Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3018

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,605,308	-		Echvi_3017	0.38	+1.9
3,605,308	-		Echvi_3017	0.38	+0.2
3,605,312	+		Echvi_3017	0.38	+0.9
3,605,312	+		Echvi_3017	0.38	-1.9
3,605,313	-		Echvi_3017	0.38	-0.2
3,605,313	-		Echvi_3017	0.38	+1.5
3,605,313	-		Echvi_3017	0.38	-1.8
3,605,313	-		Echvi_3017	0.38	-0.5
3,605,319	-		Echvi_3017	0.39	+0.7
3,605,319	-		Echvi_3017	0.39	+1.1
3,605,319	-		Echvi_3017	0.39	-1.1
3,605,330	-		Echvi_3017	0.39	+2.1
3,605,330	-		Echvi_3017	0.39	-1.8
3,605,330	-		Echvi_3017	0.39	+0.1
3,605,351	+		Echvi_3017	0.41	+2.6
3,605,351	+		Echvi_3017	0.41	+0.4
3,605,351	+		Echvi_3017	0.41	-0.9
3,605,351	+		Echvi_3017	0.41	+1.3
3,605,354	+		Echvi_3017	0.41	+3.2
3,605,354	+		Echvi_3017	0.41	-1.5
3,605,354	+		Echvi_3017	0.41	+1.9
3,605,355	-		Echvi_3017	0.41	+0.4
3,605,355	-		Echvi_3017	0.41	-0.9
3,605,355	-		Echvi_3017	0.41	+0.6
3,605,356	+		Echvi_3017	0.41	-0.6
3,605,358	+		Echvi_3017	0.41	+2.3
3,605,441	-		Echvi_3017	0.47	-1.8
3,605,471	+		Echvi_3017	0.49	-2.4
3,605,471	+		Echvi_3017	0.49	-0.2
3,605,472	-		Echvi_3017	0.49	-2.2
3,605,518	-		Echvi_3017	0.52	+1.5
3,605,662	+		Echvi_3017	0.62	+3.9
3,605,662	+		Echvi_3017	0.62	-0.6
3,605,723	+		Echvi_3017	0.67	+0.2
3,605,810	-		Echvi_3017	0.73	+1.6
3,605,828	-		Echvi_3017	0.74	+1.1
3,605,857	+		Echvi_3017	0.76	-2.6
3,605,858	-		Echvi_3017	0.76	-0.2
3,606,001	-		Echvi_3017	0.86	+0.3
3,606,001	-		Echvi_3017	0.86	+1.0
3,606,006	-		Echvi_3017	0.86	-2.3
3,606,010	+		Echvi_3017	0.86	-1.7
3,606,010	+		Echvi_3017	0.86	-1.7
3,606,010	+		Echvi_3017	0.86	-0.2
3,606,010	+		Echvi_3017	0.86	-0.2
3,606,010	+		Echvi_3017	0.86	-0.2
3,606,011	-		Echvi_3017	0.86	+0.5
3,606,011	-		Echvi_3017	0.86	-0.1
3,606,011	-		Echvi_3017	0.86	-0.3
3,606,011	-		Echvi_3017	0.86	-0.6
3,606,070	+				-2.8
3,606,071	-				+4.1
3,606,071	-				-0.3
3,606,071	-				+1.2
3,606,075	+				-1.4
3,606,076	-				+1.5
3,606,113	-				+0.4
3,606,133	+				+1.2
3,606,134	-				+4.5
3,606,136	+				-0.5
3,606,136	+				-2.5
3,606,137	-				-0.7
3,606,137	-				-1.4
3,606,137	-				+2.7
3,606,137	-				+1.3
3,606,137	-				+1.1
3,606,142	-				-0.2
3,606,244	+				-0.2
3,606,256	+				+0.1
3,606,262	-				-1.7
3,606,274	-				-0.0
3,606,296	-				-0.9
3,606,337	+				+1.1
3,606,339	+				+1.1
3,606,339	+				+1.2
3,606,372	+		Echvi_3018	0.11	-1.8
3,606,402	+		Echvi_3018	0.14	-1.1
3,606,429	+		Echvi_3018	0.18	-2.0
3,606,430	-		Echvi_3018	0.18	-1.8
3,606,430	-		Echvi_3018	0.18	-1.0
3,606,538	+		Echvi_3018	0.31	+0.3
3,606,538	+		Echvi_3018	0.31	-0.9
3,606,539	-		Echvi_3018	0.31	-2.4
3,606,584	-		Echvi_3018	0.37	+0.5
3,606,659	+		Echvi_3018	0.46	+1.2
3,606,660	-		Echvi_3018	0.47	-1.8
3,606,725	-		Echvi_3018	0.55	+2.0
3,606,725	-		Echvi_3018	0.55	+0.5
3,606,738	+		Echvi_3018	0.56	+0.1
3,606,738	+		Echvi_3018	0.56	-2.5
3,606,745	-		Echvi_3018	0.57	-2.7
3,606,745	-		Echvi_3018	0.57	-1.2
3,606,745	-		Echvi_3018	0.57	-2.2
3,606,833	+		Echvi_3018	0.68	-2.7
3,606,834	-		Echvi_3018	0.68	-0.3
3,606,886	-		Echvi_3018	0.75	+1.8
3,606,972	-		Echvi_3018	0.85	+1.4
3,606,981	-		Echvi_3018	0.86	-2.2
3,606,986	+		Echvi_3018	0.87	-0.6
3,606,986	+		Echvi_3018	0.87	-0.7
3,607,074	+				-2.1
3,607,074	+				-3.8
3,607,075	-				+0.7
3,607,085	+				-1.2
3,607,088	-				+1.5
3,607,099	-				+2.1
3,607,142	+				+1.8
3,607,158	-				-1.9
3,607,192	+				-2.6
3,607,193	-				-2.2
3,607,259	-				+0.5
3,607,349	+				+1.9
3,607,366	+				+0.6
3,607,367	-				-0.3
3,607,414	+				+1.6
3,607,414	+				-2.7
3,607,415	-				+0.9
3,607,455	-				-0.2
3,607,455	-				+1.2
3,607,464	+				-0.9
3,607,464	+				+0.9
3,607,464	+				+3.5
3,607,465	-				-1.0
3,607,468	+				-0.5
3,607,505	-				+2.2
3,607,543	+				-2.8
3,607,549	+				+0.1
3,607,566	+				+1.3
3,607,566	+				-0.5
3,607,566	+				-0.4
3,607,566	+				-0.7
3,607,566	+				-1.1
3,607,566	+				-1.9
3,607,566	+				-3.7
3,607,566	+				+0.1
3,607,567	-				-1.3
3,607,567	-				+1.4
3,607,567	-				-0.3
3,607,570	+				-1.2
3,607,571	-				+0.1
3,607,571	-				-0.2
3,607,571	-				+0.5
3,607,571	-				+1.1
3,607,695	-		Echvi_3019	0.15	+2.3
3,607,836	+		Echvi_3019	0.27	+0.4
3,607,836	+		Echvi_3019	0.27	-4.4
3,607,837	-		Echvi_3019	0.27	+0.7
3,607,837	-		Echvi_3019	0.27	-0.7
3,607,837	-		Echvi_3019	0.27	-0.9
3,607,857	-		Echvi_3019	0.29	-0.2
3,607,892	-		Echvi_3019	0.32	+1.8
3,607,945	-		Echvi_3019	0.37	-1.8
3,607,945	-		Echvi_3019	0.37	-1.4
3,608,060	+		Echvi_3019	0.47	+0.1
3,608,060	+		Echvi_3019	0.47	-1.5
3,608,061	-		Echvi_3019	0.47	+1.2
3,608,061	-		Echvi_3019	0.47	+1.2
3,608,069	+		Echvi_3019	0.47	-4.4
3,608,069	+		Echvi_3019	0.47	+0.9
3,608,069	+		Echvi_3019	0.47	-0.4