Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3068 and Echvi_3069 overlap by 47 nucleotides Echvi_3069 and Echvi_3070 are separated by 24 nucleotides Echvi_3070 and Echvi_3071 overlap by 33 nucleotides
Echvi_3068: Echvi_3068 - hypothetical protein, at 3,664,211 to 3,664,447
_3068
Echvi_3069: Echvi_3069 - hypothetical protein, at 3,664,401 to 3,664,997
_3069
Echvi_3070: Echvi_3070 - hypothetical protein, at 3,665,022 to 3,665,171
_3070
Echvi_3071: Echvi_3071 - Mannitol-1-phosphate/altronate dehydrogenases, at 3,665,139 to 3,666,554
_3071
Position (kb)
3665
3666 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 3664.236 kb on + strand, within Echvi_3068 at 3664.383 kb on + strand, within Echvi_3068 at 3664.441 kb on + strand at 3664.442 kb on - strand at 3664.445 kb on + strand at 3664.446 kb on - strand at 3664.450 kb on + strand at 3664.465 kb on + strand, within Echvi_3069 at 3664.466 kb on - strand, within Echvi_3069 at 3664.468 kb on + strand, within Echvi_3069 at 3664.469 kb on - strand, within Echvi_3069 at 3664.525 kb on + strand, within Echvi_3069 at 3664.526 kb on - strand, within Echvi_3069 at 3664.530 kb on + strand, within Echvi_3069 at 3664.531 kb on - strand, within Echvi_3069 at 3664.546 kb on + strand, within Echvi_3069 at 3664.547 kb on - strand, within Echvi_3069 at 3664.602 kb on - strand, within Echvi_3069 at 3664.602 kb on - strand, within Echvi_3069 at 3664.604 kb on + strand at 3664.605 kb on - strand, within Echvi_3069 at 3664.605 kb on - strand, within Echvi_3069 at 3664.623 kb on + strand, within Echvi_3069 at 3664.624 kb on - strand, within Echvi_3069 at 3664.624 kb on - strand, within Echvi_3069 at 3664.625 kb on + strand, within Echvi_3069 at 3664.625 kb on + strand, within Echvi_3069 at 3664.626 kb on - strand, within Echvi_3069 at 3664.626 kb on - strand, within Echvi_3069 at 3664.629 kb on - strand, within Echvi_3069 at 3664.633 kb on + strand, within Echvi_3069 at 3664.633 kb on + strand, within Echvi_3069 at 3664.681 kb on - strand, within Echvi_3069 at 3664.681 kb on - strand, within Echvi_3069 at 3664.699 kb on + strand, within Echvi_3069 at 3664.733 kb on + strand, within Echvi_3069 at 3664.747 kb on + strand, within Echvi_3069 at 3664.792 kb on + strand, within Echvi_3069 at 3664.793 kb on - strand, within Echvi_3069 at 3664.793 kb on - strand, within Echvi_3069 at 3664.793 kb on - strand, within Echvi_3069 at 3664.798 kb on - strand, within Echvi_3069 at 3664.842 kb on - strand, within Echvi_3069 at 3664.871 kb on - strand, within Echvi_3069 at 3664.927 kb on - strand, within Echvi_3069 at 3664.927 kb on - strand, within Echvi_3069 at 3664.927 kb on - strand, within Echvi_3069 at 3664.932 kb on + strand, within Echvi_3069 at 3664.955 kb on + strand at 3664.955 kb on + strand at 3664.955 kb on + strand at 3664.955 kb on + strand at 3664.955 kb on + strand at 3664.956 kb on - strand at 3664.956 kb on - strand at 3664.956 kb on - strand at 3664.956 kb on - strand at 3664.956 kb on - strand at 3664.956 kb on - strand at 3664.957 kb on + strand at 3664.958 kb on - strand at 3664.958 kb on - strand at 3664.974 kb on - strand at 3664.974 kb on - strand at 3664.991 kb on - strand at 3665.031 kb on + strand at 3665.031 kb on + strand at 3665.032 kb on - strand at 3665.133 kb on + strand, within Echvi_3070 at 3665.133 kb on + strand, within Echvi_3070 at 3665.133 kb on + strand, within Echvi_3070 at 3665.134 kb on - strand, within Echvi_3070 at 3665.134 kb on - strand, within Echvi_3070 at 3665.141 kb on - strand at 3665.296 kb on + strand, within Echvi_3071 at 3665.297 kb on - strand, within Echvi_3071 at 3665.344 kb on + strand, within Echvi_3071 at 3665.354 kb on + strand, within Echvi_3071 at 3665.422 kb on + strand, within Echvi_3071 at 3665.422 kb on + strand, within Echvi_3071 at 3665.422 kb on + strand, within Echvi_3071 at 3665.423 kb on - strand, within Echvi_3071 at 3665.423 kb on - strand, within Echvi_3071 at 3665.430 kb on + strand, within Echvi_3071 at 3665.448 kb on + strand, within Echvi_3071 at 3665.631 kb on + strand, within Echvi_3071 at 3665.632 kb on - strand, within Echvi_3071 at 3665.666 kb on - strand, within Echvi_3071 at 3665.671 kb on - strand, within Echvi_3071 at 3665.726 kb on - strand, within Echvi_3071 at 3665.841 kb on + strand, within Echvi_3071 at 3665.922 kb on + strand, within Echvi_3071 at 3665.939 kb on + strand, within Echvi_3071 at 3665.939 kb on + strand, within Echvi_3071 at 3665.939 kb on + strand, within Echvi_3071 at 3665.996 kb on - strand, within Echvi_3071 at 3666.016 kb on - strand, within Echvi_3071 at 3666.101 kb on + strand, within Echvi_3071
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.064 mg/ml remove 3,664,236 + Echvi_3068 0.11 -0.9 3,664,383 + Echvi_3068 0.73 -0.2 3,664,441 + +1.6 3,664,442 - +2.1 3,664,445 + +0.5 3,664,446 - +1.2 3,664,450 + -1.6 3,664,465 + Echvi_3069 0.11 -3.2 3,664,466 - Echvi_3069 0.11 -1.0 3,664,468 + Echvi_3069 0.11 +0.9 3,664,469 - Echvi_3069 0.11 +2.3 3,664,525 + Echvi_3069 0.21 +1.7 3,664,526 - Echvi_3069 0.21 -1.7 3,664,530 + Echvi_3069 0.22 +1.4 3,664,531 - Echvi_3069 0.22 -1.6 3,664,546 + Echvi_3069 0.24 -0.4 3,664,547 - Echvi_3069 0.24 -1.4 3,664,602 - Echvi_3069 0.34 +2.3 3,664,602 - Echvi_3069 0.34 +0.8 3,664,604 + +0.5 3,664,605 - Echvi_3069 0.34 +0.1 3,664,605 - Echvi_3069 0.34 +1.7 3,664,623 + Echvi_3069 0.37 -1.5 3,664,624 - Echvi_3069 0.37 -2.3 3,664,624 - Echvi_3069 0.37 -0.2 3,664,625 + Echvi_3069 0.38 -3.8 3,664,625 + Echvi_3069 0.38 -0.2 3,664,626 - Echvi_3069 0.38 -2.1 3,664,626 - Echvi_3069 0.38 +1.2 3,664,629 - Echvi_3069 0.38 -0.5 3,664,633 + Echvi_3069 0.39 -0.0 3,664,633 + Echvi_3069 0.39 +0.1 3,664,681 - Echvi_3069 0.47 +0.3 3,664,681 - Echvi_3069 0.47 -0.0 3,664,699 + Echvi_3069 0.50 -2.0 3,664,733 + Echvi_3069 0.56 -0.8 3,664,747 + Echvi_3069 0.58 +1.5 3,664,792 + Echvi_3069 0.65 -2.6 3,664,793 - Echvi_3069 0.66 +2.6 3,664,793 - Echvi_3069 0.66 -1.2 3,664,793 - Echvi_3069 0.66 -4.9 3,664,798 - Echvi_3069 0.66 +1.1 3,664,842 - Echvi_3069 0.74 -1.9 3,664,871 - Echvi_3069 0.79 -1.7 3,664,927 - Echvi_3069 0.88 +2.2 3,664,927 - Echvi_3069 0.88 -3.0 3,664,927 - Echvi_3069 0.88 -1.2 3,664,932 + Echvi_3069 0.89 -2.0 3,664,955 + +0.5 3,664,955 + +0.5 3,664,955 + -3.0 3,664,955 + -0.0 3,664,955 + -2.4 3,664,956 - -1.5 3,664,956 - +1.7 3,664,956 - -1.4 3,664,956 - -1.5 3,664,956 - -2.5 3,664,956 - +0.1 3,664,957 + +0.1 3,664,958 - +1.4 3,664,958 - -3.2 3,664,974 - -0.0 3,664,974 - +0.6 3,664,991 - +0.9 3,665,031 + +0.8 3,665,031 + -2.5 3,665,032 - -3.8 3,665,133 + Echvi_3070 0.74 -1.1 3,665,133 + Echvi_3070 0.74 +0.2 3,665,133 + Echvi_3070 0.74 -3.5 3,665,134 - Echvi_3070 0.75 -2.1 3,665,134 - Echvi_3070 0.75 -0.5 3,665,141 - +0.5 3,665,296 + Echvi_3071 0.11 +1.1 3,665,297 - Echvi_3071 0.11 +1.7 3,665,344 + Echvi_3071 0.14 +0.9 3,665,354 + Echvi_3071 0.15 +3.6 3,665,422 + Echvi_3071 0.20 +0.5 3,665,422 + Echvi_3071 0.20 +0.2 3,665,422 + Echvi_3071 0.20 -2.8 3,665,423 - Echvi_3071 0.20 +1.4 3,665,423 - Echvi_3071 0.20 -2.0 3,665,430 + Echvi_3071 0.21 +0.9 3,665,448 + Echvi_3071 0.22 -2.3 3,665,631 + Echvi_3071 0.35 +1.3 3,665,632 - Echvi_3071 0.35 -1.5 3,665,666 - Echvi_3071 0.37 +0.1 3,665,671 - Echvi_3071 0.38 +3.2 3,665,726 - Echvi_3071 0.41 -1.1 3,665,841 + Echvi_3071 0.50 +0.9 3,665,922 + Echvi_3071 0.55 +0.0 3,665,939 + Echvi_3071 0.56 +2.9 3,665,939 + Echvi_3071 0.56 -1.3 3,665,939 + Echvi_3071 0.56 +0.6 3,665,996 - Echvi_3071 0.61 -1.7 3,666,016 - Echvi_3071 0.62 -0.9 3,666,101 + Echvi_3071 0.68 -1.9
Or see this region's nucleotide sequence