Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3298

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,900,724	+		Echvi_3297	0.75	+0.4
3,900,850	-		Echvi_3297	0.82	+1.4
3,900,896	+		Echvi_3297	0.85	+0.3
3,900,896	+		Echvi_3297	0.85	-1.6
3,900,896	+		Echvi_3297	0.85	+2.6
3,900,896	+		Echvi_3297	0.85	+0.9
3,900,896	+		Echvi_3297	0.85	-1.3
3,900,896	+		Echvi_3297	0.85	+1.1
3,900,896	+		Echvi_3297	0.85	-4.5
3,900,897	-		Echvi_3297	0.85	+2.4
3,900,897	-		Echvi_3297	0.85	+2.5
3,900,897	-		Echvi_3297	0.85	+0.4
3,900,897	-		Echvi_3297	0.85	+1.6
3,900,972	+		Echvi_3297	0.89	-0.0
3,900,972	+		Echvi_3297	0.89	+0.8
3,901,031	+				-0.1
3,901,031	+				+0.4
3,901,031	+				+1.0
3,901,031	+				-0.3
3,901,032	-				-0.3
3,901,032	-				-3.1
3,901,033	+				-1.4
3,901,033	+				+0.0
3,901,033	+				-1.1
3,901,034	-				-2.1
3,901,034	-				-0.6
3,901,038	+				-1.1
3,901,164	-				+1.2
3,901,293	+				-1.4
3,901,293	+				+2.0
3,901,294	-				+0.9
3,901,298	+				-0.1
3,901,299	-				+2.6
3,901,299	-				-1.0
3,901,341	-				+0.3
3,901,346	+				-0.8
3,901,347	-				-0.3
3,901,477	+				+0.6
3,901,478	-				-4.3
3,901,479	+				+2.0
3,901,549	+				-0.9
3,901,615	+				+1.7
3,901,636	+				+0.5
3,901,701	+		Echvi_3298	0.11	+2.6
3,901,814	+		Echvi_3298	0.32	-0.8
3,901,815	-		Echvi_3298	0.32	+0.3
3,901,815	-		Echvi_3298	0.32	-3.3
3,901,816	+		Echvi_3298	0.32	+3.3
3,901,816	+		Echvi_3298	0.32	-0.8
3,901,816	+		Echvi_3298	0.32	-1.5
3,901,816	+		Echvi_3298	0.32	-1.7
3,901,816	+				+2.0
3,901,817	-		Echvi_3298	0.32	+0.2
3,901,817	-		Echvi_3298	0.32	-1.7
3,901,817	-		Echvi_3298	0.32	+0.6
3,901,874	+		Echvi_3298	0.43	+0.0
3,901,875	-		Echvi_3298	0.43	+2.3
3,901,875	-		Echvi_3298	0.43	-2.4
3,901,875	-		Echvi_3298	0.43	+0.1
3,901,892	+		Echvi_3298	0.46	+0.7
3,901,893	-		Echvi_3298	0.46	+0.3
3,901,975	+		Echvi_3298	0.61	-2.4
3,901,998	+		Echvi_3298	0.65	+0.7
3,902,043	+		Echvi_3298	0.74	-2.5
3,902,044	-		Echvi_3298	0.74	-1.4
3,902,044	-		Echvi_3298	0.74	-1.3
3,902,146	-				-1.8
3,902,205	+				+0.9
3,902,205	+				+2.0
3,902,206	-				+1.6
3,902,236	-				+0.7
3,902,241	-				+1.1
3,902,308	-				+0.8
3,902,334	-				+1.5
3,902,364	+				-0.5
3,902,366	+				+0.9
3,902,367	-				+1.1
3,902,386	+				-2.4
3,902,387	-				-2.4
3,902,387	-				-2.1
3,902,388	+				-1.6
3,902,388	+				+2.9
3,902,388	+				+1.3
3,902,388	+				+0.0
3,902,389	-				-1.4
3,902,432	+				+2.0
3,902,433	-				+0.8
3,902,450	+				-3.0
3,902,485	-				+0.4
3,902,485	-				+0.1
3,902,497	+				+1.4
3,902,497	+				+1.7
3,902,498	-				+2.5
3,902,498	-				-0.7
3,902,526	+				-2.0
3,902,577	+				+0.4
3,902,577	+				-1.8
3,902,578	-				-2.2
3,902,578	-				-0.4
3,902,579	+				-3.0
3,902,580	-				-1.6
3,902,580	-				+1.0
3,902,651	+				-0.3
3,902,651	+				-1.1
3,902,668	+				+0.9
3,902,712	+				+0.1
3,902,712	+				-2.6
3,902,728	+		Echvi_3299	0.10	+0.9
3,902,770	+		Echvi_3299	0.12	-1.7
3,902,776	+		Echvi_3299	0.12	-2.2
3,902,776	+		Echvi_3299	0.12	+0.6
3,902,776	+		Echvi_3299	0.12	+0.7
3,902,777	-		Echvi_3299	0.12	+1.6
3,902,777	-		Echvi_3299	0.12	-2.2
3,902,777	-		Echvi_3299	0.12	-0.3
3,902,791	-		Echvi_3299	0.13	-1.0
3,902,791	-		Echvi_3299	0.13	-0.5
3,902,807	+		Echvi_3299	0.14	+1.0
3,902,870	-		Echvi_3299	0.16	-2.5
3,902,883	+		Echvi_3299	0.17	+2.3
3,902,895	+		Echvi_3299	0.17	-2.2
3,902,895	+		Echvi_3299	0.17	-2.4
3,902,896	-		Echvi_3299	0.17	+2.0
3,902,896	-		Echvi_3299	0.17	+2.2
3,902,918	+		Echvi_3299	0.18	-2.3
3,902,918	+		Echvi_3299	0.18	-3.8
3,902,919	-		Echvi_3299	0.18	+2.0
3,902,919	-		Echvi_3299	0.18	-0.5
3,902,983	+		Echvi_3299	0.21	-0.1
3,902,983	+		Echvi_3299	0.21	+0.2
3,902,991	+		Echvi_3299	0.21	-1.5
3,902,991	+		Echvi_3299	0.21	-1.9
3,902,991	+		Echvi_3299	0.21	+0.4
3,902,991	+		Echvi_3299	0.21	+1.3
3,902,992	-		Echvi_3299	0.22	+1.9
3,903,055	+		Echvi_3299	0.24	-3.1
3,903,057	+		Echvi_3299	0.24	-1.0
3,903,074	+		Echvi_3299	0.25	-1.2
3,903,074	+		Echvi_3299	0.25	+0.1
3,903,075	-		Echvi_3299	0.25	+1.7
3,903,091	-		Echvi_3299	0.26	+1.3
3,903,091	-		Echvi_3299	0.26	-1.5