Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2845

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,406,771	+		Echvi_2843	0.79	-1.1
3,406,772	-		Echvi_2843	0.79	+0.9
3,406,775	-		Echvi_2843	0.80	+2.2
3,406,792	+		Echvi_2843	0.81	+1.1
3,406,793	-		Echvi_2843	0.81	-0.5
3,406,826	-		Echvi_2843	0.84	+0.3
3,406,828	+		Echvi_2843	0.84	+1.2
3,406,847	+		Echvi_2843	0.86	+0.7
3,406,847	+		Echvi_2843	0.86	+0.0
3,406,921	+				-0.8
3,406,922	-				+1.2
3,406,953	-				+1.9
3,406,969	+				-0.2
3,406,970	-				-3.0
3,406,970	-				-2.6
3,406,977	-				+1.6
3,406,977	-				+2.6
3,406,981	+				-0.7
3,407,033	+				-1.1
3,407,034	-				-0.4
3,407,041	+				+0.3
3,407,041	+				+3.1
3,407,042	-				+2.3
3,407,094	-		Echvi_2844	0.17	+1.8
3,407,130	-		Echvi_2844	0.22	-0.1
3,407,132	+		Echvi_2844	0.22	+1.5
3,407,132	+		Echvi_2844	0.22	-2.2
3,407,133	-		Echvi_2844	0.23	-2.1
3,407,153	-		Echvi_2844	0.26	-1.7
3,407,158	+		Echvi_2844	0.26	-1.1
3,407,222	+		Echvi_2844	0.36	+1.2
3,407,256	+		Echvi_2844	0.41	-1.7
3,407,291	-		Echvi_2844	0.47	+1.5
3,407,360	-		Echvi_2844	0.57	+0.7
3,407,466	-		Echvi_2844	0.74	+2.4
3,407,503	+		Echvi_2844	0.79	+0.0
3,407,504	-		Echvi_2844	0.79	+2.2
3,407,553	+		Echvi_2844	0.87	-1.4
3,407,554	-		Echvi_2844	0.87	-0.2
3,407,554	-		Echvi_2844	0.87	-1.8
3,407,555	+		Echvi_2844	0.87	-0.2
3,407,556	-		Echvi_2844	0.87	-2.2
3,407,627	-				+1.7
3,407,644	-				+2.7
3,407,644	-				+0.6
3,407,648	+				+0.5
3,407,649	-				+2.1
3,407,649	-				+1.5
3,407,649	-				-3.4
3,407,649	-				-2.2
3,407,650	+				-1.8
3,407,659	-				-2.4
3,407,672	+				-0.1
3,407,672	+				-0.1
3,407,672	+				+1.1
3,407,673	-				-1.9
3,407,676	+				-3.0
3,407,677	-				-0.5
3,407,720	+				-0.9
3,407,720	+				+0.1
3,407,721	-				+1.7
3,407,723	+				+2.2
3,407,723	+				+1.4
3,407,723	+				+1.3
3,407,733	-				-1.4
3,407,879	+		Echvi_2845	0.13	+0.5
3,407,942	+		Echvi_2845	0.19	+1.1
3,407,949	+		Echvi_2845	0.19	+1.5
3,407,949	+		Echvi_2845	0.19	-0.5
3,407,950	-		Echvi_2845	0.20	-4.5
3,407,976	+		Echvi_2845	0.22	-1.7
3,408,069	+		Echvi_2845	0.31	-0.5
3,408,069	+		Echvi_2845	0.31	+0.6
3,408,168	+		Echvi_2845	0.41	-2.9
3,408,168	+		Echvi_2845	0.41	-2.6
3,408,168	+		Echvi_2845	0.41	-0.9
3,408,169	-		Echvi_2845	0.41	-2.2
3,408,169	-		Echvi_2845	0.41	-0.7
3,408,171	-		Echvi_2845	0.41	+1.1
3,408,171	-		Echvi_2845	0.41	-0.6
3,408,238	+		Echvi_2845	0.47	+0.6
3,408,238	+		Echvi_2845	0.47	+0.5
3,408,272	-		Echvi_2845	0.51	+0.2
3,408,355	+		Echvi_2845	0.59	-2.1
3,408,356	-		Echvi_2845	0.59	-1.1
3,408,500	+		Echvi_2845	0.73	-3.7
3,408,501	-		Echvi_2845	0.73	-2.4
3,408,501	-		Echvi_2845	0.73	+0.9
3,408,615	+		Echvi_2845	0.84	+0.1
3,408,615	+		Echvi_2845	0.84	+1.0
3,408,775	-				-1.5
3,408,814	+				+1.6
3,408,817	+				+1.2
3,408,975	-				-0.7
3,408,995	+				-0.2
3,408,996	-				+0.1
3,408,996	-				-3.0
3,408,996	-				-1.6
3,409,005	+				-0.7
3,409,005	+				-1.3
3,409,005	+				+1.4
3,409,148	+				+1.2
3,409,163	+				-0.9
3,409,183	+				-1.7
3,409,341	+				+3.7
3,409,341	+				+0.7
3,409,341	+				-1.2
3,409,342	-				+0.8
3,409,388	+				+2.1
3,409,411	+				-0.5
3,409,411	+				-1.2
3,409,412	-				-0.9
3,409,418	-				+2.0
3,409,421	+				-1.2
3,409,441	+				-0.2
3,409,441	+				-1.1
3,409,442	-				-1.9
3,409,477	+		Echvi_2846	0.11	-1.2
3,409,477	+		Echvi_2846	0.11	-0.7
3,409,486	+		Echvi_2846	0.11	-2.7
3,409,487	-		Echvi_2846	0.11	-2.6
3,409,540	+		Echvi_2846	0.13	-2.8
3,409,567	+		Echvi_2846	0.14	-2.0
3,409,761	-		Echvi_2846	0.21	-0.7