Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3556

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,215,281	+		Echvi_3555	0.48	-0.3
4,215,288	+		Echvi_3555	0.48	+2.1
4,215,365	-		Echvi_3555	0.54	+1.3
4,215,365	-		Echvi_3555	0.54	-2.5
4,215,397	-		Echvi_3555	0.56	-2.6
4,215,397	-		Echvi_3555	0.56	+1.0
4,215,406	-		Echvi_3555	0.57	-3.2
4,215,502	-		Echvi_3555	0.63	-1.3
4,215,502	-		Echvi_3555	0.63	-0.8
4,215,502	-		Echvi_3555	0.63	-0.3
4,215,502	-		Echvi_3555	0.63	+1.5
4,215,504	+		Echvi_3555	0.63	-1.5
4,215,504	+		Echvi_3555	0.63	-3.4
4,215,511	+		Echvi_3555	0.64	+1.3
4,215,511	+		Echvi_3555	0.64	-0.7
4,215,512	-		Echvi_3555	0.64	+0.2
4,215,512	-		Echvi_3555	0.64	+2.0
4,215,533	-		Echvi_3555	0.65	+3.1
4,215,533	-		Echvi_3555	0.65	-1.7
4,215,612	+		Echvi_3555	0.71	+0.5
4,215,613	-		Echvi_3555	0.71	-0.0
4,215,672	+		Echvi_3555	0.75	+1.8
4,215,672	+		Echvi_3555	0.75	-2.2
4,215,673	-		Echvi_3555	0.75	+1.7
4,215,698	-		Echvi_3555	0.77	+1.9
4,215,707	-		Echvi_3555	0.77	+0.1
4,215,750	+		Echvi_3555	0.80	-2.4
4,215,768	+		Echvi_3555	0.81	+1.0
4,215,769	-		Echvi_3555	0.81	-1.0
4,215,978	+				+2.8
4,215,989	+				-0.3
4,216,037	+				-3.4
4,216,114	+				-0.4
4,216,235	+				+0.6
4,216,240	+				+3.3
4,216,241	-				-1.3
4,216,305	-				-0.7
4,216,312	-				-0.9
4,216,357	-				-1.6
4,216,417	+		Echvi_3556	0.14	-0.1
4,216,417	+		Echvi_3556	0.14	-1.3
4,216,417	+		Echvi_3556	0.14	-1.0
4,216,471	-		Echvi_3556	0.18	-2.4
4,216,510	+		Echvi_3556	0.22	+2.4
4,216,511	-		Echvi_3556	0.22	-2.3
4,216,551	+		Echvi_3556	0.25	-2.6
4,216,598	-		Echvi_3556	0.29	-3.0
4,216,598	-		Echvi_3556	0.29	-0.3
4,216,598	-		Echvi_3556	0.29	-1.3
4,216,598	-		Echvi_3556	0.29	-0.8
4,216,664	-		Echvi_3556	0.35	-0.0
4,216,664	-		Echvi_3556	0.35	-0.3
4,216,664	-		Echvi_3556	0.35	+1.1
4,216,699	-		Echvi_3556	0.38	-3.0
4,216,714	+		Echvi_3556	0.39	+1.3
4,216,714	+		Echvi_3556	0.39	-3.0
4,216,715	-		Echvi_3556	0.39	-0.3
4,216,715	-		Echvi_3556	0.39	+0.7
4,216,746	+		Echvi_3556	0.42	+1.6
4,216,747	-		Echvi_3556	0.42	-1.7
4,216,772	+		Echvi_3556	0.44	+0.9
4,216,792	-		Echvi_3556	0.45	-0.0
4,216,823	-		Echvi_3556	0.48	-1.9
4,216,843	+		Echvi_3556	0.50	+1.0
4,216,843	+		Echvi_3556	0.50	-1.1
4,216,843	+		Echvi_3556	0.50	-1.3
4,216,844	-		Echvi_3556	0.50	+0.8
4,216,884	-		Echvi_3556	0.53	+0.1
4,216,884	-		Echvi_3556	0.53	-1.6
4,216,885	+		Echvi_3556	0.53	+0.1
4,216,886	-		Echvi_3556	0.53	-0.3
4,216,894	-		Echvi_3556	0.54	+0.4
4,216,939	+		Echvi_3556	0.58	-3.7
4,216,940	-		Echvi_3556	0.58	-0.1
4,217,015	+		Echvi_3556	0.64	+1.8
4,217,015	+		Echvi_3556	0.64	+0.7
4,217,015	+		Echvi_3556	0.64	+1.4
4,217,104	+		Echvi_3556	0.72	-0.0
4,217,105	-		Echvi_3556	0.72	+2.9
4,217,105	-		Echvi_3556	0.72	-1.4
4,217,105	-		Echvi_3556	0.72	+0.5
4,217,105	-		Echvi_3556	0.72	-1.0
4,217,125	-		Echvi_3556	0.74	+0.7
4,217,136	-		Echvi_3556	0.74	-1.5
4,217,170	+		Echvi_3556	0.77	+0.1
4,217,278	-		Echvi_3556	0.86	-2.0
4,217,296	+		Echvi_3556	0.88	-1.3
4,217,297	-		Echvi_3556	0.88	+1.2
4,217,308	+		Echvi_3556	0.89	+0.0
4,217,385	+				+0.4
4,217,428	-				-1.3
4,217,450	-				-2.1
4,217,469	+				+2.5
4,217,546	+		Echvi_3557	0.22	-1.8
4,217,546	+		Echvi_3557	0.22	+0.2
4,217,649	+		Echvi_3557	0.45	+0.1
4,217,728	+		Echvi_3557	0.63	-0.2
4,217,853	-				-0.3
4,217,865	+				-1.6
4,217,866	-				+1.8
4,217,874	+				+2.0
4,217,878	-				-0.4
4,217,878	-				-0.3
4,217,914	+				-0.4
4,217,916	+				+0.6
4,217,930	+				-0.8
4,217,930	+				-0.6
4,217,933	+				+0.1
4,217,934	-				+1.0
4,218,083	+				+0.6
4,218,084	-				-0.7
4,218,087	+				-0.2
4,218,087	+				+1.8
4,218,088	-				+0.1
4,218,088	-				-1.7
4,218,119	+				+2.8
4,218,143	+				+1.2
4,218,144	-				-2.2
4,218,144	-				+1.6
4,218,184	-				+0.3
4,218,184	-				-0.7
4,218,186	-				+0.4
4,218,191	+				+1.7
4,218,192	-				+1.1
4,218,208	-				-1.3
4,218,252	+				+0.7
4,218,340	+		Echvi_3558	0.16	-3.9
4,218,341	-		Echvi_3558	0.16	+1.7