Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3230

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,827,251	+				-0.8
3,827,251	+				-0.6
3,827,252	-				-3.6
3,827,253	+				-1.3
3,827,253	+				+0.3
3,827,253	+				-1.9
3,827,253	+				-2.5
3,827,253	+				-1.1
3,827,254	-				-0.6
3,827,254	-				+0.1
3,827,407	+				+3.2
3,827,407	+				-0.1
3,827,408	-				-0.5
3,827,408	-				-1.6
3,827,408	-				-0.8
3,827,423	-				-0.4
3,827,596	+				-1.6
3,827,596	+				+2.2
3,827,596	+				-1.2
3,827,597	-				+1.0
3,827,598	+				-0.2
3,827,599	-				-2.8
3,827,599	-				-1.6
3,827,603	-				+0.1
3,827,603	-				+0.8
3,827,746	+				-0.7
3,827,750	+				+1.1
3,827,751	-				-0.9
3,827,760	+				+1.6
3,827,921	-		Echvi_3229	0.36	+0.1
3,828,011	-		Echvi_3229	0.56	+1.1
3,828,039	-		Echvi_3229	0.63	+1.5
3,828,041	-		Echvi_3229	0.63	+0.8
3,828,041	-		Echvi_3229	0.63	+1.9
3,828,063	-		Echvi_3229	0.68	+1.2
3,828,095	+		Echvi_3229	0.75	-0.1
3,828,096	-		Echvi_3229	0.76	-2.6
3,828,096	-		Echvi_3229	0.76	-3.9
3,828,104	-		Echvi_3229	0.77	+1.8
3,828,236	+				+2.3
3,828,236	+				-3.1
3,828,254	-				-1.6
3,828,254	-				-3.2
3,828,303	+				+1.0
3,828,303	+				+1.9
3,828,368	-		Echvi_3230	0.13	+2.1
3,828,368	-		Echvi_3230	0.13	-0.2
3,828,475	+		Echvi_3230	0.21	+1.1
3,828,475	+		Echvi_3230	0.21	+0.2
3,828,475	+		Echvi_3230	0.21	+1.1
3,828,477	+		Echvi_3230	0.21	-2.4
3,828,478	-		Echvi_3230	0.21	+1.1
3,828,478	-		Echvi_3230	0.21	-3.2
3,828,478	-		Echvi_3230	0.21	+0.2
3,828,494	-		Echvi_3230	0.22	-2.9
3,828,494	-		Echvi_3230	0.22	-3.4
3,828,515	+		Echvi_3230	0.24	-1.2
3,828,516	-		Echvi_3230	0.24	+0.0
3,828,516	-		Echvi_3230	0.24	+1.1
3,828,626	+		Echvi_3230	0.33	-0.5
3,828,626	+		Echvi_3230	0.33	-0.2
3,828,650	-		Echvi_3230	0.34	+1.9
3,828,715	+		Echvi_3230	0.40	-1.9
3,828,729	+		Echvi_3230	0.41	-2.9
3,828,730	-		Echvi_3230	0.41	-1.3
3,828,732	-		Echvi_3230	0.41	-2.1
3,828,732	-		Echvi_3230	0.41	-1.9
3,828,732	-		Echvi_3230	0.41	+0.6
3,828,772	+		Echvi_3230	0.44	-2.3
3,828,776	-		Echvi_3230	0.44	-2.4
3,828,825	+		Echvi_3230	0.48	+0.1
3,828,827	+		Echvi_3230	0.48	-2.0
3,828,827	+		Echvi_3230	0.48	-1.0
3,828,827	+		Echvi_3230	0.48	-0.9
3,828,827	+		Echvi_3230	0.48	+1.5
3,828,828	-		Echvi_3230	0.48	-1.3
3,828,828	-		Echvi_3230	0.48	+0.0
3,828,828	-		Echvi_3230	0.48	-0.3
3,828,831	+		Echvi_3230	0.49	-1.6
3,828,831	+		Echvi_3230	0.49	+1.1
3,828,832	-		Echvi_3230	0.49	+0.1
3,828,832	-		Echvi_3230	0.49	+1.6
3,828,878	+		Echvi_3230	0.52	+0.7
3,828,884	-		Echvi_3230	0.53	+1.4
3,828,884	-		Echvi_3230	0.53	+0.5
3,828,894	-		Echvi_3230	0.53	-0.1
3,828,894	-		Echvi_3230	0.53	-0.8
3,829,002	-		Echvi_3230	0.62	-1.7
3,829,028	+		Echvi_3230	0.64	-1.2
3,829,112	+		Echvi_3230	0.70	+0.4
3,829,113	-		Echvi_3230	0.70	+3.1
3,829,141	-		Echvi_3230	0.73	+2.2
3,829,200	-		Echvi_3230	0.77	-0.3
3,829,248	+		Echvi_3230	0.81	+1.3
3,829,249	-		Echvi_3230	0.81	+3.0
3,829,261	-		Echvi_3230	0.82	+0.2
3,829,262	+		Echvi_3230	0.82	-1.1
3,829,262	+		Echvi_3230	0.82	-0.5
3,829,292	+		Echvi_3230	0.84	-3.3
3,829,356	+		Echvi_3230	0.89	+0.4
3,829,357	-		Echvi_3230	0.89	-1.4
3,829,492	+				+1.3
3,829,492	+				-2.9
3,829,493	-				+1.1
3,829,642	+				+0.8
3,829,642	+				-0.8
3,829,654	-				-0.6
3,829,658	-				-0.5
3,829,682	+				+0.7
3,829,695	-				+1.2
3,829,746	+				-1.9
3,829,790	+				+0.1
3,829,790	+				-1.5
3,829,791	-				+0.1
3,829,792	+				+3.2
3,829,793	-				-3.3
3,829,793	-				-1.4
3,829,795	+				+1.1
3,829,795	+				-2.4
3,829,922	-		Echvi_3231	0.16	-1.3
3,829,965	-		Echvi_3231	0.18	-0.1
3,829,966	+		Echvi_3231	0.18	+1.1
3,829,966	+		Echvi_3231	0.18	-1.8
3,829,966	+		Echvi_3231	0.18	+0.8
3,829,967	-		Echvi_3231	0.18	+0.5
3,829,967	-		Echvi_3231	0.18	-1.4
3,829,968	+		Echvi_3231	0.18	+3.2
3,829,968	+		Echvi_3231	0.18	+0.5
3,829,968	+		Echvi_3231	0.18	-2.6
3,829,969	-		Echvi_3231	0.18	-1.3
3,829,969	-		Echvi_3231	0.18	-1.8
3,829,999	-		Echvi_3231	0.20	-1.4
3,830,033	-		Echvi_3231	0.22	+0.5
3,830,044	+		Echvi_3231	0.22	-1.8
3,830,044	+		Echvi_3231	0.22	-3.9
3,830,045	-		Echvi_3231	0.22	-0.5
3,830,128	+		Echvi_3231	0.26	+2.9
3,830,141	+		Echvi_3231	0.27	+1.1
3,830,195	-		Echvi_3231	0.30	+1.7
3,830,199	+		Echvi_3231	0.30	-1.5
3,830,200	-		Echvi_3231	0.30	+2.1
3,830,200	-		Echvi_3231	0.30	+2.6
3,830,200	-		Echvi_3231	0.30	-0.8
3,830,202	+		Echvi_3231	0.30	+1.6
3,830,202	+		Echvi_3231	0.30	-0.6
3,830,215	-		Echvi_3231	0.31	-2.1
3,830,231	+		Echvi_3231	0.31	-3.1
3,830,241	+		Echvi_3231	0.32	-0.6
3,830,249	+		Echvi_3231	0.32	+2.5
3,830,249	+		Echvi_3231	0.32	+0.3
3,830,250	-		Echvi_3231	0.32	-1.5
3,830,285	+		Echvi_3231	0.34	-0.0
3,830,285	+		Echvi_3231	0.34	+0.1
3,830,285	+		Echvi_3231	0.34	-1.3
3,830,286	-		Echvi_3231	0.34	+1.9
3,830,287	+		Echvi_3231	0.34	-2.4
3,830,287	+		Echvi_3231	0.34	-2.1
3,830,287	+		Echvi_3231	0.34	-1.8
3,830,287	+		Echvi_3231	0.34	-2.2
3,830,288	-		Echvi_3231	0.34	+1.2
3,830,288	-		Echvi_3231	0.34	-2.4
3,830,288	-		Echvi_3231	0.34	+2.2
3,830,288	-		Echvi_3231	0.34	-0.2
3,830,292	-		Echvi_3231	0.34	-1.1
3,830,299	+		Echvi_3231	0.35	-0.9
3,830,327	+		Echvi_3231	0.36	-1.0
3,830,328	-		Echvi_3231	0.36	-1.8
3,830,338	-		Echvi_3231	0.37	+2.3
3,830,357	+		Echvi_3231	0.38	-0.5
3,830,357	+		Echvi_3231	0.38	+0.8
3,830,357	+		Echvi_3231	0.38	-2.9
3,830,358	-		Echvi_3231	0.38	-2.9
3,830,364	+		Echvi_3231	0.38	+0.1
3,830,365	-		Echvi_3231	0.38	-1.8
3,830,378	+		Echvi_3231	0.39	-0.8
3,830,420	-		Echvi_3231	0.41	-0.8
3,830,452	-		Echvi_3231	0.42	-2.9
3,830,462	+		Echvi_3231	0.43	-0.5
3,830,462	+		Echvi_3231	0.43	+2.4
3,830,474	+		Echvi_3231	0.43	+0.7
3,830,474	+		Echvi_3231	0.43	-0.0
3,830,476	+		Echvi_3231	0.44	-2.5
3,830,476	+		Echvi_3231	0.44	+0.1
3,830,476	+		Echvi_3231	0.44	+0.9
3,830,477	-		Echvi_3231	0.44	+0.2
3,830,487	+		Echvi_3231	0.44	-1.6
3,830,487	+		Echvi_3231	0.44	-1.1