Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3573

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,234,335	-				-0.8
4,234,335	-				-2.9
4,234,337	-				-1.1
4,234,337	-				-0.8
4,234,337	-				+1.4
4,234,400	+				-3.3
4,234,484	+				-1.0
4,234,563	-		Echvi_3573	0.16	+0.8
4,234,601	+		Echvi_3573	0.20	-0.6
4,234,617	+		Echvi_3573	0.21	-1.6
4,234,622	-		Echvi_3573	0.22	+0.5
4,234,704	+		Echvi_3573	0.30	-0.6
4,234,704	+		Echvi_3573	0.30	+2.2
4,234,705	-		Echvi_3573	0.31	-0.3
4,234,737	+		Echvi_3573	0.34	+2.2
4,234,748	+		Echvi_3573	0.35	+2.0
4,234,755	-		Echvi_3573	0.36	-1.2
4,234,765	-		Echvi_3573	0.37	+1.7
4,234,831	+		Echvi_3573	0.44	-2.2
4,234,831	+		Echvi_3573	0.44	-0.9
4,234,831	+		Echvi_3573	0.44	-2.0
4,234,832	-		Echvi_3573	0.44	-1.5
4,234,832	-		Echvi_3573	0.44	+0.4
4,234,832	-		Echvi_3573	0.44	-0.3
4,234,832	-		Echvi_3573	0.44	+3.0
4,234,832	-		Echvi_3573	0.44	-0.7
4,234,832	-		Echvi_3573	0.44	+0.1
4,234,833	+		Echvi_3573	0.44	+1.5
4,234,833	+		Echvi_3573	0.44	-0.6
4,234,834	-		Echvi_3573	0.44	-0.8
4,234,847	-		Echvi_3573	0.45	+2.6
4,234,852	-		Echvi_3573	0.46	+1.7
4,234,899	+		Echvi_3573	0.51	+0.3
4,234,899	+		Echvi_3573	0.51	-0.4
4,234,900	-		Echvi_3573	0.51	-0.6
4,234,904	+		Echvi_3573	0.51	+1.6
4,234,904	+		Echvi_3573	0.51	-0.3
4,234,904	+		Echvi_3573	0.51	+2.3
4,234,923	+		Echvi_3573	0.53	+0.6
4,234,937	+		Echvi_3573	0.55	+0.7
4,234,937	+		Echvi_3573	0.55	-3.5
4,234,937	+		Echvi_3573	0.55	-2.3
4,234,938	-		Echvi_3573	0.55	+0.5
4,234,938	-		Echvi_3573	0.55	+1.8
4,234,938	-		Echvi_3573	0.55	-1.6
4,234,938	-		Echvi_3573	0.55	-1.7
4,234,942	-		Echvi_3573	0.55	-2.4
4,234,993	+		Echvi_3573	0.61	+0.2
4,235,160	+		Echvi_3573	0.78	-2.9
4,235,160	+		Echvi_3573	0.78	+1.9
4,235,182	+		Echvi_3573	0.80	-1.7
4,235,216	+		Echvi_3573	0.84	+0.9
4,235,217	-		Echvi_3573	0.84	+0.3
4,235,261	-		Echvi_3573	0.88	+2.6
4,235,406	+				+0.8
4,235,408	+				+2.6
4,235,409	-				-2.9
4,235,441	+				+2.2
4,235,442	-				+0.3
4,235,442	-				+0.8
4,235,442	-				-1.2
4,235,443	+				+2.0
4,235,443	+				+0.9
4,235,444	-				-2.0
4,235,459	+				+0.6
4,235,459	+				-0.7
4,235,472	-				-1.0
4,235,472	-				-0.6
4,235,476	-				+0.4
4,235,476	-				-1.6
4,235,486	+				+1.9
4,235,497	+				-1.2
4,235,508	-				+0.3
4,235,517	+				+2.0
4,235,518	-				-0.6
4,235,565	+				-2.0
4,235,566	-				-0.3
4,235,573	+				-1.3
4,235,603	+				+2.3
4,235,604	-				+0.7
4,235,627	+				-0.7
4,235,777	-				-2.4
4,235,850	-				+0.2
4,235,850	-				-3.4
4,235,850	-				+0.6
4,235,940	+				-2.5
4,235,940	+				-0.0
4,235,941	-				+0.1
4,235,944	+				+0.8
4,235,944	+				-2.2
4,235,950	-				+0.2
4,235,953	-				-0.6
4,235,959	+				+1.4
4,235,959	+				-1.7
4,235,960	-				-3.3
4,235,960	-				-0.7
4,235,964	+				+0.9
4,236,032	-		Echvi_3574	0.14	-0.5
4,236,058	+		Echvi_3574	0.19	-2.3
4,236,069	-		Echvi_3574	0.21	+2.2
4,236,073	+		Echvi_3574	0.22	-0.8
4,236,074	-		Echvi_3574	0.22	+0.2
4,236,076	+		Echvi_3574	0.22	+0.8
4,236,076	+		Echvi_3574	0.22	+0.2
4,236,076	+		Echvi_3574	0.22	-0.0
4,236,078	+		Echvi_3574	0.23	+0.9
4,236,078	+		Echvi_3574	0.23	+2.7
4,236,079	-		Echvi_3574	0.23	-2.9
4,236,079	-		Echvi_3574	0.23	-2.0
4,236,082	+		Echvi_3574	0.23	-0.1
4,236,083	-		Echvi_3574	0.24	+0.7
4,236,177	+		Echvi_3574	0.42	+1.4
4,236,200	-		Echvi_3574	0.47	-0.0
4,236,256	-		Echvi_3574	0.58	-0.8
4,236,259	+		Echvi_3574	0.58	+0.9
4,236,260	-		Echvi_3574	0.59	-0.2
4,236,264	-		Echvi_3574	0.59	-1.7
4,236,264	-		Echvi_3574	0.59	+0.7
4,236,281	-		Echvi_3574	0.63	+2.8
4,236,281	-		Echvi_3574	0.63	+1.3
4,236,314	+		Echvi_3574	0.69	-2.5
4,236,315	-		Echvi_3574	0.69	+2.5
4,236,315	-		Echvi_3574	0.69	+4.3
4,236,323	-		Echvi_3574	0.71	+3.8