Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3806

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,541,566	+				-2.3
4,541,589	+				-1.8
4,541,618	+				+0.1
4,541,621	-				+0.1
4,541,678	-		Echvi_3805	0.16	+0.2
4,541,678	-		Echvi_3805	0.16	-0.4
4,541,838	-		Echvi_3805	0.38	+1.2
4,541,838	-		Echvi_3805	0.38	-0.4
4,541,838	-		Echvi_3805	0.38	+1.1
4,542,094	-		Echvi_3805	0.74	-1.3
4,542,094	-		Echvi_3805	0.74	+2.4
4,542,117	+		Echvi_3805	0.77	-0.0
4,542,199	-		Echvi_3805	0.89	-0.1
4,542,261	+				-2.1
4,542,261	+				-1.4
4,542,303	+				+0.1
4,542,303	+				+0.6
4,542,303	+				-1.1
4,542,345	+				+0.7
4,542,345	+				-0.8
4,542,579	+				+1.5
4,542,580	-				+1.1
4,542,638	+				-0.8
4,542,640	+				+1.0
4,542,668	+				-1.0
4,542,696	+				-2.5
4,542,696	+				+2.2
4,542,696	+				+1.8
4,542,696	+				+0.3
4,542,696	+				-1.2
4,542,703	-				-2.1
4,542,703	-				-2.3
4,542,703	-				+0.9
4,542,727	+				+0.7
4,542,780	-		Echvi_3806	0.13	+0.6
4,542,788	-		Echvi_3806	0.13	+0.7
4,542,946	+		Echvi_3806	0.22	+1.4
4,542,947	-		Echvi_3806	0.22	+1.9
4,542,947	-		Echvi_3806	0.22	+1.2
4,542,951	-		Echvi_3806	0.23	+1.8
4,543,002	-		Echvi_3806	0.26	+0.5
4,543,002	-		Echvi_3806	0.26	+2.3
4,543,002	-		Echvi_3806	0.26	-1.3
4,543,002	-		Echvi_3806	0.26	-1.5
4,543,005	+		Echvi_3806	0.26	+1.3
4,543,070	+		Echvi_3806	0.29	-0.7
4,543,072	+		Echvi_3806	0.30	-1.9
4,543,072	+		Echvi_3806	0.30	+0.5
4,543,073	-		Echvi_3806	0.30	+1.1
4,543,073	-		Echvi_3806	0.30	+0.2
4,543,073	-		Echvi_3806	0.30	+0.1
4,543,077	-		Echvi_3806	0.30	+0.8
4,543,138	+		Echvi_3806	0.33	+0.7
4,543,139	-		Echvi_3806	0.33	-0.3
4,543,169	-		Echvi_3806	0.35	+0.5
4,543,169	-		Echvi_3806	0.35	-1.8
4,543,171	-		Echvi_3806	0.35	-0.2
4,543,251	+		Echvi_3806	0.40	+0.9
4,543,251	+		Echvi_3806	0.40	-3.7
4,543,252	-		Echvi_3806	0.40	+0.2
4,543,303	-		Echvi_3806	0.43	+0.7
4,543,316	+		Echvi_3806	0.44	+1.3
4,543,385	-		Echvi_3806	0.48	+0.6
4,543,403	+		Echvi_3806	0.49	-1.1
4,543,437	-		Echvi_3806	0.51	-1.5
4,543,468	+		Echvi_3806	0.52	+0.9
4,543,469	-		Echvi_3806	0.53	-1.4
4,543,469	-		Echvi_3806	0.53	-2.6
4,543,469	-		Echvi_3806	0.53	+1.8
4,543,469	-		Echvi_3806	0.53	+0.5
4,543,469	-		Echvi_3806	0.53	-0.9
4,543,472	+		Echvi_3806	0.53	-2.7
4,543,472	+		Echvi_3806	0.53	-0.9
4,543,472	+		Echvi_3806	0.53	+1.7
4,543,472	+		Echvi_3806	0.53	-0.3
4,543,472	+		Echvi_3806	0.53	+0.3
4,543,473	-		Echvi_3806	0.53	+0.1
4,543,606	+		Echvi_3806	0.60	+0.4
4,543,607	-		Echvi_3806	0.61	+0.7
4,543,607	-		Echvi_3806	0.61	+1.1
4,543,721	-		Echvi_3806	0.67	-2.9
4,543,721	-		Echvi_3806	0.67	-0.8
4,543,912	-		Echvi_3806	0.78	+0.1
4,543,936	+		Echvi_3806	0.80	+0.9
4,543,936	+		Echvi_3806	0.80	+0.7
4,543,937	-		Echvi_3806	0.80	+2.1
4,543,943	-		Echvi_3806	0.80	+0.5
4,543,953	-		Echvi_3806	0.81	-1.6
4,543,968	+		Echvi_3806	0.81	-0.0
4,543,981	-		Echvi_3806	0.82	+0.1
4,543,981	-		Echvi_3806	0.82	+2.9
4,543,981	-		Echvi_3806	0.82	+0.6
4,543,981	-		Echvi_3806	0.82	+2.8
4,544,010	+		Echvi_3806	0.84	+0.0
4,544,048	-		Echvi_3806	0.86	-2.6
4,544,096	+		Echvi_3806	0.89	-1.4
4,544,140	+				-1.5
4,544,172	+				-3.0
4,544,193	+				+0.1
4,544,193	+				-0.1
4,544,193	+				+1.5
4,544,242	+				+0.9
4,544,294	+				+0.6
4,544,449	+				-2.0
4,544,599	+				-0.2
4,544,603	+				+2.0
4,544,603	+				+0.3
4,544,603	+				-1.9
4,544,606	+				+1.1
4,544,606	+				+2.3
4,544,611	+				-1.9
4,544,611	+				-1.8
4,544,611	+				-1.3
4,544,611	+				-0.9
4,544,611	+				-1.6
4,544,614	+				-2.3
4,544,614	+				+1.2
4,544,614	+				-2.7
4,544,614	+				+0.1
4,544,614	+				-3.0
4,544,614	+				-0.8
4,544,614	+				-2.9
4,544,618	+				+3.4
4,544,618	+				-0.8
4,544,656	-				-0.8
4,544,694	+				+1.8
4,544,703	+				-1.9
4,544,812	-		Echvi_3807	0.22	-0.8
4,544,816	+		Echvi_3807	0.23	+0.3
4,544,821	+		Echvi_3807	0.23	-2.3
4,544,861	-		Echvi_3807	0.28	-0.5
4,544,893	+		Echvi_3807	0.31	+1.9
4,544,893	+		Echvi_3807	0.31	+0.5
4,544,894	-		Echvi_3807	0.31	-2.8
4,544,894	-		Echvi_3807	0.31	-0.3
4,544,894	-		Echvi_3807	0.31	-2.0
4,545,142	+		Echvi_3807	0.59	+0.1
4,545,142	+		Echvi_3807	0.59	-0.8
4,545,189	+		Echvi_3807	0.65	-0.9
4,545,281	+		Echvi_3807	0.75	-1.2
4,545,281	+		Echvi_3807	0.75	-0.3
4,545,281	+		Echvi_3807	0.75	-0.9
4,545,282	-		Echvi_3807	0.75	-0.9