Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3397

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
4,014,284	-		Echvi_3396	0.64	-0.4
4,014,290	-		Echvi_3396	0.64	+0.4
4,014,317	+		Echvi_3396	0.66	-2.2
4,014,355	-		Echvi_3396	0.68	+1.5
4,014,355	-		Echvi_3396	0.68	+2.0
4,014,355	-		Echvi_3396	0.68	-1.0
4,014,360	+		Echvi_3396	0.69	-1.2
4,014,361	-		Echvi_3396	0.69	+1.2
4,014,371	+		Echvi_3396	0.69	+0.6
4,014,372	-		Echvi_3396	0.69	+1.8
4,014,381	-		Echvi_3396	0.70	-1.4
4,014,385	+		Echvi_3396	0.70	-2.4
4,014,413	+		Echvi_3396	0.72	+1.4
4,014,538	-		Echvi_3396	0.79	+0.8
4,014,550	-		Echvi_3396	0.80	-3.3
4,014,550	-		Echvi_3396	0.80	-2.2
4,014,613	-		Echvi_3396	0.84	-0.6
4,014,718	+				+0.4
4,014,779	+				+0.2
4,014,856	+				+2.5
4,014,857	-				+1.1
4,014,875	-				-1.6
4,014,877	+				+0.4
4,014,878	-				+0.5
4,014,878	-				-2.1
4,014,932	-				+0.5
4,015,020	-				-3.2
4,015,045	+				-0.6
4,015,060	-				-1.5
4,015,157	+				-0.8
4,015,158	-				+2.4
4,015,172	-				-2.7
4,015,180	+				-0.1
4,015,181	-				+1.5
4,015,236	-				-0.1
4,015,250	+				-1.0
4,015,263	-				+1.7
4,015,263	-				+0.3
4,015,275	-				+1.0
4,015,275	-				-2.0
4,015,283	+				-2.1
4,015,283	+				+1.8
4,015,303	+				-0.4
4,015,303	+				-0.5
4,015,303	+				-1.0
4,015,304	-				+0.6
4,015,304	-				+0.7
4,015,304	-				-3.0
4,015,379	-				+0.3
4,015,385	+		Echvi_3397	0.10	+0.7
4,015,390	-		Echvi_3397	0.11	-1.8
4,015,390	-		Echvi_3397	0.11	+0.4
4,015,548	+		Echvi_3397	0.23	+0.4
4,015,549	-		Echvi_3397	0.23	-2.7
4,015,590	+		Echvi_3397	0.26	-0.3
4,015,604	-		Echvi_3397	0.28	+2.0
4,015,674	+		Echvi_3397	0.33	-1.0
4,015,674	+		Echvi_3397	0.33	+1.3
4,015,749	-		Echvi_3397	0.39	-2.4
4,015,749	-		Echvi_3397	0.39	-0.4
4,015,761	+		Echvi_3397	0.40	-2.6
4,015,761	+		Echvi_3397	0.40	-1.4
4,015,762	-		Echvi_3397	0.40	+0.5
4,015,762	-		Echvi_3397	0.40	-1.8
4,015,836	-		Echvi_3397	0.46	-2.3
4,015,855	-		Echvi_3397	0.47	+0.1
4,015,860	+		Echvi_3397	0.48	+1.7
4,015,861	-		Echvi_3397	0.48	+0.5
4,015,861	-		Echvi_3397	0.48	-2.1
4,015,867	-		Echvi_3397	0.48	+0.7
4,015,887	-		Echvi_3397	0.50	-2.7
4,015,887	-		Echvi_3397	0.50	+1.1
4,015,894	+		Echvi_3397	0.50	-3.5
4,015,895	-		Echvi_3397	0.50	-0.2
4,015,895	-		Echvi_3397	0.50	+0.7
4,015,895	-		Echvi_3397	0.50	-2.8
4,015,912	+		Echvi_3397	0.52	-0.7
4,015,912	+		Echvi_3397	0.52	+0.4
4,015,913	-		Echvi_3397	0.52	-1.6
4,015,913	-		Echvi_3397	0.52	-1.1
4,015,933	+		Echvi_3397	0.53	+1.4
4,015,933	+		Echvi_3397	0.53	+1.7
4,015,934	-		Echvi_3397	0.53	-0.4
4,015,936	-		Echvi_3397	0.54	-1.7
4,015,966	+		Echvi_3397	0.56	-1.8
4,015,977	+		Echvi_3397	0.57	+2.0
4,015,984	-		Echvi_3397	0.57	+1.5
4,015,984	-		Echvi_3397	0.57	+0.7
4,015,984	-		Echvi_3397	0.57	-1.0
4,015,987	+		Echvi_3397	0.58	+3.0
4,015,988	-		Echvi_3397	0.58	+0.1
4,015,992	+		Echvi_3397	0.58	-0.0
4,016,054	+		Echvi_3397	0.63	-1.8
4,016,054	+		Echvi_3397	0.63	-2.8
4,016,056	+		Echvi_3397	0.63	+3.1
4,016,075	-		Echvi_3397	0.64	-0.3
4,016,125	-		Echvi_3397	0.68	-0.8
4,016,128	+		Echvi_3397	0.69	-3.5
4,016,129	-		Echvi_3397	0.69	-1.4
4,016,129	-		Echvi_3397	0.69	-0.9
4,016,158	+		Echvi_3397	0.71	-0.9
4,016,158	+		Echvi_3397	0.71	-1.7
4,016,159	-		Echvi_3397	0.71	+0.8
4,016,264	+		Echvi_3397	0.79	+1.2
4,016,264	+		Echvi_3397	0.79	-1.2
4,016,265	-		Echvi_3397	0.79	-4.4
4,016,265	-		Echvi_3397	0.79	-0.2
4,016,399	-		Echvi_3397	0.90	+0.7
4,016,458	+				-3.0
4,016,458	+				+0.6
4,016,459	-				-2.1
4,016,467	-				+1.0
4,016,514	-				-1.4
4,016,538	-				-3.5
4,016,542	-				+1.0
4,016,595	-				-1.0
4,016,597	-				+0.5
4,016,606	+				-2.3
4,016,646	+				+0.4
4,016,647	-				+0.6
4,016,647	-				+0.6
4,016,647	-				-0.1
4,016,650	-				-1.7
4,016,650	-				-2.4
4,016,806	-				+1.6
4,016,806	-				+2.4
4,016,830	-				+0.6
4,016,869	+				+0.8
4,016,908	+		Echvi_3398	0.12	-2.6
4,016,909	-		Echvi_3398	0.12	-2.3
4,016,909	-		Echvi_3398	0.12	+1.6
4,017,004	+		Echvi_3398	0.16	+1.4
4,017,004	+		Echvi_3398	0.16	+0.4
4,017,009	+		Echvi_3398	0.16	-0.8
4,017,070	+		Echvi_3398	0.19	-0.8
4,017,113	+		Echvi_3398	0.21	-3.5
4,017,122	+		Echvi_3398	0.21	+0.0
4,017,122	+		Echvi_3398	0.21	-1.2
4,017,122	+		Echvi_3398	0.21	-3.8
4,017,123	-		Echvi_3398	0.21	-0.8
4,017,216	+		Echvi_3398	0.26	-1.4
4,017,222	+		Echvi_3398	0.26	+2.5
4,017,222	+		Echvi_3398	0.26	-1.0
4,017,226	+		Echvi_3398	0.26	-1.5
4,017,226	+		Echvi_3398	0.26	-1.4
4,017,226	+		Echvi_3398	0.26	-2.1
4,017,227	-		Echvi_3398	0.26	+1.2
4,017,228	+		Echvi_3398	0.26	-1.4
4,017,262	+		Echvi_3398	0.28	-2.1
4,017,337	-		Echvi_3398	0.31	-2.1
4,017,337	-		Echvi_3398	0.31	-0.2
4,017,382	+		Echvi_3398	0.33	+0.2
4,017,430	-		Echvi_3398	0.35	-1.0
4,017,453	+		Echvi_3398	0.36	+2.0
4,017,454	-		Echvi_3398	0.36	-1.2
4,017,475	+		Echvi_3398	0.37	+2.1
4,017,476	-		Echvi_3398	0.37	+0.3
4,017,526	-		Echvi_3398	0.40	-1.9