	0.24	-1.6
4,694,372	-		Echvi_3920	0.29	-3.3
4,694,372	-		Echvi_3920	0.29	+0.6
4,694,372	-		Echvi_3920	0.29	-2.7
4,694,396	+		Echvi_3920	0.30	-2.3
4,694,396	+		Echvi_3920	0.30	-1.6
4,694,397	-		Echvi_3920	0.30	-0.4
4,694,408	+		Echvi_3920	0.31	-0.1
4,694,409	-		Echvi_3920	0.31	-3.1
4,694,437	+		Echvi_3920	0.33	-2.3
4,694,437	+		Echvi_3920	0.33	-1.6
4,694,438	-		Echvi_3920	0.33	+0.7
4,694,470	-		Echvi_3920	0.35	+2.1
4,694,527	+		Echvi_3920	0.38	+0.4
4,694,528	-		Echvi_3920	0.38	+2.0
4,694,541	+		Echvi_3920	0.39	+1.4
4,694,553	+		Echvi_3920	0.39	-2.1
4,694,553	+		Echvi_3920	0.39	-1.7
4,694,554	-		Echvi_3920	0.39	-1.0
4,694,554	-		Echvi_3920	0.39	-0.3
4,694,555	+		Echvi_3920	0.39	+1.5
4,694,556	-		Echvi_3920	0.39	-2.1
4,694,588	+		Echvi_3920	0.41	-1.6
4,694,588	+		Echvi_3920	0.41	-1.8
4,694,589	-		Echvi_3920	0.41	+1.1
4,694,589	-		Echvi_3920	0.41	-1.6
4,694,617	-		Echvi_3920	0.43	+1.6