Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2934

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,510,689	+				-0.2
3,510,712	-				-0.7
3,510,712	-				-1.7
3,510,800	-				-0.3
3,510,813	-				-0.9
3,510,824	+				-1.9
3,510,828	+				+1.1
3,510,858	+				-1.3
3,510,903	+				-3.1
3,510,925	-				+1.6
3,510,935	+				-0.1
3,510,939	+				+1.2
3,510,939	+				-0.5
3,510,940	-				+0.3
3,510,944	+				-2.3
3,510,945	-				+1.0
3,510,966	+				+1.3
3,510,966	+				-0.3
3,510,967	-				-1.5
3,510,968	+				+0.3
3,510,968	+				-1.2
3,510,968	+				+2.1
3,510,969	-				+2.2
3,510,971	+				-1.1
3,510,972	-				-2.3
3,511,038	+		Echvi_2933	0.17	+1.4
3,511,039	-		Echvi_2933	0.17	-0.1
3,511,039	-		Echvi_2933	0.17	-2.6
3,511,041	+		Echvi_2933	0.17	-1.3
3,511,042	-		Echvi_2933	0.17	-0.2
3,511,089	+		Echvi_2933	0.25	-1.1
3,511,089	+		Echvi_2933	0.25	-2.7
3,511,090	-		Echvi_2933	0.25	-2.4
3,511,100	+		Echvi_2933	0.26	-1.3
3,511,191	+		Echvi_2933	0.40	-0.5
3,511,192	-		Echvi_2933	0.40	+3.1
3,511,192	-		Echvi_2933	0.40	-2.3
3,511,203	-		Echvi_2933	0.42	-2.3
3,511,203	-		Echvi_2933	0.42	-1.4
3,511,203	-		Echvi_2933	0.42	+0.4
3,511,209	+		Echvi_2933	0.42	+1.7
3,511,210	-		Echvi_2933	0.43	-0.5
3,511,234	+		Echvi_2933	0.46	-1.8
3,511,235	-		Echvi_2933	0.46	+2.5
3,511,235	-		Echvi_2933	0.46	+0.2
3,511,239	+		Echvi_2933	0.47	-2.5
3,511,272	+		Echvi_2933	0.52	-0.3
3,511,295	-		Echvi_2933	0.55	+0.5
3,511,393	-		Echvi_2933	0.70	-1.9
3,511,659	+				+0.8
3,511,660	-				+0.5
3,511,752	-				+0.7
3,511,808	-		Echvi_2934	0.10	+0.5
3,511,836	+		Echvi_2934	0.12	-1.8
3,511,932	-		Echvi_2934	0.17	-1.1
3,511,932	-		Echvi_2934	0.17	-0.9
3,511,932	-		Echvi_2934	0.17	+0.5
3,512,044	-		Echvi_2934	0.23	+0.5
3,512,075	+		Echvi_2934	0.25	-2.3
3,512,099	+		Echvi_2934	0.26	+1.3
3,512,099	+		Echvi_2934	0.26	-0.2
3,512,100	-		Echvi_2934	0.26	-2.1
3,512,100	-		Echvi_2934	0.26	-2.0
3,512,143	+		Echvi_2934	0.29	+1.4
3,512,144	-		Echvi_2934	0.29	+2.7
3,512,167	+		Echvi_2934	0.30	-0.3
3,512,167	+		Echvi_2934	0.30	-2.6
3,512,168	-		Echvi_2934	0.30	-0.3
3,512,168	-		Echvi_2934	0.30	-0.2
3,512,188	-		Echvi_2934	0.31	-0.0
3,512,251	-		Echvi_2934	0.35	-1.3
3,512,275	-		Echvi_2934	0.36	-0.3
3,512,292	-		Echvi_2934	0.37	-0.9
3,512,339	+		Echvi_2934	0.40	-0.5
3,512,364	-		Echvi_2934	0.41	+1.2
3,512,381	+		Echvi_2934	0.42	+0.4
3,512,474	-		Echvi_2934	0.47	+0.3
3,512,475	+		Echvi_2934	0.47	-1.5
3,512,475	+		Echvi_2934	0.47	+1.6
3,512,475	+		Echvi_2934	0.47	-1.1
3,512,476	-		Echvi_2934	0.48	-2.6
3,512,476	-		Echvi_2934	0.48	-1.9
3,512,476	-		Echvi_2934	0.48	+0.2
3,512,528	-		Echvi_2934	0.50	-1.9
3,512,528	-		Echvi_2934	0.50	+0.8
3,512,538	+		Echvi_2934	0.51	+1.4
3,512,787	-		Echvi_2934	0.65	+2.8
3,512,829	-		Echvi_2934	0.67	-1.7
3,512,857	-		Echvi_2934	0.69	+0.5
3,512,875	-		Echvi_2934	0.70	+2.2
3,512,919	-		Echvi_2934	0.72	+1.2
3,512,919	-		Echvi_2934	0.72	-0.7
3,513,020	+		Echvi_2934	0.78	-2.7
3,513,020	+		Echvi_2934	0.78	+0.1
3,513,020	+		Echvi_2934	0.78	+0.3
3,513,021	-		Echvi_2934	0.78	-0.5
3,513,021	-		Echvi_2934	0.78	-0.9
3,513,021	-		Echvi_2934	0.78	+0.4
3,513,021	-		Echvi_2934	0.78	+0.1
3,513,021	-		Echvi_2934	0.78	-0.9
3,513,021	-		Echvi_2934	0.78	-0.3
3,513,022	+		Echvi_2934	0.78	-1.3
3,513,022	+		Echvi_2934	0.78	+1.8
3,513,022	+		Echvi_2934	0.78	+1.6
3,513,023	-		Echvi_2934	0.78	-2.8
3,513,023	-		Echvi_2934	0.78	-1.8
3,513,165	-				+2.1
3,513,283	-				-2.5
3,513,326	+				+4.1
3,513,326	+				+1.5
3,513,330	-				-0.6
3,513,373	+				-0.4
3,513,385	+				+0.8
3,513,386	-				-1.6
3,513,392	-				+0.4
3,513,392	-				+2.1
3,513,404	+				+1.1
3,513,405	-				-3.7
3,513,406	+				-1.3
3,513,407	-				-0.3
3,513,423	-				+1.6
3,513,427	-				-0.1
3,513,462	-				+0.4
3,513,462	-				+0.0
3,513,491	+				-0.3
3,513,554	+				-2.5
3,513,558	+				-2.3
3,513,559	-				+1.1
3,513,570	-				-0.6
3,513,570	-				+2.7
3,513,575	-				-0.6
3,513,589	-				-0.9
3,513,614	-				+1.2
3,513,646	+				+0.4
3,513,646	+				-2.1
3,513,646	+				+0.3
3,513,647	-				-2.2
3,513,647	-				-0.5
3,513,679	-				-3.4
3,513,737	+		Echvi_2935	0.10	+1.4
3,513,737	+		Echvi_2935	0.10	+1.0
3,513,742	+		Echvi_2935	0.11	+0.8
3,513,827	+		Echvi_2935	0.16	+3.2
3,513,828	-		Echvi_2935	0.16	-0.9
3,513,856	+		Echvi_2935	0.18	+1.8
3,513,863	+		Echvi_2935	0.18	-2.9
3,513,864	-		Echvi_2935	0.19	-0.3
3,513,864	-		Echvi_2935	0.19	-0.4
3,513,864	-		Echvi_2935	0.19	+2.3
3,513,885	-		Echvi_2935	0.20	+0.0
3,513,896	+		Echvi_2935	0.21	+0.8
3,513,929	+		Echvi_2935	0.23	-2.5
3,513,929	+		Echvi_2935	0.23	+1.4
3,513,929	+		Echvi_2935	0.23	+1.7
3,513,929	+		Echvi_2935	0.23	-1.9
3,513,929	+		Echvi_2935	0.23	+1.8
3,513,936	+		Echvi_2935	0.23	+1.1
3,513,936	+		Echvi_2935	0.23	-0.9
3,513,936	+		Echvi_2935	0.23	-1.1
3,513,937	-		Echvi_2935	0.23	+0.5
3,513,937	-		Echvi_2935	0.23	-0.6
3,513,937	-		Echvi_2935	0.23	+0.9
3,514,077	+		Echvi_2935	0.32	-3.0
3,514,130	+		Echvi_2935	0.36	+1.5
3,514,167	-		Echvi_2935	0.38	+0.1
3,514,168	+		Echvi_2935	0.38	-0.5
3,514,168	+		Echvi_2935	0.38	-1.7
3,514,168	+		Echvi_2935	0.38	-1.5
3,514,169	-		Echvi_2935	0.38	+0.3
3,514,169	-				+0.1
3,514,176	+		Echvi_2935	0.38	+0.2
3,514,180	+		Echvi_2935	0.39	-0.4
3,514,181	-		Echvi_2935	0.39	+0.9
3,514,266	-		Echvi_2935	0.44	-0.7
3,514,317	+		Echvi_2935	0.47	-2.3
3,514,320	+		Echvi_2935	0.48	+1.5