Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3185

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,788,404	+				+0.2
3,788,405	-				-0.1
3,788,431	+				+1.0
3,788,431	+				-1.5
3,788,586	+		Echvi_3183	0.56	-2.4
3,788,588	+		Echvi_3183	0.56	-1.8
3,788,588	+		Echvi_3183	0.56	-1.5
3,788,609	+		Echvi_3183	0.62	-2.6
3,788,610	-		Echvi_3183	0.63	+0.4
3,788,632	+		Echvi_3183	0.69	-1.4
3,788,632	+		Echvi_3183	0.69	+0.4
3,788,633	-		Echvi_3183	0.70	-3.0
3,788,666	+		Echvi_3183	0.80	-0.1
3,788,723	+				-0.9
3,788,723	+				-1.9
3,788,723	+				+1.1
3,788,723	+				-0.5
3,788,724	-				-0.1
3,788,724	-				-0.7
3,788,724	-				-2.2
3,788,727	+				+0.5
3,788,734	-				+0.5
3,788,858	-		Echvi_3184	0.37	+2.6
3,788,864	+		Echvi_3184	0.39	+1.2
3,788,864	+		Echvi_3184	0.39	+1.3
3,788,865	-		Echvi_3184	0.39	-1.3
3,788,907	-		Echvi_3184	0.52	-0.1
3,788,930	-		Echvi_3184	0.60	+2.3
3,789,134	+				-2.3
3,789,134	+				+0.5
3,789,136	+				+1.2
3,789,136	+				+1.0
3,789,137	-				-1.1
3,789,137	-				-2.6
3,789,137	-				+1.7
3,789,137	-				+3.1
3,789,137	-				+0.1
3,789,140	+				-0.4
3,789,140	+				+1.8
3,789,161	-				+3.0
3,789,180	+				-1.2
3,789,181	-				+2.0
3,789,181	-				-1.5
3,789,217	+				-0.1
3,789,225	-				+1.8
3,789,225	-				+1.3
3,789,246	+				+1.1
3,789,246	+				+1.7
3,789,274	+				-1.3
3,789,299	-				-1.4
3,789,299	-				-3.1
3,789,299	-				+0.1
3,789,302	+				-1.8
3,789,302	+				-2.4
3,789,303	-				-0.1
3,789,303	-				+0.4
3,789,307	+				+0.3
3,789,393	-		Echvi_3185	0.15	-1.5
3,789,402	+		Echvi_3185	0.17	-3.0
3,789,403	-		Echvi_3185	0.17	+0.3
3,789,404	+				+2.1
3,789,404	+		Echvi_3185	0.17	-0.4
3,789,404	+		Echvi_3185	0.17	-0.1
3,789,409	-		Echvi_3185	0.18	-0.0
3,789,409	-		Echvi_3185	0.18	-0.1
3,789,497	-		Echvi_3185	0.29	-0.6
3,789,502	+		Echvi_3185	0.30	+0.5
3,789,502	+		Echvi_3185	0.30	+3.3
3,789,503	-		Echvi_3185	0.30	-2.7
3,789,542	+		Echvi_3185	0.35	-2.7
3,789,543	-		Echvi_3185	0.35	-0.6
3,789,548	+		Echvi_3185	0.36	-2.4
3,789,549	-		Echvi_3185	0.36	-2.2
3,789,578	+		Echvi_3185	0.40	-2.6
3,789,605	+		Echvi_3185	0.44	+1.2
3,789,606	-		Echvi_3185	0.44	+1.9
3,789,620	+		Echvi_3185	0.46	+1.1
3,789,620	+		Echvi_3185	0.46	+0.3
3,789,631	-		Echvi_3185	0.47	-2.5
3,789,638	-		Echvi_3185	0.48	-0.6
3,789,652	+		Echvi_3185	0.50	-2.0
3,789,773	+		Echvi_3185	0.66	+0.2
3,789,773	+		Echvi_3185	0.66	+2.0
3,789,774	-		Echvi_3185	0.66	-0.6
3,789,774	-		Echvi_3185	0.66	-0.7
3,789,774	-		Echvi_3185	0.66	-1.2
3,789,786	+		Echvi_3185	0.67	-2.3
3,789,787	-		Echvi_3185	0.68	+0.5
3,789,788	+		Echvi_3185	0.68	-0.9
3,789,788	+		Echvi_3185	0.68	-1.9
3,789,829	+		Echvi_3185	0.73	-3.0
3,789,830	-		Echvi_3185	0.73	-2.4
3,789,830	-		Echvi_3185	0.73	-1.8
3,789,917	+		Echvi_3185	0.85	+1.2
3,789,918	-		Echvi_3185	0.85	-3.6
3,789,918	-		Echvi_3185	0.85	+1.4
3,789,919	+		Echvi_3185	0.85	-0.6
3,789,920	-		Echvi_3185	0.85	+1.9
3,789,972	+				+2.1
3,789,973	-				+1.3
3,789,973	-				+2.7
3,789,973	-				+1.8
3,789,973	-				+0.5
3,790,035	-				-2.5
3,790,035	-				-2.8
3,790,069	-				+0.0
3,790,075	+				-0.2
3,790,076	-				-2.0
3,790,084	+				+1.3
3,790,096	-				+1.2
3,790,147	+				+1.4
3,790,148	-				-2.7
3,790,222	+		Echvi_3186	0.13	+1.7
3,790,222	+		Echvi_3186	0.13	-3.7
3,790,226	-		Echvi_3186	0.14	-0.9
3,790,226	-				+2.7
3,790,226	-		Echvi_3186	0.14	-1.4
3,790,226	-		Echvi_3186	0.14	-0.0
3,790,226	-		Echvi_3186	0.14	+0.3
3,790,226	-		Echvi_3186	0.14	+2.7
3,790,228	+		Echvi_3186	0.14	+1.5
3,790,228	+		Echvi_3186	0.14	+2.3
3,790,228	+		Echvi_3186	0.14	-0.2
3,790,229	-		Echvi_3186	0.15	-0.4
3,790,229	-		Echvi_3186	0.15	+1.7
3,790,229	-		Echvi_3186	0.15	+0.8
3,790,229	-		Echvi_3186	0.15	+1.6
3,790,229	-		Echvi_3186	0.15	+0.2
3,790,229	-		Echvi_3186	0.15	+0.3
3,790,229	-		Echvi_3186	0.15	+0.5
3,790,229	-		Echvi_3186	0.15	-1.5
3,790,229	-		Echvi_3186	0.15	-1.2
3,790,229	-		Echvi_3186	0.15	-1.4
3,790,254	-		Echvi_3186	0.21	+0.3
3,790,292	+		Echvi_3186	0.30	+0.7
3,790,292	+		Echvi_3186	0.30	-3.2
3,790,292	+		Echvi_3186	0.30	+0.0
3,790,293	-		Echvi_3186	0.30	-2.6
3,790,293	-		Echvi_3186	0.30	+1.5
3,790,295	-		Echvi_3186	0.30	+0.2
3,790,295	-		Echvi_3186	0.30	+2.1
3,790,304	+		Echvi_3186	0.32	+1.3
3,790,306	+		Echvi_3186	0.33	+0.8
3,790,307	-		Echvi_3186	0.33	-0.3
3,790,308	+		Echvi_3186	0.33	-0.4
3,790,309	-		Echvi_3186	0.34	-4.0
3,790,314	+		Echvi_3186	0.35	+1.5
3,790,314	+		Echvi_3186	0.35	+1.3
3,790,315	-		Echvi_3186	0.35	-1.5
3,790,315	-		Echvi_3186	0.35	+2.9
3,790,315	-		Echvi_3186	0.35	-0.8
3,790,331	-		Echvi_3186	0.39	-0.2
3,790,414	+		Echvi_3186	0.58	+1.9
3,790,414	+		Echvi_3186	0.58	+1.3
3,790,435	-		Echvi_3186	0.63	+0.8
3,790,435	-		Echvi_3186	0.63	-1.4
3,790,493	+		Echvi_3186	0.77	+0.9
3,790,529	+		Echvi_3186	0.86	+0.6
3,790,530	-		Echvi_3186	0.86	-0.1
3,790,531	+		Echvi_3186	0.86	-0.7
3,790,531	+		Echvi_3186	0.86	-0.1
3,790,531	+		Echvi_3186	0.86	-2.4
3,790,531	+		Echvi_3186	0.86	+0.6
3,790,531	+		Echvi_3186	0.86	+0.9
3,790,532	-		Echvi_3186	0.86	+0.2
3,790,532	-		Echvi_3186	0.86	+1.4
3,790,532	-		Echvi_3186	0.86	+1.5
3,790,532	-		Echvi_3186	0.86	-1.7
3,790,532	-		Echvi_3186	0.86	-1.4
3,790,532	-		Echvi_3186	0.86	-0.5
3,790,532	-		Echvi_3186	0.86	-3.3
3,790,537	-		Echvi_3186	0.87	-2.2
3,790,576	+				+1.6
3,790,577	-				-1.7
3,790,580	+				-0.2
3,790,613	-				-2.0
3,790,717	+		Echvi_3187	0.12	+0.6
3,790,763	-		Echvi_3187	0.16	-1.0
3,790,852	-		Echvi_3187	0.24	+0.2
3,790,852	-		Echvi_3187	0.24	+0.2
3,790,852	-		Echvi_3187	0.24	-1.8
3,790,914	-		Echvi_3187	0.29	+0.3
3,790,918	+		Echvi_3187	0.29	+0.5
3,790,919	-		Echvi_3187	0.30	+3.1
3,790,919	-		Echvi_3187	0.30	-0.7
3,790,919	-		Echvi_3187	0.30	-1.8
3,790,929	+		Echvi_3187	0.30	-1.0
3,790,945	+		Echvi_3187	0.32	-3.7
3,790,966	+		Echvi_3187	0.34	-1.1
3,790,969	+		Echvi_3187	0.34	+1.2
3,790,970	-		Echvi_3187	0.34	-1.5
3,790,988	-		Echvi_3187	0.36	-3.2