Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3590

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,261,839	+		Echvi_3589	0.72	-3.0
4,261,839	+		Echvi_3589	0.72	+0.8
4,261,840	-		Echvi_3589	0.72	+0.5
4,261,850	+		Echvi_3589	0.73	+0.2
4,261,851	-		Echvi_3589	0.73	-0.8
4,261,955	+		Echvi_3589	0.76	+0.9
4,261,959	-		Echvi_3589	0.76	-0.5
4,262,097	+		Echvi_3589	0.80	+0.7
4,262,108	+		Echvi_3589	0.81	+0.1
4,262,112	+		Echvi_3589	0.81	+1.9
4,262,112	+		Echvi_3589	0.81	+0.4
4,262,170	+		Echvi_3589	0.82	-1.0
4,262,170	+		Echvi_3589	0.82	+1.0
4,262,170	+		Echvi_3589	0.82	+1.4
4,262,171	-		Echvi_3589	0.82	-0.8
4,262,171	-		Echvi_3589	0.82	+2.1
4,262,180	+		Echvi_3589	0.83	+0.6
4,262,180	+		Echvi_3589	0.83	+0.5
4,262,270	-		Echvi_3589	0.85	+1.5
4,262,323	+		Echvi_3589	0.87	+1.2
4,262,324	-		Echvi_3589	0.87	-2.8
4,262,352	-		Echvi_3589	0.88	+0.1
4,262,385	+		Echvi_3589	0.89	-0.2
4,262,387	+		Echvi_3589	0.89	-2.2
4,262,387	+		Echvi_3589	0.89	-2.0
4,262,394	+		Echvi_3589	0.89	+1.4
4,262,395	-		Echvi_3589	0.89	-0.6
4,262,395	-		Echvi_3589	0.89	+2.2
4,262,400	+		Echvi_3589	0.89	+0.0
4,262,401	-		Echvi_3589	0.89	+2.9
4,262,417	+		Echvi_3589	0.90	+0.1
4,262,417	+		Echvi_3589	0.90	+1.2
4,262,418	-		Echvi_3589	0.90	-0.6
4,262,418	-		Echvi_3589	0.90	+0.1
4,262,496	+				+1.0
4,262,496	+				-2.2
4,262,497	-				-1.8
4,262,497	-				+1.9
4,262,583	-				-1.2
4,262,584	+				-2.2
4,262,584	+				-0.8
4,262,585	-				-2.8
4,262,585	-				-0.6
4,262,587	+				+0.0
4,262,587	+				-0.2
4,262,587	+				+0.6
4,262,587	+				-1.7
4,262,588	-				+0.7
4,262,588	-				-0.3
4,262,588	-				+0.3
4,262,588	-				+1.1
4,262,588	-				+0.4
4,262,623	+				+0.2
4,262,718	+				-2.3
4,262,718	+				-1.0
4,262,718	+				+1.3
4,262,719	-				+0.1
4,262,719	-				-0.9
4,262,724	+				-1.2
4,262,729	+				-3.0
4,262,767	+				+0.0
4,262,768	-				-2.5
4,262,781	+				+0.9
4,262,781	+				+1.2
4,262,790	+				+2.5
4,262,790	+				+0.9
4,262,791	-				-1.2
4,262,814	+				+1.1
4,262,814	+				+1.7
4,262,814	+				+0.6
4,262,837	+				+2.4
4,262,892	+		Echvi_3590	0.21	-3.3
4,262,931	+		Echvi_3590	0.30	+2.3
4,262,931	+		Echvi_3590	0.30	-1.2
4,262,932	-		Echvi_3590	0.30	-2.2
4,262,932	-		Echvi_3590	0.30	+0.6
4,262,953	+		Echvi_3590	0.35	+0.4
4,262,970	-		Echvi_3590	0.39	-3.0
4,262,974	+		Echvi_3590	0.40	-1.9
4,262,975	-		Echvi_3590	0.41	-2.2
4,262,975	-		Echvi_3590	0.41	+0.9
4,263,003	-		Echvi_3590	0.47	+1.6
4,263,052	-		Echvi_3590	0.59	-2.9
4,263,059	+		Echvi_3590	0.61	-1.6
4,263,059	+		Echvi_3590	0.61	-2.3
4,263,063	+		Echvi_3590	0.62	+1.4
4,263,064	-		Echvi_3590	0.62	-1.5
4,263,096	+		Echvi_3590	0.70	-3.3
4,263,121	-		Echvi_3590	0.76	-1.6
4,263,214	-				-0.6
4,263,214	-				+0.4
4,263,234	+				+1.1
4,263,237	+				+0.0
4,263,237	+				-2.6
4,263,237	+				+1.9
4,263,238	-				-3.3
4,263,281	+		Echvi_3591	0.19	-0.5
4,263,281	+		Echvi_3591	0.19	+2.0
4,263,282	-		Echvi_3591	0.19	-0.8
4,263,282	-		Echvi_3591	0.19	-2.6
4,263,284	+		Echvi_3591	0.20	-1.3
4,263,285	-		Echvi_3591	0.20	-0.9
4,263,285	-		Echvi_3591	0.20	+0.0
4,263,291	+		Echvi_3591	0.22	-3.7
4,263,406	-		Echvi_3591	0.62	-0.1
4,263,488	+				+1.3
4,263,500	+				+1.5
4,263,501	-				-2.5
4,263,529	-				+2.7
4,263,532	-				+3.3
4,263,532	-				-2.1
4,263,532	-				-0.4
4,263,545	+				-0.3
4,263,618	+				-0.8
4,263,618	+				+1.8
4,263,619	-				+1.4
4,263,673	+				-0.5
4,263,695	+				-1.3
4,263,719	+				+1.0
4,263,719	+				-0.3
4,263,719	+				-1.1
4,263,719	+				-2.4
4,263,720	-				+1.0
4,263,720	-				-1.9
4,263,767	+				+2.3
4,263,768	-				+2.0
4,263,768	-				-2.7
4,263,817	+				-0.3
4,263,845	-		Echvi_3592	0.10	+0.1
4,263,892	+		Echvi_3592	0.13	-2.4
4,263,976	+		Echvi_3592	0.18	-1.4
4,264,102	+		Echvi_3592	0.25	+1.4
4,264,109	+		Echvi_3592	0.25	+1.1
4,264,139	-		Echvi_3592	0.27	+0.4
4,264,214	-		Echvi_3592	0.31	+1.0