Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2960

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,536,189	+		Echvi_2958	0.60	-0.7
3,536,194	+		Echvi_2958	0.60	-0.5
3,536,270	+		Echvi_2958	0.65	-2.1
3,536,395	+		Echvi_2958	0.73	-2.8
3,536,396	-		Echvi_2958	0.73	-2.0
3,536,475	-				+2.1
3,536,475	-		Echvi_2958	0.78	+1.4
3,536,522	+		Echvi_2958	0.81	-0.8
3,536,523	-		Echvi_2958	0.81	-1.1
3,536,523	-		Echvi_2958	0.81	+1.2
3,536,557	+		Echvi_2958	0.83	-1.1
3,536,727	+				-0.6
3,536,728	-				-3.3
3,536,729	+				+0.8
3,536,729	+				-0.6
3,536,730	-				-2.3
3,536,730	-				-4.1
3,536,730	-				-0.5
3,536,730	-				+0.1
3,536,730	-				-1.2
3,536,732	+				-1.3
3,536,734	+				-3.6
3,536,735	-				-3.9
3,536,741	-				-0.5
3,536,741	-				-1.3
3,536,752	+				-0.7
3,536,793	-				-3.0
3,536,814	-				-2.1
3,536,814	-				-0.7
3,536,818	-				-2.3
3,536,822	-				+1.5
3,536,822	-				+1.1
3,536,953	+		Echvi_2959	0.54	+0.4
3,536,962	+		Echvi_2959	0.61	-2.9
3,536,963	-		Echvi_2959	0.61	-3.1
3,537,019	+				+1.0
3,537,019	+				+0.2
3,537,062	-				-3.0
3,537,139	+				+4.4
3,537,139	+				+0.9
3,537,139	+				-1.5
3,537,248	+		Echvi_2960	0.54	-1.7
3,537,314	+		Echvi_2960	0.87	-0.5
3,537,315	-		Echvi_2960	0.87	-2.3
3,537,315	-		Echvi_2960	0.87	-2.8
3,537,317	+		Echvi_2960	0.88	+0.7
3,537,317	+		Echvi_2960	0.88	-0.6
3,537,318	-		Echvi_2960	0.89	-1.5
3,537,318	-		Echvi_2960	0.89	-2.8
3,537,353	+				+0.9
3,537,353	+				-0.2
3,537,363	+				+0.7
3,537,384	-				-1.8
3,537,461	+				-0.8
3,537,620	+				+1.7
3,537,621	-				-0.3
3,537,697	-				-1.3
3,537,863	-				+0.9
3,537,934	-				-2.2
3,537,997	-		Echvi_2961	0.45	-2.3
3,537,997	-		Echvi_2961	0.45	+0.8
3,538,000	-		Echvi_2961	0.48	+0.2
3,538,052	+				+2.1
3,538,052	+				-0.5
3,538,053	-				+0.1
3,538,109	+				-0.9
3,538,129	-				-0.5
3,538,130	+				-2.2
3,538,130	+				-0.6
3,538,143	-				-2.2
3,538,191	-		Echvi_2962	0.11	-1.6
3,538,201	+		Echvi_2962	0.11	+1.8
3,538,223	-		Echvi_2962	0.13	-1.6
3,538,223	-		Echvi_2962	0.13	+1.6
3,538,225	-		Echvi_2962	0.13	-0.3
3,538,265	-		Echvi_2962	0.16	-0.9
3,538,274	-		Echvi_2962	0.17	-0.2
3,538,314	+		Echvi_2962	0.19	+0.1
3,538,318	+		Echvi_2962	0.20	-0.5
3,538,319	-		Echvi_2962	0.20	+0.4