Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2731

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,252,140	-				+0.8
3,252,266	+				-0.2
3,252,268	+				+2.1
3,252,290	-				-1.7
3,252,301	+				+1.1
3,252,310	+				-0.1
3,252,310	+				+1.9
3,252,310	+				+1.2
3,252,311	-				+1.1
3,252,311	-				-2.9
3,252,311	-				+0.5
3,252,323	+				-0.4
3,252,407	+				+2.7
3,252,440	+		Echvi_2730	0.12	+1.1
3,252,467	+		Echvi_2730	0.15	+2.2
3,252,468	-		Echvi_2730	0.15	-2.4
3,252,473	-		Echvi_2730	0.16	+0.5
3,252,575	+		Echvi_2730	0.29	-1.0
3,252,577	+		Echvi_2730	0.29	-2.6
3,252,577	+		Echvi_2730	0.29	-0.6
3,252,577	+		Echvi_2730	0.29	+0.1
3,252,578	-		Echvi_2730	0.29	+1.3
3,252,578	-		Echvi_2730	0.29	-1.8
3,252,585	+		Echvi_2730	0.30	-1.3
3,252,599	+		Echvi_2730	0.32	-0.4
3,252,640	-		Echvi_2730	0.37	-0.6
3,252,722	-		Echvi_2730	0.48	-3.4
3,252,722	-		Echvi_2730	0.48	-1.2
3,252,774	+		Echvi_2730	0.54	-1.2
3,252,775	-		Echvi_2730	0.55	+0.2
3,252,775	-		Echvi_2730	0.55	-2.7
3,252,967	+		Echvi_2730	0.79	+1.3
3,252,996	+		Echvi_2730	0.83	+1.7
3,252,996	+		Echvi_2730	0.83	+0.4
3,252,997	-		Echvi_2730	0.83	+2.8
3,253,005	-		Echvi_2730	0.84	+1.9
3,253,110	+				-3.1
3,253,135	-				-2.0
3,253,184	+				-2.7
3,253,199	+				+0.4
3,253,218	+				-1.5
3,253,242	-		Echvi_2731	0.12	+1.2
3,253,293	+		Echvi_2731	0.16	-0.4
3,253,294	-		Echvi_2731	0.16	-1.2
3,253,305	+		Echvi_2731	0.17	+3.2
3,253,348	-		Echvi_2731	0.21	-1.0
3,253,420	+		Echvi_2731	0.28	+4.6
3,253,420	+		Echvi_2731	0.28	-2.5
3,253,432	-				+0.1
3,253,495	+		Echvi_2731	0.35	-1.8
3,253,496	-		Echvi_2731	0.35	+2.8
3,253,496	-		Echvi_2731	0.35	+2.1
3,253,496	-		Echvi_2731	0.35	-0.9
3,253,659	-		Echvi_2731	0.50	-0.4
3,253,663	-		Echvi_2731	0.50	+0.8
3,253,722	+		Echvi_2731	0.56	+0.6
3,253,722	+		Echvi_2731	0.56	+2.1
3,253,723	-		Echvi_2731	0.56	+0.4
3,253,725	+		Echvi_2731	0.56	-0.2
3,253,755	+		Echvi_2731	0.59	+0.2
3,253,756	-		Echvi_2731	0.59	+1.0
3,253,861	-		Echvi_2731	0.69	-1.9
3,253,861	-		Echvi_2731	0.69	-0.0
3,253,862	+		Echvi_2731	0.69	-1.0
3,253,863	-		Echvi_2731	0.69	+1.8
3,253,872	+		Echvi_2731	0.70	+1.1
3,253,872	+		Echvi_2731	0.70	-0.7
3,253,873	-		Echvi_2731	0.70	+0.7
3,253,873	-		Echvi_2731	0.70	-0.6
3,253,873	-		Echvi_2731	0.70	-1.0
3,253,928	+		Echvi_2731	0.75	+1.1
3,253,951	-		Echvi_2731	0.77	+0.2
3,253,963	+		Echvi_2731	0.78	+0.8
3,253,963	+		Echvi_2731	0.78	+0.4
3,253,963	+		Echvi_2731	0.78	-1.9
3,254,061	+		Echvi_2731	0.87	-2.6
3,254,072	-		Echvi_2731	0.88	+0.1
3,254,136	+				-1.9
3,254,148	+				+1.9
3,254,157	-				-0.8
3,254,170	-				+0.1
3,254,345	+				-0.3
3,254,349	+				-1.6
3,254,352	+				-3.3
3,254,382	+				+0.6
3,254,432	-				-0.2
3,254,451	-				-0.7
3,254,473	-				-2.7
3,254,473	-				+0.6
3,254,508	-				-0.4
3,254,543	-				+1.7
3,254,543	-				+0.3
3,254,543	-				+2.0
3,254,549	+				-3.0
3,254,549	+				+1.0
3,254,550	-				-2.8
3,254,550	-				-0.3
3,254,550	-				+0.5
3,254,550	-				+1.0
3,254,553	+				-3.1
3,254,586	-				+1.9
3,254,586	-				+2.6
3,254,613	+				+0.2
3,254,614	-				+3.5
3,254,614	-				+0.9
3,254,642	-				+2.3
3,254,644	+				-0.2
3,254,645	-				-0.1
3,254,649	+				+1.6
3,254,650	-				-1.7
3,254,650	-				+1.0
3,254,695	+				+1.2
3,254,750	+				+0.6
3,254,750	+				-2.0
3,254,751	-				-0.2
3,254,771	+				-0.2
3,254,775	-				-2.1
3,254,793	+				-2.3
3,254,917	+		Echvi_2733	0.23	-2.4
3,254,917	+		Echvi_2733	0.23	+1.1
3,254,917	+		Echvi_2733	0.23	+1.8
3,254,918	-		Echvi_2733	0.24	-2.3
3,254,918	-		Echvi_2733	0.24	-1.2
3,254,918	-		Echvi_2733	0.24	-2.0
3,254,918	-		Echvi_2733	0.24	+3.3
3,254,918	-		Echvi_2733	0.24	-1.4
3,254,918	-		Echvi_2733	0.24	+0.6
3,254,918	-		Echvi_2733	0.24	-2.4
3,254,922	-		Echvi_2733	0.26	-0.9
3,254,929	+		Echvi_2733	0.28	-2.7
3,254,935	+		Echvi_2733	0.31	-2.3
3,254,936	-		Echvi_2733	0.31	-0.6
3,254,936	-		Echvi_2733	0.31	-0.9
3,254,936	-		Echvi_2733	0.31	+1.2
3,254,953	+		Echvi_2733	0.38	+3.5
3,254,953	+		Echvi_2733	0.38	-2.4
3,254,954	-		Echvi_2733	0.39	+1.1
3,254,973	+		Echvi_2733	0.47	-1.3
3,254,973	+		Echvi_2733	0.47	+1.3
3,255,004	+		Echvi_2733	0.59	-0.2
3,255,041	-		Echvi_2733	0.74	+1.2
3,255,041	-		Echvi_2733	0.74	+0.7
3,255,049	-		Echvi_2733	0.78	+2.7
3,255,054	+		Echvi_2733	0.80	-0.2
3,255,055	-		Echvi_2733	0.80	+3.0
3,255,069	+		Echvi_2733	0.86	-1.9
3,255,069	+		Echvi_2733	0.86	+1.9
3,255,070	-		Echvi_2733	0.86	-0.2
3,255,078	+				-1.0
3,255,078	+				+0.6
3,255,089	+				+2.3
3,255,090	-				+0.1
3,255,111	+				+0.2
3,255,130	-				-1.8
3,255,156	-		Echvi_2734	0.13	+2.0
3,255,189	+		Echvi_2734	0.24	+3.0