Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3201

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,797,382	-		Echvi_3199	0.69	-2.7
3,797,382	-		Echvi_3199	0.69	-2.2
3,797,382	-		Echvi_3199	0.69	+4.9
3,797,396	+		Echvi_3199	0.73	-1.8
3,797,397	-		Echvi_3199	0.73	+2.1
3,797,414	-		Echvi_3199	0.78	-0.9
3,797,437	+		Echvi_3199	0.83	-0.5
3,797,470	+				-0.9
3,797,471	-				-0.2
3,797,471	-				-1.1
3,797,477	-				+4.3
3,797,483	-				-0.2
3,797,483	-				+0.6
3,797,575	+				-1.4
3,797,641	-				-2.6
3,797,666	-		Echvi_3200	0.13	+1.0
3,797,676	-		Echvi_3200	0.15	+1.5
3,797,759	+		Echvi_3200	0.27	+0.2
3,797,831	+		Echvi_3200	0.37	-0.9
3,797,831	+		Echvi_3200	0.37	+1.0
3,797,831	+		Echvi_3200	0.37	-0.7
3,797,832	-		Echvi_3200	0.38	-3.3
3,797,852	+		Echvi_3200	0.40	+1.1
3,797,896	+		Echvi_3200	0.47	+1.4
3,797,897	-		Echvi_3200	0.47	+0.7
3,798,052	+		Echvi_3200	0.70	-1.7
3,798,117	+		Echvi_3200	0.79	-1.7
3,798,153	-		Echvi_3200	0.84	-1.8
3,798,201	+				+0.5
3,798,216	+				+0.5
3,798,313	-				-0.7
3,798,316	+				+0.0
3,798,353	+		Echvi_3201	0.11	-2.1
3,798,354	-		Echvi_3201	0.11	+1.6
3,798,358	-		Echvi_3201	0.12	+0.9
3,798,389	+		Echvi_3201	0.21	+3.4
3,798,396	+		Echvi_3201	0.23	+3.7
3,798,408	+		Echvi_3201	0.27	-0.7
3,798,409	-		Echvi_3201	0.27	-0.3
3,798,532	+		Echvi_3201	0.62	-2.4
3,798,550	+		Echvi_3201	0.67	+2.5
3,798,550	+		Echvi_3201	0.67	+1.4
3,798,550	+		Echvi_3201	0.67	-2.8
3,798,551	-		Echvi_3201	0.68	-0.9
3,798,551	-		Echvi_3201	0.68	+0.3
3,798,551	-		Echvi_3201	0.68	-1.4
3,798,551	-		Echvi_3201	0.68	-1.1
3,798,591	+		Echvi_3201	0.79	-1.2
3,798,591	+		Echvi_3201	0.79	+0.9
3,798,615	+		Echvi_3201	0.86	+0.4
3,798,629	-				+1.8
3,798,689	+				+0.6
3,798,697	-				-1.2
3,798,740	+				-0.6
3,798,807	+				-2.0
3,798,817	+				-0.5
3,798,817	+				+2.0
3,798,818	-				-1.9
3,798,825	+				-0.3
3,798,825	+				-3.5
3,798,826	-				-0.7
3,798,862	+				-0.2
3,798,862	+				+1.3
3,798,863	-				-1.5
3,798,863	-				-2.7
3,798,865	-				+1.1
3,798,954	-				+0.3
3,799,054	+				+0.9
3,799,055	-				+1.7
3,799,177	+		Echvi_3202	0.12	-0.2
3,799,178	-		Echvi_3202	0.12	+0.3
3,799,178	-		Echvi_3202	0.12	-2.8
3,799,187	+		Echvi_3202	0.12	-0.9
3,799,187	+		Echvi_3202	0.12	-0.0
3,799,188	-		Echvi_3202	0.12	-0.7
3,799,256	+		Echvi_3202	0.14	-0.7
3,799,257	-		Echvi_3202	0.14	-2.2
3,799,257	-		Echvi_3202	0.14	-3.0
3,799,258	+		Echvi_3202	0.14	-3.1
3,799,339	+		Echvi_3202	0.16	-2.2
3,799,339	+		Echvi_3202	0.16	-1.8
3,799,340	-		Echvi_3202	0.16	+1.0
3,799,342	+		Echvi_3202	0.16	+0.1
3,799,342	+		Echvi_3202	0.16	-2.4
3,799,345	+		Echvi_3202	0.17	-3.2
3,799,345	+		Echvi_3202	0.17	-2.4
3,799,345	+		Echvi_3202	0.17	-1.2
3,799,346	-		Echvi_3202	0.17	+0.4
3,799,364	+		Echvi_3202	0.17	-2.0
3,799,364	+		Echvi_3202	0.17	+1.7
3,799,365	-		Echvi_3202	0.17	-0.1
3,799,365	-		Echvi_3202	0.17	+1.0
3,799,365	-		Echvi_3202	0.17	-0.7
3,799,365	-		Echvi_3202	0.17	-1.4
3,799,411	+		Echvi_3202	0.18	+0.6
3,799,411	+		Echvi_3202	0.18	-0.1
3,799,411	+		Echvi_3202	0.18	+0.8
3,799,444	+		Echvi_3202	0.19	-3.0
3,799,626	+		Echvi_3202	0.25	-0.8
3,799,626	+		Echvi_3202	0.25	-1.5