Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3748

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,462,720	+				-2.3
4,462,768	+		Echvi_3747	0.12	-1.5
4,462,768	+		Echvi_3747	0.12	+0.5
4,462,768	+		Echvi_3747	0.12	-0.7
4,462,769	-		Echvi_3747	0.12	+0.9
4,462,769	-		Echvi_3747	0.12	-1.1
4,462,774	+		Echvi_3747	0.12	+0.1
4,462,775	-		Echvi_3747	0.12	+0.6
4,462,775	-		Echvi_3747	0.12	-2.4
4,462,796	-		Echvi_3747	0.14	+1.8
4,462,845	-		Echvi_3747	0.19	-0.4
4,462,849	-		Echvi_3747	0.20	-1.9
4,462,930	+		Echvi_3747	0.28	+0.1
4,462,931	-		Echvi_3747	0.28	+0.5
4,462,950	+		Echvi_3747	0.30	+0.1
4,462,951	-		Echvi_3747	0.30	+0.9
4,462,953	+		Echvi_3747	0.30	-3.3
4,462,953	+		Echvi_3747	0.30	-1.0
4,462,953	+		Echvi_3747	0.30	+0.6
4,462,954	-		Echvi_3747	0.30	+2.3
4,462,954	-		Echvi_3747	0.30	-0.6
4,462,954	-		Echvi_3747	0.30	-2.7
4,462,954	-		Echvi_3747	0.30	+0.9
4,462,954	-		Echvi_3747	0.30	+0.1
4,462,954	-		Echvi_3747	0.30	-3.2
4,462,954	-		Echvi_3747	0.30	+4.0
4,462,954	-		Echvi_3747	0.30	-0.4
4,462,954	-		Echvi_3747	0.30	-0.6
4,462,955	+		Echvi_3747	0.31	-0.3
4,462,956	-		Echvi_3747	0.31	+0.6
4,462,956	-		Echvi_3747	0.31	+0.8
4,463,043	+		Echvi_3747	0.39	-3.1
4,463,043	+		Echvi_3747	0.39	-1.1
4,463,043	+		Echvi_3747	0.39	+2.3
4,463,044	-		Echvi_3747	0.39	+2.4
4,463,044	-		Echvi_3747	0.39	+2.1
4,463,051	+		Echvi_3747	0.40	+3.1
4,463,052	-		Echvi_3747	0.40	+1.6
4,463,053	+		Echvi_3747	0.40	-1.4
4,463,054	-		Echvi_3747	0.41	+1.7
4,463,054	-		Echvi_3747	0.41	-2.4
4,463,054	-		Echvi_3747	0.41	-1.4
4,463,054	-		Echvi_3747	0.41	+1.1
4,463,054	-		Echvi_3747	0.41	-0.1
4,463,054	-		Echvi_3747	0.41	+0.1
4,463,054	-		Echvi_3747	0.41	+0.2
4,463,054	-		Echvi_3747	0.41	+2.2
4,463,054	-		Echvi_3747	0.41	-0.3
4,463,054	-		Echvi_3747	0.41	-3.7
4,463,054	-		Echvi_3747	0.41	+3.6
4,463,058	+		Echvi_3747	0.41	+2.1
4,463,058	+		Echvi_3747	0.41	-1.4
4,463,110	+		Echvi_3747	0.46	-0.7
4,463,142	+		Echvi_3747	0.49	+1.3
4,463,161	-		Echvi_3747	0.51	-1.9
4,463,239	-		Echvi_3747	0.59	-1.7
4,463,261	-		Echvi_3747	0.61	+0.9
4,463,349	+		Echvi_3747	0.70	+2.2
4,463,350	-		Echvi_3747	0.70	-2.1
4,463,426	+		Echvi_3747	0.78	-1.1
4,463,509	+		Echvi_3747	0.86	+1.3
4,463,510	-		Echvi_3747	0.87	+0.3
4,463,576	-				-0.5
4,463,632	+				+0.1
4,463,632	+				-1.3
4,463,633	-				-1.9
4,463,640	+				-2.2
4,463,664	-				-1.6
4,463,695	-				-0.7
4,463,695	-				-1.4
4,463,703	+				+1.8
4,463,704	-				-0.7
4,463,705	+				-3.1
4,463,705	+				-2.3
4,463,705	+				+0.6
4,463,705	+				+1.3
4,463,705	+				+0.4
4,463,705	+				-1.3
4,463,705	+				-0.8
4,463,705	+				+2.8
4,463,705	+				+1.7
4,463,705	+				-1.6
4,463,705	+				+3.4
4,463,705	+				-0.3
4,463,705	+				+1.5
4,463,706	-				+1.1
4,463,706	-				-0.5
4,463,706	-				+0.4
4,463,751	+				+0.6
4,463,752	-				-0.9
4,463,780	-				+0.7
4,463,817	+				-1.5
4,463,818	-				-0.4
4,463,848	+				+1.1
4,463,848	+				-2.6
4,463,848	+				-2.8
4,463,848	+				-2.6
4,463,848	+				-0.5
4,463,848	+				-0.6
4,463,927	+		Echvi_3748	0.12	-1.6
4,463,927	+		Echvi_3748	0.12	+1.7
4,463,928	-		Echvi_3748	0.12	+0.8
4,463,928	-		Echvi_3748	0.12	-3.0
4,463,932	+		Echvi_3748	0.12	+0.4
4,463,932	+		Echvi_3748	0.12	+3.8
4,464,009	+		Echvi_3748	0.17	+1.9
4,464,014	+		Echvi_3748	0.17	+0.5
4,464,062	-		Echvi_3748	0.20	-0.9
4,464,063	+		Echvi_3748	0.20	+2.2
4,464,063	+		Echvi_3748	0.20	+1.7
4,464,064	-		Echvi_3748	0.20	+1.7
4,464,064	-		Echvi_3748	0.20	-1.4
4,464,271	-		Echvi_3748	0.32	+0.4
4,464,271	-		Echvi_3748	0.32	-1.8
4,464,423	+		Echvi_3748	0.40	+0.9
4,464,437	-		Echvi_3748	0.41	+3.0
4,464,544	+		Echvi_3748	0.47	-1.4
4,464,643	-		Echvi_3748	0.53	-2.0
4,464,703	+		Echvi_3748	0.56	+1.4
4,464,703	+		Echvi_3748	0.56	+0.8
4,464,850	-		Echvi_3748	0.64	-1.0
4,464,876	-		Echvi_3748	0.66	-1.1
4,464,894	+		Echvi_3748	0.67	-0.0
4,464,894	+		Echvi_3748	0.67	+1.1
4,464,894	+		Echvi_3748	0.67	+0.2
4,464,894	+		Echvi_3748	0.67	-1.9
4,464,901	+		Echvi_3748	0.67	-0.5
4,464,901	+		Echvi_3748	0.67	-1.9
4,464,903	+		Echvi_3748	0.67	+2.6
4,464,903	+		Echvi_3748	0.67	+1.4
4,464,904	-		Echvi_3748	0.68	+0.8
4,464,919	-		Echvi_3748	0.68	+1.7
4,464,987	+		Echvi_3748	0.72	+3.3
4,464,987	+		Echvi_3748	0.72	+0.3
4,464,987	+		Echvi_3748	0.72	+1.1
4,464,987	+		Echvi_3748	0.72	-3.9
4,464,988	-		Echvi_3748	0.72	+2.4
4,464,988	-		Echvi_3748	0.72	-2.3
4,464,989	+		Echvi_3748	0.72	-2.8
4,464,990	-		Echvi_3748	0.72	+1.1
4,464,990	-		Echvi_3748	0.72	+0.6
4,464,990	-		Echvi_3748	0.72	+0.5
4,464,990	-		Echvi_3748	0.72	+1.4
4,465,167	+		Echvi_3748	0.82	+1.1
4,465,411	+				+0.1
4,465,418	+				-0.4
4,465,418	+				-0.0
4,465,474	+				+1.0
4,465,474	+				+0.2
4,465,474	+				-0.9
4,465,474	+				-1.7
4,465,475	-				+3.7
4,465,479	+				+1.1
4,465,482	-				-1.9
4,465,535	+				-2.5
4,465,615	-				-0.3
4,465,699	+				+1.9
4,465,709	+				-0.9
4,465,745	+				-0.0
4,465,746	-				+0.3
4,465,748	+				+0.5
4,465,748	+				+1.6
4,465,749	-				+0.7
4,465,756	-				-1.6
4,465,756	-				-2.1
4,465,914	+		Echvi_3749	0.13	+1.1
4,465,923	+		Echvi_3749	0.13	-1.4
4,466,156	+		Echvi_3749	0.20	+1.9
4,466,167	+		Echvi_3749	0.20	+1.4
4,466,168	-		Echvi_3749	0.20	-1.9
4,466,168	-		Echvi_3749	0.20	-1.5
4,466,168	-		Echvi_3749	0.20	+0.1
4,466,415	+		Echvi_3749	0.28	-2.2
4,466,441	+		Echvi_3749	0.29	+0.8