Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3122

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,730,046	+				+0.5
3,730,062	-				+1.5
3,730,098	-		Echvi_3120	0.19	+0.6
3,730,214	-		Echvi_3120	0.87	+1.0
3,730,214	-		Echvi_3120	0.87	+1.1
3,730,214	-		Echvi_3120	0.87	-0.3
3,730,214	-		Echvi_3120	0.87	+0.8
3,730,214	-		Echvi_3120	0.87	+2.1
3,730,216	-		Echvi_3120	0.88	+1.4
3,730,216	-		Echvi_3120	0.88	+0.5
3,730,216	-		Echvi_3120	0.88	+0.4
3,730,216	-		Echvi_3120	0.88	-0.2
3,730,216	-		Echvi_3120	0.88	+0.4
3,730,216	-		Echvi_3120	0.88	-1.7
3,730,242	-				-3.1
3,730,267	-				-2.8
3,730,270	-				-3.0
3,730,347	-				-1.4
3,730,351	-				+1.1
3,730,353	+				+2.3
3,730,353	+				+0.5
3,730,355	+				+1.3
3,730,356	-				+1.2
3,730,357	+				+1.7
3,730,357	+				-0.2
3,730,357	+				-1.9
3,730,357	+				+0.3
3,730,357	+				-2.0
3,730,359	+				+1.5
3,730,359	+				-0.2
3,730,359	+				+1.1
3,730,394	+				+0.3
3,730,394	+				-0.6
3,730,422	+				+0.1
3,730,424	+				+1.2
3,730,434	+				-0.5
3,730,435	-				+0.5
3,730,521	+		Echvi_3121	0.20	+1.1
3,730,524	+		Echvi_3121	0.21	-2.1
3,730,525	-		Echvi_3121	0.21	-0.7
3,730,528	+		Echvi_3121	0.21	+2.3
3,730,528	+		Echvi_3121	0.21	+0.2
3,730,544	-		Echvi_3121	0.24	-2.5
3,730,564	+		Echvi_3121	0.28	+0.2
3,730,564	+		Echvi_3121	0.28	+0.6
3,730,564	+		Echvi_3121	0.28	+1.3
3,730,564	+		Echvi_3121	0.28	-1.2
3,730,565	-		Echvi_3121	0.28	+0.5
3,730,565	-		Echvi_3121	0.28	+0.8
3,730,565	-		Echvi_3121	0.28	-3.0
3,730,565	-		Echvi_3121	0.28	-0.5
3,730,565	-		Echvi_3121	0.28	+0.8
3,730,565	-		Echvi_3121	0.28	-2.1
3,730,566	+		Echvi_3121	0.28	-3.7
3,730,576	+		Echvi_3121	0.30	+2.4
3,730,602	-		Echvi_3121	0.34	+2.4
3,730,644	+		Echvi_3121	0.41	+1.8
3,730,644	+		Echvi_3121	0.41	+0.2
3,730,657	-		Echvi_3121	0.43	-0.6
3,730,696	+		Echvi_3121	0.50	-1.7
3,730,697	-		Echvi_3121	0.50	-0.3
3,730,735	-		Echvi_3121	0.57	+1.0
3,730,735	-		Echvi_3121	0.57	-3.0
3,731,002	+				-2.9
3,731,002	+				+1.4
3,731,003	-				+0.8
3,731,003	-				-0.2
3,731,003	-				+2.1
3,731,003	-				-1.0
3,731,046	+				+2.1
3,731,090	+				-1.1
3,731,105	-				+0.4
3,731,105	-				-0.2
3,731,167	+		Echvi_3122	0.13	-2.1
3,731,167	+		Echvi_3122	0.13	+0.6
3,731,167	+		Echvi_3122	0.13	-3.6
3,731,168	-		Echvi_3122	0.13	+1.6
3,731,168	-		Echvi_3122	0.13	-3.1
3,731,168	-		Echvi_3122	0.13	-0.4
3,731,168	-		Echvi_3122	0.13	-2.5
3,731,168	-		Echvi_3122	0.13	+1.3
3,731,168	-		Echvi_3122	0.13	+2.8
3,731,168	-		Echvi_3122	0.13	+0.6
3,731,168	-		Echvi_3122	0.13	-1.5
3,731,185	+		Echvi_3122	0.14	-2.7
3,731,281	+		Echvi_3122	0.21	+1.3
3,731,289	-		Echvi_3122	0.22	-2.8
3,731,289	-		Echvi_3122	0.22	+1.0
3,731,314	-		Echvi_3122	0.23	+1.7
3,731,443	+		Echvi_3122	0.33	+1.9
3,731,450	-		Echvi_3122	0.33	-2.2
3,731,450	-		Echvi_3122	0.33	-0.3
3,731,487	+		Echvi_3122	0.36	-1.4
3,731,487	+		Echvi_3122	0.36	+0.9
3,731,527	+				+1.1
3,731,528	-		Echvi_3122	0.39	-0.9
3,731,538	+		Echvi_3122	0.39	-0.6
3,731,539	-		Echvi_3122	0.39	+0.2
3,731,539	-		Echvi_3122	0.39	-0.3
3,731,628	+		Echvi_3122	0.46	-1.8
3,731,629	-		Echvi_3122	0.46	-1.1
3,731,645	+		Echvi_3122	0.47	-0.9
3,731,646	-		Echvi_3122	0.47	-1.4
3,731,646	-		Echvi_3122	0.47	-1.1
3,731,646	-		Echvi_3122	0.47	+4.1
3,731,646	-		Echvi_3122	0.47	+0.2
3,731,646	-		Echvi_3122	0.47	+0.9
3,731,703	+		Echvi_3122	0.51	+1.9
3,731,704	-		Echvi_3122	0.51	-2.1
3,731,735	+		Echvi_3122	0.53	-1.6
3,731,735	+		Echvi_3122	0.53	-0.3
3,731,735	+		Echvi_3122	0.53	-3.8
3,731,736	-		Echvi_3122	0.54	-2.9
3,731,774	-		Echvi_3122	0.56	+1.5
3,731,862	+		Echvi_3122	0.63	-1.1
3,731,891	+		Echvi_3122	0.65	-2.7
3,731,891	+		Echvi_3122	0.65	+0.3
3,731,891	+		Echvi_3122	0.65	-0.7
3,731,891	+		Echvi_3122	0.65	-1.8
3,731,892	-		Echvi_3122	0.65	-3.1
3,731,892	-		Echvi_3122	0.65	-0.9
3,731,892	-		Echvi_3122	0.65	+1.4
3,731,894	-		Echvi_3122	0.65	+1.3
3,731,914	+		Echvi_3122	0.66	+0.7
3,731,944	+		Echvi_3122	0.68	-3.8
3,731,945	-		Echvi_3122	0.68	+0.3
3,731,946	+		Echvi_3122	0.69	+1.2
3,731,947	-		Echvi_3122	0.69	-2.4
3,731,947	-		Echvi_3122	0.69	-0.4
3,731,956	-		Echvi_3122	0.69	-0.5
3,731,956	-		Echvi_3122	0.69	+1.9
3,732,082	+		Echvi_3122	0.78	+0.5
3,732,152	+		Echvi_3122	0.83	+1.3
3,732,152	+		Echvi_3122	0.83	+0.8
3,732,153	-		Echvi_3122	0.83	-1.9
3,732,153	-		Echvi_3122	0.83	-0.5
3,732,153	-		Echvi_3122	0.83	+0.8
3,732,153	-		Echvi_3122	0.83	-0.7
3,732,153	-		Echvi_3122	0.83	-1.8
3,732,170	-		Echvi_3122	0.85	+1.5
3,732,177	+		Echvi_3122	0.85	-1.6
3,732,177	+		Echvi_3122	0.85	-0.7
3,732,178	-		Echvi_3122	0.85	-2.2
3,732,180	-		Echvi_3122	0.85	-1.7
3,732,180	-		Echvi_3122	0.85	+0.5
3,732,180	-		Echvi_3122	0.85	-1.2
3,732,246	-				+1.5
3,732,310	+				-3.1
3,732,310	+				-1.2
3,732,328	+				-1.9
3,732,328	+				-1.8
3,732,328	+				-1.4
3,732,329	-				-0.7
3,732,329	-				-1.3
3,732,329	-				+1.9
3,732,329	-				+0.8
3,732,360	+				-1.4
3,732,417	+				+2.0
3,732,424	+				+0.3
3,732,424	+				+1.2
3,732,424	+				+1.2
3,732,425	-				+1.6
3,732,425	-				-2.5
3,732,460	+				+0.8
3,732,466	+				+1.1
3,732,468	+				+0.1
3,732,469	-				-2.1
3,732,538	+				-0.8
3,732,538	+				+4.4
3,732,539	-				+1.0
3,732,539	-				+1.2
3,732,541	-				-3.2
3,732,541	-				-1.2
3,732,563	-		Echvi_3123	0.11	-2.5
3,732,602	-		Echvi_3123	0.14	-0.9
3,732,604	+		Echvi_3123	0.14	+1.1
3,732,720	+		Echvi_3123	0.23	-0.5
3,732,721	-		Echvi_3123	0.23	+0.4
3,732,721	-		Echvi_3123	0.23	+0.0
3,732,721	-		Echvi_3123	0.23	-2.8
3,732,721	-		Echvi_3123	0.23	+1.6
3,732,721	-		Echvi_3123	0.23	+1.1
3,732,812	-		Echvi_3123	0.30	-0.1
3,732,812	-		Echvi_3123	0.30	-2.8
3,732,820	+		Echvi_3123	0.31	+2.3
3,732,886	+		Echvi_3123	0.36	-2.4
3,732,886	+		Echvi_3123	0.36	+3.3
3,732,886	+		Echvi_3123	0.36	+0.2
3,732,887	-		Echvi_3123	0.36	-3.2
3,732,888	+		Echvi_3123	0.36	+1.7
3,732,889	-		Echvi_3123	0.36	-2.3
3,732,889	-		Echvi_3123	0.36	+1.4
3,732,948	-		Echvi_3123	0.40	-1.5
3,732,948	-		Echvi_3123	0.40	+0.6
3,732,970	+		Echvi_3123	0.42	-1.6
3,732,971	-		Echvi_3123	0.42	+1.1
3,733,095	+		Echvi_3123	0.51	-0.4
3,733,096	-		Echvi_3123	0.52	-1.4
3,733,098	+		Echvi_3123	0.52	-1.8
3,733,098	+		Echvi_3123	0.52	+1.5
3,733,142	+		Echvi_3123	0.55	+0.5
3,733,143	-		Echvi_3123	0.55	-0.2
3,733,166	+		Echvi_3123	0.57	-1.6
3,733,167	-		Echvi_3123	0.57	+1.5
3,733,167	-		Echvi_3123	0.57	-1.7
3,733,170	+		Echvi_3123	0.57	-2.1
3,733,170	+		Echvi_3123	0.57	-1.7
3,733,170	+		Echvi_3123	0.57	+0.8
3,733,170	+		Echvi_3123	0.57	-2.0
3,733,170	+		Echvi_3123	0.57	+0.9
3,733,171	-		Echvi_3123	0.57	+0.1
3,733,171	-		Echvi_3123	0.57	-4.2
3,733,171	-		Echvi_3123	0.57	-0.7
3,733,171	-		Echvi_3123	0.57	+0.1
3,733,198	+				+0.5
3,733,198	+		Echvi_3123	0.59	+1.2
3,733,205	-		Echvi_3123	0.60	+1.3
3,733,292	-		Echvi_3123	0.66	+1.2
3,733,317	-		Echvi_3123	0.68	+0.1