Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3400

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,019,455	+		Echvi_3399	0.25	-0.7
4,019,455	+		Echvi_3399	0.25	+1.3
4,019,455	+		Echvi_3399	0.25	+0.7
4,019,455	+		Echvi_3399	0.25	+1.0
4,019,456	-		Echvi_3399	0.25	+0.8
4,019,456	-		Echvi_3399	0.25	-1.0
4,019,456	-		Echvi_3399	0.25	+2.0
4,019,457	+		Echvi_3399	0.25	+0.8
4,019,458	-		Echvi_3399	0.26	-2.9
4,019,458	-		Echvi_3399	0.26	+1.8
4,019,458	-		Echvi_3399	0.26	-2.7
4,019,471	-		Echvi_3399	0.27	+1.4
4,019,472	+		Echvi_3399	0.27	+1.8
4,019,473	-		Echvi_3399	0.27	+0.4
4,019,476	-		Echvi_3399	0.27	-1.0
4,019,496	+		Echvi_3399	0.29	-0.0
4,019,497	-		Echvi_3399	0.29	-2.3
4,019,502	-		Echvi_3399	0.29	-0.4
4,019,516	-		Echvi_3399	0.30	-3.8
4,019,516	-		Echvi_3399	0.30	-2.5
4,019,539	+		Echvi_3399	0.32	-2.6
4,019,541	+		Echvi_3399	0.33	+0.7
4,019,623	+		Echvi_3399	0.39	-2.9
4,019,653	+		Echvi_3399	0.42	+0.1
4,019,653	+		Echvi_3399	0.42	-1.6
4,019,653	+		Echvi_3399	0.42	+0.9
4,019,654	-		Echvi_3399	0.42	-2.8
4,019,654	-		Echvi_3399	0.42	+1.0
4,019,654	-		Echvi_3399	0.42	-4.6
4,019,656	-		Echvi_3399	0.42	-0.0
4,019,680	+		Echvi_3399	0.44	-1.2
4,019,680	+		Echvi_3399	0.44	-1.0
4,019,681	-		Echvi_3399	0.44	+1.9
4,019,780	-		Echvi_3399	0.53	-2.2
4,019,870	-		Echvi_3399	0.60	+0.3
4,019,870	-		Echvi_3399	0.60	-0.8
4,019,886	-		Echvi_3399	0.62	-2.3
4,019,886	-		Echvi_3399	0.62	+0.3
4,020,069	-		Echvi_3399	0.77	-2.4
4,020,069	-		Echvi_3399	0.77	-1.2
4,020,071	-		Echvi_3399	0.77	+0.3
4,020,100	+		Echvi_3399	0.80	-0.7
4,020,251	-				-1.7
4,020,251	-				+0.6
4,020,256	+				-0.8
4,020,257	-				+2.2
4,020,260	-				+0.4
4,020,260	-				-0.0
4,020,310	-				+1.9
4,020,361	+				-0.6
4,020,384	-				-0.6
4,020,408	-				-2.4
4,020,415	+				-2.1
4,020,416	-				+2.2
4,020,427	+				+2.0
4,020,453	+				-3.4
4,020,474	-				+1.5
4,020,514	+				-0.5
4,020,515	-				-1.3
4,020,550	+				-1.3
4,020,609	-		Echvi_3400	0.13	+0.2
4,020,609	-		Echvi_3400	0.13	-0.8
4,020,649	+		Echvi_3400	0.16	-1.1
4,020,650	-		Echvi_3400	0.16	-0.8
4,020,674	-		Echvi_3400	0.18	-0.1
4,020,714	+		Echvi_3400	0.21	+0.7
4,020,714	+		Echvi_3400	0.21	+1.2
4,020,714	+		Echvi_3400	0.21	-2.8
4,020,714	+		Echvi_3400	0.21	-2.2
4,020,714	+		Echvi_3400	0.21	+0.2
4,020,715	-		Echvi_3400	0.21	-1.0
4,020,715	-		Echvi_3400	0.21	+0.9
4,020,716	+		Echvi_3400	0.21	+0.6
4,020,716	+		Echvi_3400	0.21	-3.2
4,020,716	+		Echvi_3400	0.21	-0.8
4,020,716	+		Echvi_3400	0.21	-2.4
4,020,717	-		Echvi_3400	0.21	+0.2
4,020,717	-		Echvi_3400	0.21	-0.0
4,020,806	+		Echvi_3400	0.27	-2.9
4,020,807	-		Echvi_3400	0.27	-2.0
4,020,855	-		Echvi_3400	0.31	+2.0
4,020,855	-		Echvi_3400	0.31	-1.4
4,020,855	-		Echvi_3400	0.31	+1.9
4,020,865	+		Echvi_3400	0.31	+2.6
4,020,865	+		Echvi_3400	0.31	+0.7
4,020,866	-		Echvi_3400	0.31	-1.6
4,020,869	+		Echvi_3400	0.32	+1.2
4,020,870	-		Echvi_3400	0.32	-3.4
4,020,870	-		Echvi_3400	0.32	+0.7
4,020,910	+		Echvi_3400	0.34	-0.8
4,020,910	+		Echvi_3400	0.34	+0.5
4,020,911	-		Echvi_3400	0.34	+0.7
4,021,078	+		Echvi_3400	0.46	+1.2
4,021,079	-		Echvi_3400	0.46	-1.4
4,021,079	-		Echvi_3400	0.46	-2.4
4,021,112	-		Echvi_3400	0.49	-2.9
4,021,112	-		Echvi_3400	0.49	-0.4
4,021,153	+		Echvi_3400	0.51	-2.4
4,021,173	+		Echvi_3400	0.53	-0.6
4,021,264	-		Echvi_3400	0.59	-1.8
4,021,264	-		Echvi_3400	0.59	-0.5
4,021,303	+		Echvi_3400	0.62	-1.5
4,021,371	+		Echvi_3400	0.67	-3.2
4,021,371	+		Echvi_3400	0.67	+1.4
4,021,372	-		Echvi_3400	0.67	-0.8
4,021,372	-		Echvi_3400	0.67	+3.3
4,021,446	+		Echvi_3400	0.72	-0.4
4,021,501	+		Echvi_3400	0.76	-1.0
4,021,542	-		Echvi_3400	0.79	+2.0
4,021,542	-		Echvi_3400	0.79	+1.3
4,021,542	-		Echvi_3400	0.79	+0.3
4,021,561	-		Echvi_3400	0.80	+1.6
4,021,584	+		Echvi_3400	0.82	-3.2
4,021,584	+		Echvi_3400	0.82	-1.6
4,021,591	+		Echvi_3400	0.82	+1.5
4,021,601	+		Echvi_3400	0.83	-0.4
4,021,601	+		Echvi_3400	0.83	+1.5
4,021,700	+		Echvi_3400	0.90	-0.0
4,021,828	-				-1.5
4,021,828	-				+1.2
4,021,845	-				-0.2
4,021,860	+				-2.1
4,021,861	-				-0.6
4,021,874	+				+2.0
4,021,875	-				+0.8
4,021,875	-				-0.9
4,021,892	+				-2.3
4,021,892	+				-2.2
4,021,932	+				-1.4
4,021,932	+				-1.7
4,021,933	-				+0.3
4,022,122	-		Echvi_3401	0.34	-1.0
4,022,270	-		Echvi_3401	0.75	-1.0
4,022,272	-		Echvi_3401	0.75	-0.2
4,022,537	-		Echvi_3402	0.46	-3.6
4,022,539	-		Echvi_3402	0.47	-1.3
4,022,539	-		Echvi_3402	0.47	+0.6
4,022,544	-		Echvi_3402	0.50	-0.3
4,022,623	+				-1.3
4,022,627	+				-3.0
4,022,646	+				+0.4
4,022,650	+				+0.3
4,022,650	+				+1.1
4,022,650	+				-0.4
4,022,740	+				+1.1
4,022,740	+				-3.1
4,022,740	+				+2.4
4,022,743	+				+0.6
4,022,743	+				+0.1
4,022,744	-				-0.6
4,022,744	-				+0.8
4,022,769	+				+2.2
4,022,769	+				+2.2
4,022,769	+				+0.6
4,022,769	+				-0.9
4,022,770	-				-0.5
4,022,772	+				+1.5
4,022,772	+				-1.4
4,022,773	-				+0.6
4,022,773	-				+0.2
4,022,814	+				+1.5
4,022,825	+				-2.0
4,022,834	+				-0.9
4,022,834	+				+0.4
4,022,835	-				-0.1
4,022,835	-				+1.2
4,022,835	-				-1.8
4,022,835	-				-2.1
4,022,835	-				+1.9
4,022,837	+				-3.1
4,022,837	+				-0.1
4,022,838	-				-0.1