Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3239

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,840,254	+				-1.3
3,840,261	-				-0.6
3,840,279	+				+1.3
3,840,279	+				-1.7
3,840,279	+				-0.3
3,840,283	+				+0.4
3,840,284	-				-2.1
3,841,270	+				-0.4
3,841,270	+				+1.8
3,841,660	+		Echvi_3239	0.22	-2.0
3,841,714	+		Echvi_3239	0.24	-1.7
3,841,714	+		Echvi_3239	0.24	-0.3
3,841,724	+		Echvi_3239	0.25	+0.4
3,841,811	+		Echvi_3239	0.29	-1.7
3,841,858	+		Echvi_3239	0.31	-1.4
3,841,864	-		Echvi_3239	0.31	+0.0
3,841,914	+		Echvi_3239	0.34	-1.0
3,841,929	+		Echvi_3239	0.35	-1.0
3,841,949	+		Echvi_3239	0.36	+1.4
3,841,949	+		Echvi_3239	0.36	-0.6
3,841,976	+		Echvi_3239	0.37	+0.9
3,842,035	+		Echvi_3239	0.40	-2.2
3,842,219	+		Echvi_3239	0.49	-0.8
3,842,258	+		Echvi_3239	0.50	-4.1
3,842,286	+		Echvi_3239	0.52	-1.5
3,842,312	+		Echvi_3239	0.53	+0.7
3,842,312	+		Echvi_3239	0.53	-2.2
3,842,312	+				+0.4
3,842,313	-		Echvi_3239	0.53	-2.6
3,842,326	+		Echvi_3239	0.54	-1.4
3,842,326	+		Echvi_3239	0.54	+1.3
3,842,327	-		Echvi_3239	0.54	-1.1
3,842,347	+		Echvi_3239	0.55	-0.8
3,842,354	+		Echvi_3239	0.55	+0.5
3,842,368	+		Echvi_3239	0.56	-0.5
3,842,407	-		Echvi_3239	0.58	-3.1
3,842,490	+		Echvi_3239	0.62	-1.4
3,842,570	+		Echvi_3239	0.65	-2.4
3,842,622	+		Echvi_3239	0.68	-0.4
3,842,623	-		Echvi_3239	0.68	-0.3
3,842,676	+		Echvi_3239	0.70	+2.9
3,842,676	+		Echvi_3239	0.70	+0.8
3,842,676	+		Echvi_3239	0.70	+1.4
3,842,676	+		Echvi_3239	0.70	-0.6
3,842,676	+		Echvi_3239	0.70	-1.1
3,842,808	+		Echvi_3239	0.77	-1.1
3,842,870	+		Echvi_3239	0.80	-1.1
3,842,923	+		Echvi_3239	0.82	-1.1
3,842,923	+		Echvi_3239	0.82	-2.6
3,842,924	-		Echvi_3239	0.82	+2.0
3,842,929	+		Echvi_3239	0.83	-2.5
3,843,246	+				+0.8
3,843,246	+				-1.9
3,843,258	+				-1.4
3,843,298	+				-1.3
3,843,413	+				-2.1
3,843,548	+		Echvi_3240	0.17	+2.8
3,843,548	+		Echvi_3240	0.17	+1.0
3,843,550	+		Echvi_3240	0.17	+0.0
3,843,550	+		Echvi_3240	0.17	+1.2
3,843,550	+		Echvi_3240	0.17	+0.2
3,843,550	+		Echvi_3240	0.17	+3.1
3,843,591	+		Echvi_3240	0.20	-1.3
3,843,595	+		Echvi_3240	0.20	+0.0
3,843,815	+		Echvi_3240	0.35	-0.6
3,843,826	+		Echvi_3240	0.36	-1.2
3,844,013	+		Echvi_3240	0.49	+0.2
3,844,188	+		Echvi_3240	0.61	-3.0
3,844,219	+		Echvi_3240	0.63	-2.6
3,844,219	+		Echvi_3240	0.63	+0.9