Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3039

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,629,270	-		Echvi_3038	0.19	-0.2
3,629,285	-		Echvi_3038	0.21	+1.1
3,629,318	-		Echvi_3038	0.24	+1.9
3,629,318	-		Echvi_3038	0.24	-0.0
3,629,357	+		Echvi_3038	0.28	-1.1
3,629,359	+		Echvi_3038	0.28	+1.4
3,629,359	+		Echvi_3038	0.28	-0.2
3,629,359	+		Echvi_3038	0.28	-0.6
3,629,359	+		Echvi_3038	0.28	-0.2
3,629,359	+		Echvi_3038	0.28	+0.2
3,629,360	-		Echvi_3038	0.28	-0.5
3,629,360	-		Echvi_3038	0.28	-1.2
3,629,360	-		Echvi_3038	0.28	-1.4
3,629,360	-		Echvi_3038	0.28	-1.1
3,629,360	-		Echvi_3038	0.28	+0.4
3,629,360	-		Echvi_3038	0.28	+1.5
3,629,449	+		Echvi_3038	0.37	-2.2
3,629,450	-		Echvi_3038	0.37	-0.8
3,629,517	+		Echvi_3038	0.43	-2.8
3,629,526	+		Echvi_3038	0.44	+1.0
3,629,536	+		Echvi_3038	0.45	-1.5
3,629,537	-		Echvi_3038	0.45	-1.5
3,629,537	-		Echvi_3038	0.45	-0.4
3,629,552	-		Echvi_3038	0.47	-0.1
3,629,599	-		Echvi_3038	0.51	+1.7
3,629,653	+		Echvi_3038	0.57	-0.5
3,629,668	+		Echvi_3038	0.58	+1.1
3,629,732	+		Echvi_3038	0.64	-1.2
3,629,732	+		Echvi_3038	0.64	+1.3
3,629,732	+		Echvi_3038	0.64	+0.7
3,629,732	+		Echvi_3038	0.64	+0.9
3,629,733	-		Echvi_3038	0.65	-1.7
3,629,733	-		Echvi_3038	0.65	+0.9
3,629,733	-		Echvi_3038	0.65	-2.4
3,629,734	+		Echvi_3038	0.65	+1.4
3,629,734	+		Echvi_3038	0.65	+0.9
3,629,735	-		Echvi_3038	0.65	+1.1
3,629,735	-		Echvi_3038	0.65	-2.0
3,629,735	-		Echvi_3038	0.65	+1.0
3,629,736	+		Echvi_3038	0.65	-1.1
3,629,737	-		Echvi_3038	0.65	+1.1
3,629,820	+		Echvi_3038	0.73	+1.3
3,629,854	-		Echvi_3038	0.76	-1.9
3,629,878	+		Echvi_3038	0.79	-0.9
3,629,878	+		Echvi_3038	0.79	+1.3
3,629,879	-		Echvi_3038	0.79	+0.1
3,629,880	+		Echvi_3038	0.79	-0.1
3,629,880	+		Echvi_3038	0.79	+1.1
3,629,898	+		Echvi_3038	0.81	-0.7
3,629,939	-		Echvi_3038	0.85	-1.2
3,629,947	+		Echvi_3038	0.85	-1.8
3,630,133	-				-1.4
3,630,153	+				-1.9
3,630,154	-				+0.2
3,630,178	+				-1.7
3,630,192	+				-0.1
3,630,193	-				-0.5
3,630,193	-				-0.2
3,630,193	-				+0.6
3,630,201	-				+1.9
3,630,212	-				-0.9
3,630,269	-				+0.3
3,630,292	+		Echvi_3039	0.15	+0.7
3,630,317	+		Echvi_3039	0.26	+1.3
3,630,318	-		Echvi_3039	0.26	-1.1
3,630,342	-		Echvi_3039	0.36	-2.2
3,630,371	+		Echvi_3039	0.49	+1.0
3,630,373	+		Echvi_3039	0.50	+2.6
3,630,373	+		Echvi_3039	0.50	+0.6
3,630,373	+		Echvi_3039	0.50	+1.3
3,630,373	+		Echvi_3039	0.50	-0.6
3,630,378	-		Echvi_3039	0.52	+2.2
3,630,378	-		Echvi_3039	0.52	-3.4
3,630,427	+		Echvi_3039	0.73	+0.6
3,630,428	-		Echvi_3039	0.73	+2.5
3,630,429	+		Echvi_3039	0.74	+3.3
3,630,429	+		Echvi_3039	0.74	+1.3
3,630,429	+		Echvi_3039	0.74	+1.6
3,630,452	+		Echvi_3039	0.83	-1.2
3,630,453	-		Echvi_3039	0.84	+0.6
3,630,453	-		Echvi_3039	0.84	-0.5
3,630,488	+				-1.1
3,630,488	+				+1.7
3,630,533	+				-3.1
3,630,537	-				-0.5
3,630,546	+				+0.0
3,630,546	+				+1.4
3,630,546	+				+0.4
3,630,547	-				-1.8
3,630,547	-				-0.2
3,630,568	+				-2.0
3,630,568	+				-0.2
3,630,569	-				-2.6
3,630,569	-				+1.0
3,630,569	-				+0.3
3,630,569	-				+1.1
3,630,600	+				-0.4
3,630,650	+				+0.7
3,630,650	+				-0.6
3,630,651	-				+0.8
3,630,651	-				+1.9
3,630,678	+				-2.6
3,630,686	+				-1.6
3,630,686	+				-1.5
3,630,687	-				+0.9
3,630,687	-				+0.1
3,630,697	+				+0.8
3,630,697	+				+0.3
3,630,697	+				-1.2
3,630,698	-				+1.1
3,630,698	-				+0.1
3,630,703	-				-2.8
3,630,703	-				-0.9
3,630,717	-				-2.1
3,630,746	-				+1.5
3,630,750	+				-0.6
3,630,751	-				+1.3
3,630,751	-				+1.6
3,630,751	-				-2.2
3,630,757	-				-0.4
3,630,763	+				+1.5
3,630,763	+				+1.4
3,630,763	+				-2.7
3,630,763	+				+0.2
3,630,764	-				+0.3
3,630,764	-				+1.2
3,630,778	+				+1.8
3,630,786	+				-2.4
3,630,786	+				-2.1
3,630,787	-				+0.3
3,630,787	-				+1.4
3,630,852	+				-1.8
3,630,853	-				-0.3
3,630,931	+				+1.9
3,630,932	-				-2.4
3,630,946	-				+1.2
3,630,975	+				-2.7
3,630,976	-				-2.1
3,630,976	-				+1.9
3,630,987	-				-0.0
3,631,004	+				-0.2
3,631,005	-				+1.7
3,631,014	-				-1.9
3,631,026	+				-2.5
3,631,026	+				+1.1
3,631,026	+				-0.5
3,631,027	-				-0.7
3,631,027	-				-1.3
3,631,027	-				+1.5
3,631,027	-				-1.1
3,631,027	-				+0.4
3,631,028	+				+1.9
3,631,029	-				+0.1
3,631,029	-				-1.8
3,631,029	-				-3.0
3,631,029	-				+0.1
3,631,066	+				-1.4
3,631,067	-				+0.4
3,631,067	-				-2.2
3,631,136	+				+1.7
3,631,137	-				+0.5
3,631,137	-				-0.5
3,631,140	+				+0.5
3,631,140	+				-0.8
3,631,140	+				+1.6
3,631,140	+				+0.5
3,631,140	+				-3.0
3,631,140	+				-0.7
3,631,140	+				+0.7
3,631,140	+				+0.7
3,631,141	-				+0.7
3,631,141	-				-0.1
3,631,141	-				+1.3
3,631,141	-				+1.1
3,631,141	-				+0.5
3,631,142	+				-0.2
3,631,143	-				-0.6
3,631,143	-				-0.7
3,631,266	-		Echvi_3040	0.12	-0.8
3,631,266	-		Echvi_3040	0.12	-0.2
3,631,284	+		Echvi_3040	0.14	-0.7
3,631,285	-		Echvi_3040	0.14	-3.6
3,631,331	-		Echvi_3040	0.19	+3.5
3,631,348	+		Echvi_3040	0.21	+2.0
3,631,365	+		Echvi_3040	0.23	+1.5
3,631,365	+		Echvi_3040	0.23	-0.9
3,631,365	+		Echvi_3040	0.23	+0.2
3,631,365	+		Echvi_3040	0.23	+1.3
3,631,451	-		Echvi_3040	0.31	-1.5
3,631,476	+		Echvi_3040	0.34	+0.4
3,631,476	+		Echvi_3040	0.34	+0.8
3,631,476	+		Echvi_3040	0.34	+0.2