Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3558

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,217,170	+		Echvi_3556	0.77	+0.1
4,217,278	-		Echvi_3556	0.86	-2.0
4,217,296	+		Echvi_3556	0.88	-1.3
4,217,297	-		Echvi_3556	0.88	+1.2
4,217,308	+		Echvi_3556	0.89	+0.0
4,217,385	+				+0.4
4,217,428	-				-1.3
4,217,450	-				-2.1
4,217,469	+				+2.5
4,217,546	+		Echvi_3557	0.22	-1.8
4,217,546	+		Echvi_3557	0.22	+0.2
4,217,649	+		Echvi_3557	0.45	+0.1
4,217,728	+		Echvi_3557	0.63	-0.2
4,217,853	-				-0.3
4,217,865	+				-1.6
4,217,866	-				+1.8
4,217,874	+				+2.0
4,217,878	-				-0.4
4,217,878	-				-0.3
4,217,914	+				-0.4
4,217,916	+				+0.6
4,217,930	+				-0.8
4,217,930	+				-0.6
4,217,933	+				+0.1
4,217,934	-				+1.0
4,218,083	+				+0.6
4,218,084	-				-0.7
4,218,087	+				-0.2
4,218,087	+				+1.8
4,218,088	-				+0.1
4,218,088	-				-1.7
4,218,119	+				+2.8
4,218,143	+				+1.2
4,218,144	-				-2.2
4,218,144	-				+1.6
4,218,184	-				+0.3
4,218,184	-				-0.7
4,218,186	-				+0.4
4,218,191	+				+1.7
4,218,192	-				+1.1
4,218,208	-				-1.3
4,218,252	+				+0.7
4,218,340	+		Echvi_3558	0.16	-3.9
4,218,341	-		Echvi_3558	0.16	+1.7
4,218,470	-		Echvi_3558	0.26	-0.0
4,218,470	-		Echvi_3558	0.26	+1.7
4,218,616	+		Echvi_3558	0.37	+1.3
4,218,617	-		Echvi_3558	0.37	-2.7
4,218,647	-		Echvi_3558	0.40	-0.7
4,218,647	-		Echvi_3558	0.40	-0.3
4,218,647	-		Echvi_3558	0.40	+0.4
4,218,711	+		Echvi_3558	0.45	-1.8
4,218,711	+		Echvi_3558	0.45	+1.5
4,218,712	-		Echvi_3558	0.45	+1.3
4,218,712	-		Echvi_3558	0.45	+0.7
4,218,795	+		Echvi_3558	0.51	-0.0
4,218,795	+		Echvi_3558	0.51	-2.3
4,218,796	-		Echvi_3558	0.51	+1.6
4,218,917	+		Echvi_3558	0.61	-0.9
4,218,939	+		Echvi_3558	0.63	+1.5
4,218,951	+		Echvi_3558	0.64	+0.4
4,218,952	-		Echvi_3558	0.64	-1.5
4,218,952	-		Echvi_3558	0.64	+1.1
4,218,982	+		Echvi_3558	0.66	-3.4
4,218,983	-		Echvi_3558	0.66	-1.3
4,218,986	+		Echvi_3558	0.66	+2.2
4,219,062	+		Echvi_3558	0.72	+2.0
4,219,062	+		Echvi_3558	0.72	+0.8
4,219,067	+		Echvi_3558	0.73	-3.4
4,219,067	+		Echvi_3558	0.73	+2.0
4,219,136	+		Echvi_3558	0.78	+1.7
4,219,136	+		Echvi_3558	0.78	+0.3
4,219,136	+		Echvi_3558	0.78	+3.6
4,219,137	-		Echvi_3558	0.78	-0.2
4,219,153	-		Echvi_3558	0.79	-0.2
4,219,154	+		Echvi_3558	0.80	+1.3
4,219,154	+		Echvi_3558	0.80	+0.3
4,219,155	-		Echvi_3558	0.80	+1.6
4,219,155	-		Echvi_3558	0.80	+2.2
4,219,165	+		Echvi_3558	0.80	-0.3
4,219,165	+		Echvi_3558	0.80	-2.6
4,219,199	-		Echvi_3558	0.83	+0.8
4,219,206	-		Echvi_3558	0.84	-0.8
4,219,209	+		Echvi_3558	0.84	-0.5
4,219,210	-		Echvi_3558	0.84	-0.7
4,219,238	-		Echvi_3558	0.86	+0.7
4,219,239	+		Echvi_3558	0.86	+2.2
4,219,239	+		Echvi_3558	0.86	+1.3
4,219,242	+		Echvi_3558	0.86	+0.5
4,219,243	-		Echvi_3558	0.87	+2.6
4,219,261	-		Echvi_3558	0.88	+2.2
4,219,273	+		Echvi_3558	0.89	-0.4
4,219,278	+		Echvi_3558	0.89	-2.6
4,219,279	-		Echvi_3558	0.89	+2.5
4,219,280	+		Echvi_3558	0.89	-1.4
4,219,280	+		Echvi_3558	0.89	+1.6
4,219,280	+		Echvi_3558	0.89	-1.7
4,219,281	-		Echvi_3558	0.90	+0.8
4,219,281	-		Echvi_3558	0.90	+0.1
4,219,310	+				-2.4
4,219,327	-				-1.6
4,219,335	-				-0.2
4,219,385	+				-0.5
4,219,415	-				-3.6
4,219,438	-				-2.3
4,219,447	-				+1.7
4,219,497	-				-0.2
4,219,551	+				+2.5
4,219,552	-				-1.8
4,219,554	-				-0.0
4,219,554	-				+2.7
4,219,554	-				+1.1
4,219,554	-				+1.0
4,219,554	-				+1.0
4,219,554	-				+0.1
4,219,566	-				+1.5
4,219,566	-				-0.7
4,219,631	+		Echvi_3559	0.13	+1.2
4,219,634	+		Echvi_3559	0.14	+0.9
4,219,635	-		Echvi_3559	0.14	+0.6
4,219,666	-		Echvi_3559	0.18	-1.7
4,219,738	+		Echvi_3559	0.28	+1.9
4,219,766	-		Echvi_3559	0.32	+1.5
4,219,773	+		Echvi_3559	0.33	+0.2
4,219,774	-		Echvi_3559	0.33	+0.3
4,219,915	-		Echvi_3559	0.52	-3.0
4,219,933	+		Echvi_3559	0.55	-0.3
4,219,934	-		Echvi_3559	0.55	+1.2
4,219,934	-		Echvi_3559	0.55	-0.3
4,220,013	+		Echvi_3559	0.66	+2.2
4,220,013	+		Echvi_3559	0.66	+1.0
4,220,013	+		Echvi_3559	0.66	-2.5
4,220,013	+		Echvi_3559	0.66	+3.7
4,220,026	+				+1.8
4,220,027	-		Echvi_3559	0.68	+1.6
4,220,050	+		Echvi_3559	0.71	-1.7
4,220,056	-		Echvi_3559	0.72	+0.2
4,220,066	-		Echvi_3559	0.73	-1.6
4,220,068	+		Echvi_3559	0.73	+0.8
4,220,069	-		Echvi_3559	0.73	+1.3
4,220,069	-		Echvi_3559	0.73	-2.1
4,220,079	-		Echvi_3559	0.75	-2.0
4,220,111	+		Echvi_3559	0.79	-0.0
4,220,114	+		Echvi_3559	0.80	+2.1
4,220,115	-		Echvi_3559	0.80	-1.0
4,220,138	+		Echvi_3559	0.83	+0.3
4,220,138	+		Echvi_3559	0.83	-2.4
4,220,138	+		Echvi_3559	0.83	+0.1
4,220,139	-		Echvi_3559	0.83	+2.0
4,220,139	-		Echvi_3559	0.83	-0.2
4,220,139	-		Echvi_3559	0.83	-0.8
4,220,174	-		Echvi_3559	0.88	-0.4
4,220,194	+				+1.0
4,220,194	+				+0.9
4,220,194	+				-3.0
4,220,194	+				+1.8
4,220,194	+				-0.0
4,220,194	+				-0.0
4,220,194	+				-1.2
4,220,195	-				-0.1
4,220,197	+				-0.9
4,220,198	-				-1.2
4,220,216	+				+0.5
4,220,217	-				+1.2
4,220,230	-				+1.1
4,220,243	+				-1.2
4,220,251	+				+1.1
4,220,251	+				+0.8
4,220,276	-				+1.7
4,220,277	+				-2.0
4,220,282	+				-1.0
4,220,294	-				+1.1
4,220,315	-				+0.3
4,220,332	+				+2.3
4,220,333	-				+1.1
4,220,339	-				-2.8
4,220,341	+				-0.8
4,220,341	+				+0.7
4,220,352	+				-0.6
4,220,387	-				-0.9
4,220,387	-				-1.9