Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3102

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,704,549	-				-0.2
3,704,575	-				-2.6
3,704,609	+				-1.9
3,704,846	-		Echvi_3101	0.17	-2.6
3,704,846	-		Echvi_3101	0.17	-2.2
3,704,846	-		Echvi_3101	0.17	+1.3
3,704,939	+		Echvi_3101	0.28	-2.2
3,704,940	-		Echvi_3101	0.28	-1.9
3,705,011	+		Echvi_3101	0.37	-1.6
3,705,012	-		Echvi_3101	0.37	-0.2
3,705,012	-		Echvi_3101	0.37	+0.1
3,705,110	+		Echvi_3101	0.49	-0.1
3,705,111	-		Echvi_3101	0.49	+2.1
3,705,111	-				+1.1
3,705,111	-		Echvi_3101	0.49	-0.7
3,705,111	-		Echvi_3101	0.49	+0.8
3,705,125	+		Echvi_3101	0.51	-2.0
3,705,320	-		Echvi_3101	0.75	+0.1
3,705,320	-		Echvi_3101	0.75	+2.5
3,705,320	-		Echvi_3101	0.75	-2.1
3,705,378	-		Echvi_3101	0.82	-0.5
3,705,378	-		Echvi_3101	0.82	-3.5
3,705,380	+		Echvi_3101	0.82	+2.1
3,705,381	-		Echvi_3101	0.82	-0.6
3,705,381	-		Echvi_3101	0.82	-2.8
3,705,381	-		Echvi_3101	0.82	+0.1
3,705,488	-				-0.5
3,705,491	+				-1.1
3,705,492	-				+1.1
3,705,492	-				-0.5
3,705,492	-				-0.7
3,705,557	-				-3.2
3,705,580	-				+1.1
3,705,642	-				-2.9
3,705,661	+				+1.0
3,705,743	-		Echvi_3102	0.14	-2.7
3,705,900	-		Echvi_3102	0.25	+0.3
3,705,906	+		Echvi_3102	0.25	-1.1
3,705,923	+		Echvi_3102	0.26	+1.2
3,705,923	+		Echvi_3102	0.26	+0.8
3,705,923	+		Echvi_3102	0.26	-1.4
3,706,084	+		Echvi_3102	0.38	+1.2
3,706,085	-		Echvi_3102	0.38	-1.2
3,706,092	+		Echvi_3102	0.38	+1.2
3,706,215	+		Echvi_3102	0.47	-0.2
3,706,218	+		Echvi_3102	0.47	-2.9
3,706,219	-		Echvi_3102	0.47	-3.3
3,706,325	-		Echvi_3102	0.55	-0.7
3,706,327	+		Echvi_3102	0.55	-3.2
3,706,362	+		Echvi_3102	0.57	+1.9
3,706,362	+		Echvi_3102	0.57	-1.3
3,706,363	-		Echvi_3102	0.57	-0.9
3,706,448	-		Echvi_3102	0.63	-0.2
3,706,499	+		Echvi_3102	0.67	+0.8
3,706,528	+		Echvi_3102	0.69	-0.4
3,706,531	+		Echvi_3102	0.69	-0.8
3,706,532	-		Echvi_3102	0.69	-2.3
3,706,596	-		Echvi_3102	0.74	+0.5
3,706,599	-		Echvi_3102	0.74	-1.1
3,706,599	-		Echvi_3102	0.74	-0.1
3,706,599	-		Echvi_3102	0.74	-1.1
3,706,599	-		Echvi_3102	0.74	-0.1
3,706,617	+		Echvi_3102	0.75	+0.9
3,706,647	+		Echvi_3102	0.77	-0.5
3,706,667	-		Echvi_3102	0.79	+1.5
3,706,678	+		Echvi_3102	0.79	+0.1
3,706,679	-		Echvi_3102	0.79	+1.5
3,706,727	-		Echvi_3102	0.83	-2.2
3,706,729	-		Echvi_3102	0.83	-1.8
3,706,768	+		Echvi_3102	0.86	-0.5
3,706,891	-				-1.1
3,706,916	+				+2.2
3,706,967	-				+0.8
3,707,010	+				-2.6
3,707,011	-				-1.8
3,707,070	-				-1.2
3,707,164	-				+0.3
3,707,164	-				-2.4
3,707,164	-				-0.6
3,707,166	+				-0.2
3,707,167	-				-1.1
3,707,167	-				-1.4
3,707,167	-				-2.0
3,707,169	+				-2.7
3,707,170	-				-0.1
3,707,174	-				-1.2
3,707,205	-				+1.6
3,707,299	-				-0.8
3,707,304	-				+0.6
3,707,317	+				+0.3
3,707,317	+				+2.1
3,707,317	+				+0.9
3,707,317	+				+0.6
3,707,317	+				-0.1
3,707,326	+				+1.8
3,707,329	-				+1.6
3,707,332	+				+0.5
3,707,332	+				+0.1
3,707,335	+				+3.5
3,707,348	-				+0.0
3,707,375	+				+0.5
3,707,418	+				-0.5
3,707,418	+				-2.0
3,707,418	+				-2.4
3,707,419	-				+1.5
3,707,419	-				-0.0
3,707,475	+		Echvi_3103	0.13	+0.2
3,707,513	+		Echvi_3103	0.17	+2.2
3,707,513	+		Echvi_3103	0.17	-1.4
3,707,593	+		Echvi_3103	0.25	-2.0
3,707,594	-		Echvi_3103	0.25	-1.6
3,707,625	+		Echvi_3103	0.28	-1.1
3,707,625	+		Echvi_3103	0.28	+1.2
3,707,631	-		Echvi_3103	0.29	+1.2
3,707,631	-		Echvi_3103	0.29	+1.5
3,707,699	+		Echvi_3103	0.35	+2.6
3,707,700	-		Echvi_3103	0.35	-0.4
3,707,731	+		Echvi_3103	0.39	-1.2
3,707,731	+		Echvi_3103	0.39	-0.9
3,707,731	+		Echvi_3103	0.39	+1.0
3,707,731	+		Echvi_3103	0.39	-0.1
3,707,732	-		Echvi_3103	0.39	-1.7
3,707,732	-		Echvi_3103	0.39	+2.5
3,707,783	+		Echvi_3103	0.44	-1.7
3,707,859	-		Echvi_3103	0.51	+0.4
3,707,859	-		Echvi_3103	0.51	-1.9
3,707,859	-		Echvi_3103	0.51	+0.9