Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3253

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,857,298	+		Echvi_3251	0.67	-1.7
3,857,299	-		Echvi_3251	0.68	-0.9
3,857,327	-		Echvi_3251	0.71	+0.4
3,857,364	-		Echvi_3251	0.76	-1.6
3,857,457	-		Echvi_3251	0.89	+0.6
3,857,457	-		Echvi_3251	0.89	+0.2
3,857,461	-		Echvi_3251	0.90	+0.6
3,857,478	-				-1.3
3,857,484	+				-0.7
3,857,485	-				-2.4
3,857,485	-				-2.4
3,857,523	+				+1.6
3,857,549	+				-1.9
3,857,600	-				+2.2
3,857,604	+				+0.6
3,857,613	-				+0.4
3,857,620	-				-1.3
3,857,622	-				-2.1
3,857,665	-				+0.1
3,857,743	-		Echvi_3252	0.19	+0.0
3,857,860	+		Echvi_3252	0.37	+1.2
3,857,861	-		Echvi_3252	0.37	-3.7
3,857,861	-		Echvi_3252	0.37	+2.7
3,857,873	+		Echvi_3252	0.39	+2.9
3,857,917	+		Echvi_3252	0.46	-1.4
3,857,935	-		Echvi_3252	0.49	+2.4
3,857,935	-		Echvi_3252	0.49	-0.9
3,857,935	-		Echvi_3252	0.49	-1.8
3,857,935	-		Echvi_3252	0.49	+0.7
3,857,938	+		Echvi_3252	0.49	-1.3
3,857,966	-		Echvi_3252	0.53	-0.5
3,857,978	-		Echvi_3252	0.55	-3.7
3,857,990	-		Echvi_3252	0.57	-1.1
3,858,120	-		Echvi_3252	0.77	-1.8
3,858,244	+				-1.9
3,858,282	+				+1.2
3,858,282	+				-0.8
3,858,287	-				+0.5
3,858,327	-				+2.2
3,858,327	-				+4.4
3,858,333	-				+0.2
3,858,333	-				-3.2
3,858,440	+		Echvi_3253	0.18	+1.8
3,858,462	+		Echvi_3253	0.20	+0.1
3,858,462	+		Echvi_3253	0.20	-0.6
3,858,481	+		Echvi_3253	0.23	+1.1
3,858,482	-		Echvi_3253	0.23	-1.5
3,858,523	+		Echvi_3253	0.28	-2.2
3,858,532	+		Echvi_3253	0.29	+0.5
3,858,533	-		Echvi_3253	0.29	+1.6
3,858,544	+		Echvi_3253	0.30	+1.1
3,858,545	-		Echvi_3253	0.30	+0.0
3,858,553	+		Echvi_3253	0.31	-0.5
3,858,553	+		Echvi_3253	0.31	-2.2
3,858,557	-		Echvi_3253	0.32	+0.1
3,858,557	-		Echvi_3253	0.32	-0.8
3,858,557	-		Echvi_3253	0.32	-0.6
3,858,563	-		Echvi_3253	0.32	-2.6
3,858,563	-		Echvi_3253	0.32	-0.9
3,858,564	+		Echvi_3253	0.32	+1.1
3,858,564	+		Echvi_3253	0.32	-2.8
3,858,564	+		Echvi_3253	0.32	-1.0
3,858,564	+		Echvi_3253	0.32	-1.4
3,858,564	+		Echvi_3253	0.32	+0.1
3,858,565	-		Echvi_3253	0.33	+2.7
3,858,565	-		Echvi_3253	0.33	+0.8
3,858,565	-		Echvi_3253	0.33	+0.9
3,858,565	-		Echvi_3253	0.33	-1.6
3,858,565	-		Echvi_3253	0.33	+0.1
3,858,565	-		Echvi_3253	0.33	-0.1
3,858,565	-		Echvi_3253	0.33	-1.5
3,858,565	-		Echvi_3253	0.33	+1.2
3,858,565	-		Echvi_3253	0.33	-0.4
3,858,565	-		Echvi_3253	0.33	-2.8
3,858,565	-		Echvi_3253	0.33	-0.1
3,858,628	+		Echvi_3253	0.40	-3.0
3,858,668	-		Echvi_3253	0.45	+1.0
3,858,681	+		Echvi_3253	0.47	-0.0
3,858,688	+		Echvi_3253	0.47	+1.3
3,858,688	+		Echvi_3253	0.47	+0.5
3,858,710	+		Echvi_3253	0.50	+0.6
3,858,792	+		Echvi_3253	0.60	-0.8
3,858,793	-		Echvi_3253	0.60	+0.4
3,858,849	-		Echvi_3253	0.67	+0.1
3,858,888	-		Echvi_3253	0.71	-0.1
3,858,892	+		Echvi_3253	0.72	-2.1
3,858,910	-		Echvi_3253	0.74	+0.7
3,858,985	+		Echvi_3253	0.83	+0.6
3,859,024	-		Echvi_3253	0.88	+0.2
3,859,064	-				-2.3
3,859,071	-				+1.4
3,859,071	-				+1.9
3,859,080	-				+1.7
3,859,125	-				+1.1
3,859,154	+				+0.5
3,859,170	+				+0.9
3,859,170	+				+0.9
3,859,170	+				-1.3
3,859,170	+				-0.8
3,859,170	+				-2.9
3,859,170	+				+0.2
3,859,170	+				-0.3
3,859,170	+				-1.8
3,859,170	+				+2.4
3,859,171	-				+1.7
3,859,177	+				-2.0
3,859,191	+				+2.9
3,859,191	+				-1.9
3,859,192	-				-1.2
3,859,225	+				-2.9
3,859,259	-				+1.8
3,859,277	+				-3.2
3,859,277	+				-1.0
3,859,278	-				+0.6
3,859,278	-				+1.1
3,859,278	-				+3.1
3,859,278	-				+0.1
3,859,298	+				-2.1
3,859,318	+		Echvi_3254	0.11	-0.8
3,859,380	+		Echvi_3254	0.18	-2.0
3,859,381	-		Echvi_3254	0.18	-0.3
3,859,381	-		Echvi_3254	0.18	-0.2
3,859,406	+		Echvi_3254	0.20	-2.2
3,859,406	+		Echvi_3254	0.20	-1.9
3,859,406	+		Echvi_3254	0.20	-0.8
3,859,406	+		Echvi_3254	0.20	-0.8
3,859,407	-		Echvi_3254	0.20	-3.0
3,859,407	-		Echvi_3254	0.20	-0.7
3,859,419	-		Echvi_3254	0.22	-1.6
3,859,419	-		Echvi_3254	0.22	-0.3
3,859,421	+		Echvi_3254	0.22	-1.3
3,859,422	-		Echvi_3254	0.22	+3.2
3,859,424	+		Echvi_3254	0.22	-3.1
3,859,424	+		Echvi_3254	0.22	-0.1
3,859,425	-		Echvi_3254	0.22	+0.7
3,859,513	-		Echvi_3254	0.31	+0.1
3,859,514	+		Echvi_3254	0.31	-2.7
3,859,535	+		Echvi_3254	0.33	-1.8
3,859,554	-		Echvi_3254	0.35	+2.1
3,859,559	+		Echvi_3254	0.36	-1.3
3,859,560	-		Echvi_3254	0.36	+0.9
3,859,633	+		Echvi_3254	0.43	-0.8
3,859,650	-		Echvi_3254	0.45	-2.4
3,859,650	-		Echvi_3254	0.45	+0.6
3,859,667	+		Echvi_3254	0.47	+0.3
3,859,670	+		Echvi_3254	0.47	-0.2
3,859,670	+		Echvi_3254	0.47	+1.3
3,859,670	+		Echvi_3254	0.47	-0.9
3,859,670	+		Echvi_3254	0.47	-0.1
3,859,713	-		Echvi_3254	0.52	+0.8
3,859,722	+		Echvi_3254	0.52	+1.8
3,859,722	+		Echvi_3254	0.52	+1.2
3,859,723	-		Echvi_3254	0.53	+0.1
3,859,751	-		Echvi_3254	0.55	+3.1
3,859,755	+		Echvi_3254	0.56	-0.6
3,859,755	+		Echvi_3254	0.56	+0.7
3,859,755	+		Echvi_3254	0.56	-0.1
3,859,798	+		Echvi_3254	0.60	+1.2
3,859,799	-		Echvi_3254	0.60	-1.6
3,859,807	-		Echvi_3254	0.61	+0.5
3,859,834	-		Echvi_3254	0.64	+1.3
3,859,836	+		Echvi_3254	0.64	-1.9
3,859,836	+		Echvi_3254	0.64	-1.9
3,859,837	-		Echvi_3254	0.64	-0.9
3,859,837	-		Echvi_3254	0.64	+0.9
3,859,837	-		Echvi_3254	0.64	-0.8
3,859,876	-		Echvi_3254	0.68	-1.1
3,859,911	+		Echvi_3254	0.72	+1.8
3,859,912	-		Echvi_3254	0.72	+1.6
3,859,918	-		Echvi_3254	0.72	+0.2
3,859,942	-		Echvi_3254	0.75	-0.2
3,859,959	+		Echvi_3254	0.77	-0.3
3,859,968	-		Echvi_3254	0.78	+0.8
3,860,112	+				-1.3
3,860,115	+				+0.5
3,860,115	+				+2.6
3,860,115	+				+3.1
3,860,116	-				+2.1
3,860,116	-				+2.6