Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2879

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,448,746	+				+0.1
3,448,747	-		Echvi_2877	0.55	-0.3
3,448,747	-		Echvi_2877	0.55	-0.5
3,448,780	-		Echvi_2877	0.58	+0.9
3,448,882	+		Echvi_2877	0.69	+0.4
3,448,882	+		Echvi_2877	0.69	-2.4
3,448,892	-		Echvi_2877	0.70	+1.3
3,448,915	+		Echvi_2877	0.73	-1.7
3,448,916	-		Echvi_2877	0.73	-1.2
3,448,916	-		Echvi_2877	0.73	-3.6
3,448,996	+		Echvi_2877	0.81	+0.9
3,448,996	+		Echvi_2877	0.81	-1.3
3,448,996	+		Echvi_2877	0.81	-1.5
3,448,997	-		Echvi_2877	0.82	-1.0
3,448,997	-		Echvi_2877	0.82	-0.9
3,448,997	-		Echvi_2877	0.82	-0.5
3,448,997	-		Echvi_2877	0.82	-1.5
3,449,005	+		Echvi_2877	0.82	+1.2
3,449,006	-		Echvi_2877	0.82	-1.4
3,449,087	+				-1.8
3,449,159	+				+0.3
3,449,198	-				+2.2
3,449,198	-				+2.3
3,449,248	-		Echvi_2878	0.15	-2.8
3,449,266	-		Echvi_2878	0.19	+0.4
3,449,353	+		Echvi_2878	0.39	+0.1
3,449,354	-		Echvi_2878	0.40	+0.7
3,449,410	-		Echvi_2878	0.53	+0.2
3,449,410	-		Echvi_2878	0.53	+0.6
3,449,410	-		Echvi_2878	0.53	-1.3
3,449,530	+		Echvi_2878	0.81	+3.3
3,449,562	-		Echvi_2878	0.88	+1.8
3,449,683	+				-0.9
3,449,684	-				-2.0
3,449,684	-				+2.3
3,449,693	+				-0.4
3,449,693	+				-1.5
3,449,711	+				+1.2
3,449,778	+		Echvi_2879	0.20	+1.0
3,449,779	-		Echvi_2879	0.20	-0.2
3,449,843	+		Echvi_2879	0.34	-2.0
3,449,843	+		Echvi_2879	0.34	-1.7
3,449,843	+		Echvi_2879	0.34	-0.4
3,449,843	+		Echvi_2879	0.34	-1.7
3,449,844	-		Echvi_2879	0.34	-2.7
3,449,844	-		Echvi_2879	0.34	+0.0
3,449,889	+		Echvi_2879	0.44	-3.2
3,449,911	+		Echvi_2879	0.48	-0.9
3,449,912	-		Echvi_2879	0.49	-1.7
3,449,914	+		Echvi_2879	0.49	-0.3
3,449,915	-		Echvi_2879	0.49	-1.6
3,449,915	-		Echvi_2879	0.49	-0.1
3,449,952	-		Echvi_2879	0.57	+2.3
3,449,984	+		Echvi_2879	0.64	+2.7
3,449,985	-		Echvi_2879	0.64	-1.6
3,450,004	+		Echvi_2879	0.68	+1.4
3,450,005	-		Echvi_2879	0.68	+0.8
3,450,014	+		Echvi_2879	0.70	+1.5
3,450,015	-		Echvi_2879	0.71	-0.1
3,450,015	-		Echvi_2879	0.71	-0.7
3,450,050	+		Echvi_2879	0.78	+0.5
3,450,100	-		Echvi_2879	0.89	-2.7
3,450,109	+				+2.1
3,450,140	+				+0.2
3,450,156	-				+2.1
3,450,160	+				+0.8
3,450,160	+				-3.0
3,450,160	+				-1.6
3,450,160	+				-2.2
3,450,161	-				-0.0
3,450,163	+				-0.7
3,450,164	-				-1.4
3,450,164	-				+0.2
3,450,164	-				-1.1
3,450,250	+				+1.8
3,450,333	+		Echvi_2880	0.13	-0.9
3,450,334	-		Echvi_2880	0.14	-1.2
3,450,338	+		Echvi_2880	0.14	-1.1
3,450,339	-		Echvi_2880	0.14	-1.5
3,450,339	-		Echvi_2880	0.14	-1.1
3,450,340	+		Echvi_2880	0.14	+2.1
3,450,372	-		Echvi_2880	0.17	+1.3
3,450,376	+		Echvi_2880	0.18	+1.3
3,450,376	+		Echvi_2880	0.18	+1.1
3,450,377	-		Echvi_2880	0.18	-1.7
3,450,387	+		Echvi_2880	0.19	-0.4
3,450,402	-		Echvi_2880	0.20	-0.0
3,450,461	+		Echvi_2880	0.26	+0.3
3,450,484	+		Echvi_2880	0.28	-1.1
3,450,485	-		Echvi_2880	0.28	+0.8
3,450,581	+		Echvi_2880	0.37	+2.1
3,450,582	-		Echvi_2880	0.37	+0.5
3,450,599	-		Echvi_2880	0.39	-1.2
3,450,750	-		Echvi_2880	0.53	-1.2
3,450,752	+		Echvi_2880	0.53	-3.2
3,450,753	-		Echvi_2880	0.53	+1.8
3,450,753	-		Echvi_2880	0.53	+1.9
3,450,839	-		Echvi_2880	0.62	+0.2
3,450,907	+		Echvi_2880	0.68	-0.5
3,450,913	-		Echvi_2880	0.69	-0.7
3,450,965	+		Echvi_2880	0.74	+0.7
3,450,975	-		Echvi_2880	0.74	-2.3
3,451,014	+		Echvi_2880	0.78	+3.1
3,451,014	+		Echvi_2880	0.78	-0.5
3,451,014	+		Echvi_2880	0.78	+0.4
3,451,014	+		Echvi_2880	0.78	-2.0
3,451,014	+		Echvi_2880	0.78	+1.0
3,451,015	-		Echvi_2880	0.78	-0.9
3,451,015	-		Echvi_2880	0.78	-2.2
3,451,015	-		Echvi_2880	0.78	-1.9
3,451,015	-		Echvi_2880	0.78	+1.4
3,451,015	-		Echvi_2880	0.78	-1.6
3,451,015	-		Echvi_2880	0.78	+1.2
3,451,020	+		Echvi_2880	0.79	+0.6
3,451,021	-		Echvi_2880	0.79	+0.9
3,451,059	+		Echvi_2880	0.82	+0.5
3,451,060	-		Echvi_2880	0.83	-2.2
3,451,060	-		Echvi_2880	0.83	-0.8
3,451,071	-		Echvi_2880	0.84	+2.4
3,451,089	+		Echvi_2880	0.85	-0.3
3,451,107	-		Echvi_2880	0.87	+0.7
3,451,133	-		Echvi_2880	0.89	+1.9
3,451,139	-				-0.4
3,451,139	-				+0.4