Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2870

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,439,074	-				-0.2
3,439,234	+				-2.1
3,439,234	+				-0.0
3,439,234	+				+0.7
3,439,235	-				+0.2
3,439,235	-				-1.4
3,439,284	+		Echvi_2869	0.19	-0.5
3,439,284	+		Echvi_2869	0.19	-1.7
3,439,285	-		Echvi_2869	0.19	+0.8
3,439,285	-		Echvi_2869	0.19	+1.4
3,439,285	-		Echvi_2869	0.19	+0.1
3,439,285	-		Echvi_2869	0.19	+0.1
3,439,285	-		Echvi_2869	0.19	+2.6
3,439,285	-		Echvi_2869	0.19	+0.7
3,439,316	+		Echvi_2869	0.25	-3.2
3,439,316	+		Echvi_2869	0.25	+0.5
3,439,316	+		Echvi_2869	0.25	-3.2
3,439,317	-		Echvi_2869	0.25	-1.1
3,439,317	-		Echvi_2869	0.25	-2.2
3,439,395	+		Echvi_2869	0.40	-3.4
3,439,396	-		Echvi_2869	0.40	+1.5
3,439,396	-		Echvi_2869	0.40	-2.7
3,439,396	-		Echvi_2869	0.40	+1.9
3,439,406	-		Echvi_2869	0.42	+1.7
3,439,445	+		Echvi_2869	0.49	-3.3
3,439,448	+		Echvi_2869	0.49	+2.4
3,439,484	-		Echvi_2869	0.56	-0.7
3,439,484	-		Echvi_2869	0.56	+0.7
3,439,560	-		Echvi_2869	0.70	+2.7
3,439,565	-		Echvi_2869	0.71	+2.4
3,439,585	+		Echvi_2869	0.75	-0.3
3,439,588	+		Echvi_2869	0.76	+0.4
3,439,634	+		Echvi_2869	0.84	-0.7
3,439,634	+		Echvi_2869	0.84	+0.2
3,439,639	+		Echvi_2869	0.85	-1.0
3,439,640	-		Echvi_2869	0.85	+1.6
3,439,641	+		Echvi_2869	0.86	-2.2
3,439,641	+		Echvi_2869	0.86	+1.1
3,439,641	+		Echvi_2869	0.86	+0.6
3,439,642	-		Echvi_2869	0.86	+1.7
3,439,682	-				+0.5
3,439,700	-				-2.1
3,439,770	+				-2.9
3,439,861	+				-0.3
3,439,861	+				+2.2
3,439,861	+				+0.2
3,439,862	-				+1.6
3,439,862	-				-1.8
3,439,862	-				+1.1
3,439,891	+				+1.7
3,439,954	-				+0.1
3,439,964	-				-2.8
3,439,987	-				+2.9
3,440,080	+				+1.1
3,440,178	-				+3.0
3,440,178	-				+1.1
3,440,229	+		Echvi_2870	0.13	+1.3
3,440,229	+		Echvi_2870	0.13	+1.3
3,440,230	-		Echvi_2870	0.13	-1.3
3,440,230	-		Echvi_2870	0.13	-0.9
3,440,230	-		Echvi_2870	0.13	-1.7
3,440,230	-		Echvi_2870	0.13	-0.7
3,440,319	+		Echvi_2870	0.18	+1.7
3,440,320	-		Echvi_2870	0.18	-3.2
3,440,320	-		Echvi_2870	0.18	-0.7
3,440,328	-		Echvi_2870	0.19	+1.2
3,440,341	+		Echvi_2870	0.19	+2.6
3,440,341	+		Echvi_2870	0.19	-0.2
3,440,342	-		Echvi_2870	0.19	-1.1
3,440,342	-		Echvi_2870	0.19	+1.4
3,440,342	-		Echvi_2870	0.19	+3.3
3,440,368	+		Echvi_2870	0.21	-4.1
3,440,369	-		Echvi_2870	0.21	-1.8
3,440,397	-		Echvi_2870	0.23	+2.1
3,440,397	-		Echvi_2870	0.23	-2.7
3,440,481	-		Echvi_2870	0.28	+1.6
3,440,519	+		Echvi_2870	0.30	+1.5
3,440,520	-		Echvi_2870	0.30	-0.7
3,440,551	-		Echvi_2870	0.32	-0.1
3,440,589	-		Echvi_2870	0.34	+0.7
3,440,617	+		Echvi_2870	0.36	-3.9
3,440,642	-		Echvi_2870	0.38	-1.2
3,440,742	-		Echvi_2870	0.44	-0.9
3,440,755	+		Echvi_2870	0.44	-0.3
3,440,756	-		Echvi_2870	0.44	+1.2
3,440,780	+		Echvi_2870	0.46	-0.5
3,440,780	+		Echvi_2870	0.46	-0.7
3,440,780	+		Echvi_2870	0.46	+1.6
3,440,780	+		Echvi_2870	0.46	-1.2
3,440,781	-		Echvi_2870	0.46	+0.2
3,440,781	-		Echvi_2870	0.46	+0.3
3,440,781	-		Echvi_2870	0.46	+0.2
3,440,781	-		Echvi_2870	0.46	+1.0
3,440,781	-		Echvi_2870	0.46	-1.6
3,440,781	-		Echvi_2870	0.46	+1.1
3,440,785	+		Echvi_2870	0.46	+0.5
3,440,785	+		Echvi_2870	0.46	+0.5
3,440,786	-		Echvi_2870	0.46	-0.2
3,440,786	-		Echvi_2870	0.46	+3.3
3,440,802	-		Echvi_2870	0.47	-0.3
3,440,824	+		Echvi_2870	0.48	-0.5
3,440,825	-		Echvi_2870	0.49	-0.2
3,440,846	+		Echvi_2870	0.50	+2.7
3,440,846	+		Echvi_2870	0.50	+0.5
3,440,847	-		Echvi_2870	0.50	+3.1
3,440,909	-		Echvi_2870	0.54	+1.0
3,440,921	+		Echvi_2870	0.54	+3.1
3,440,964	+		Echvi_2870	0.57	+1.4
3,440,964	+		Echvi_2870	0.57	+0.8
3,440,964	+		Echvi_2870	0.57	-1.3
3,440,964	+		Echvi_2870	0.57	+0.5
3,440,964	+		Echvi_2870	0.57	+2.4
3,440,965	-		Echvi_2870	0.57	+2.1
3,440,965	-		Echvi_2870	0.57	+2.1
3,440,965	-		Echvi_2870	0.57	-1.7
3,440,965	-		Echvi_2870	0.57	+2.0
3,440,965	-		Echvi_2870	0.57	+1.9
3,440,965	-		Echvi_2870	0.57	+1.3
3,440,965	-		Echvi_2870	0.57	-1.8
3,440,965	-		Echvi_2870	0.57	+0.7
3,440,965	-		Echvi_2870	0.57	+1.9
3,440,965	-		Echvi_2870	0.57	+2.3
3,440,965	-		Echvi_2870	0.57	+2.7
3,441,018	+		Echvi_2870	0.60	-0.2
3,441,033	+		Echvi_2870	0.61	+0.5
3,441,034	-		Echvi_2870	0.61	+0.5
3,441,034	-		Echvi_2870	0.61	+0.7
3,441,034	-		Echvi_2870	0.61	+2.0
3,441,056	-		Echvi_2870	0.62	-0.2
3,441,056	-		Echvi_2870	0.62	-2.2
3,441,056	-		Echvi_2870	0.62	-2.6
3,441,070	-		Echvi_2870	0.63	+3.1
3,441,070	-		Echvi_2870	0.63	+0.0
3,441,073	+		Echvi_2870	0.63	-1.1
3,441,076	-		Echvi_2870	0.64	+0.1
3,441,302	+		Echvi_2870	0.77	+0.8
3,441,302	+		Echvi_2870	0.77	-0.3
3,441,303	-		Echvi_2870	0.77	-1.9
3,441,303	-		Echvi_2870	0.77	+1.6
3,441,303	-		Echvi_2870	0.77	+1.4
3,441,306	+		Echvi_2870	0.77	+1.0
3,441,307	-		Echvi_2870	0.78	+1.4
3,441,352	-		Echvi_2870	0.80	-1.6
3,441,392	-		Echvi_2870	0.83	+0.2
3,441,393	+		Echvi_2870	0.83	+1.4
3,441,393	+		Echvi_2870	0.83	-0.9
3,441,394	-		Echvi_2870	0.83	+0.1
3,441,394	-		Echvi_2870	0.83	-2.8
3,441,468	+		Echvi_2870	0.87	-2.6
3,441,631	-				+2.0
3,441,631	-				-0.2
3,441,661	+				+0.9
3,441,662	-				+2.3
3,441,662	-				-0.7
3,441,667	+				-0.8
3,441,667	+				-0.3
3,441,671	-				-2.2
3,441,693	+				+0.5
3,441,696	+				-1.2
3,441,748	+				+2.0
3,441,748	+				-2.7
3,441,749	-				-1.2
3,441,861	+				-0.7
3,441,906	+		Echvi_2871	0.13	-0.2
3,441,976	-		Echvi_2871	0.21	-2.2
3,441,992	+		Echvi_2871	0.22	+0.5
3,441,997	+		Echvi_2871	0.23	-0.9
3,442,045	+		Echvi_2871	0.28	+1.4
3,442,045	+		Echvi_2871	0.28	-1.6
3,442,045	+		Echvi_2871	0.28	+0.3
3,442,046	-		Echvi_2871	0.28	-1.0
3,442,046	-		Echvi_2871	0.28	+1.1
3,442,046	-		Echvi_2871	0.28	+1.0
3,442,046	-		Echvi_2871	0.28	-0.7
3,442,046	-		Echvi_2871	0.28	-1.6
3,442,046	-		Echvi_2871	0.28	+1.6
3,442,100	+		Echvi_2871	0.34	-1.5
3,442,231	+		Echvi_2871	0.48	-3.3
3,442,231	+		Echvi_2871	0.48	-0.4
3,442,232	-		Echvi_2871	0.48	+0.2
3,442,232	-		Echvi_2871	0.48	+0.1
3,442,235	-		Echvi_2871	0.48	+1.5
3,442,243	-		Echvi_2871	0.49	+1.1
3,442,294	-		Echvi_2871	0.54	-0.7
3,442,370	+		Echvi_2871	0.63	-0.3
3,442,371	-		Echvi_2871	0.63	-3.0
3,442,384	-		Echvi_2871	0.64	-1.6
3,442,529	-		Echvi_2871	0.79	-3.7
3,442,529	-		Echvi_2871	0.79	+2.1
3,442,534	+		Echvi_2871	0.80	-1.8
3,442,535	-		Echvi_2871	0.80	+1.1
3,442,535	-		Echvi_2871	0.80	+0.9
3,442,551	+		Echvi_2871	0.82	-2.4
3,442,552	-		Echvi_2871	0.82	+1.1
3,442,556	-		Echvi_2871	0.82	+0.5
3,442,559	-		Echvi_2871	0.83	+0.8
3,442,559	-		Echvi_2871	0.83	-1.5
3,442,584	-		Echvi_2871	0.85	+0.1
3,442,658	-				-1.9
3,442,658	-				-2.1
3,442,658	-				-0.5
3,442,658	-				-2.6
3,442,658	-				+2.7