Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2719

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,230,967	+		Echvi_2718	0.64	+0.6
3,230,982	+		Echvi_2718	0.64	-1.7
3,231,006	+		Echvi_2718	0.65	+3.9
3,231,007	-		Echvi_2718	0.65	+1.3
3,231,007	-		Echvi_2718	0.65	+1.0
3,231,039	-		Echvi_2718	0.67	+0.6
3,231,039	-		Echvi_2718	0.67	+0.9
3,231,066	+		Echvi_2718	0.68	-1.0
3,231,067	-		Echvi_2718	0.68	+1.0
3,231,067	-		Echvi_2718	0.68	+2.2
3,231,070	+		Echvi_2718	0.68	+1.3
3,231,071	-		Echvi_2718	0.68	+1.6
3,231,093	+		Echvi_2718	0.69	+0.6
3,231,093	+		Echvi_2718	0.69	+0.6
3,231,093	+		Echvi_2718	0.69	-2.6
3,231,094	-		Echvi_2718	0.69	-1.3
3,231,094	-		Echvi_2718	0.69	-2.4
3,231,122	+		Echvi_2718	0.70	+1.4
3,231,169	-		Echvi_2718	0.72	-2.2
3,231,169	-		Echvi_2718	0.72	-1.7
3,231,216	+		Echvi_2718	0.75	-2.5
3,231,289	-		Echvi_2718	0.78	-0.6
3,231,329	-		Echvi_2718	0.80	-1.7
3,231,340	-		Echvi_2718	0.80	-0.2
3,231,476	-		Echvi_2718	0.86	-0.9
3,231,476	-		Echvi_2718	0.86	-3.2
3,231,486	-		Echvi_2718	0.86	+0.6
3,231,512	+		Echvi_2718	0.88	-1.8
3,231,512	+		Echvi_2718	0.88	-0.6
3,231,512	+		Echvi_2718	0.88	-0.4
3,231,570	+				+0.3
3,231,570	+				-1.6
3,231,573	-				+0.2
3,231,573	-				-1.6
3,231,618	+				-1.4
3,231,618	+				+1.1
3,231,618	+				-2.4
3,231,619	-				+0.1
3,231,688	-				-1.4
3,231,688	-				-2.3
3,231,714	+				-0.3
3,231,714	+				-3.4
3,231,715	-				+1.2
3,231,715	-				+1.1
3,231,777	-				+0.2
3,231,797	-				-2.2
3,231,797	-				-3.5
3,231,797	-				+1.5
3,231,797	-				-0.6
3,231,797	-				-0.7
3,231,800	-				+0.6
3,231,888	-				-0.4
3,231,951	+				-2.7
3,231,957	-				+1.4
3,231,996	-				+1.6
3,232,055	-				-2.4
3,232,110	+		Echvi_2719	0.11	-1.9
3,232,169	+		Echvi_2719	0.14	-1.6
3,232,172	+		Echvi_2719	0.14	+0.3
3,232,173	-		Echvi_2719	0.14	+0.5
3,232,225	+		Echvi_2719	0.16	+1.2
3,232,269	+		Echvi_2719	0.18	-1.6
3,232,270	-		Echvi_2719	0.18	-2.1
3,232,276	+		Echvi_2719	0.19	+3.7
3,232,462	+		Echvi_2719	0.28	-1.1
3,232,676	-		Echvi_2719	0.38	+0.6
3,232,676	-		Echvi_2719	0.38	+1.0
3,232,678	+		Echvi_2719	0.38	+2.4
3,232,679	-		Echvi_2719	0.38	+2.1
3,232,679	-		Echvi_2719	0.38	-0.6
3,232,783	-		Echvi_2719	0.43	-0.4
3,232,946	-		Echvi_2719	0.51	-0.9
3,232,951	-		Echvi_2719	0.51	+0.3
3,233,185	-		Echvi_2719	0.62	+0.1
3,233,196	+		Echvi_2719	0.63	+0.2
3,233,281	+		Echvi_2719	0.67	-0.3
3,233,281	+		Echvi_2719	0.67	-0.6
3,233,427	+		Echvi_2719	0.74	-3.3
3,233,427	+		Echvi_2719	0.74	-3.8
3,233,428	-		Echvi_2719	0.74	+0.2
3,233,428	-		Echvi_2719	0.74	-1.2
3,233,428	-		Echvi_2719	0.74	-2.5
3,233,428	-		Echvi_2719	0.74	+1.7
3,233,472	+		Echvi_2719	0.76	-0.4
3,233,473	-		Echvi_2719	0.76	-1.7
3,233,527	+		Echvi_2719	0.79	-2.7
3,233,527	+		Echvi_2719	0.79	-1.7
3,233,528	-		Echvi_2719	0.79	+0.1
3,233,563	-		Echvi_2719	0.80	+1.3
3,233,571	+		Echvi_2719	0.81	-1.7
3,233,572	-		Echvi_2719	0.81	-0.4
3,233,589	-		Echvi_2719	0.82	+0.5
3,233,641	+		Echvi_2719	0.84	-3.7
3,233,642	-		Echvi_2719	0.84	-0.2
3,233,642	-		Echvi_2719	0.84	-0.4
3,233,665	-		Echvi_2719	0.85	+0.9
3,233,665	-		Echvi_2719	0.85	-2.9
3,233,748	-		Echvi_2719	0.89	+3.0
3,233,748	-		Echvi_2719	0.89	-0.9
3,233,816	+				-4.2
3,233,820	+				-2.4
3,233,820	+				-1.9
3,233,821	-				+0.4
3,233,821	-				-3.5
3,233,858	+				-1.6
3,233,939	-				-2.8
3,233,955	+				-2.8
3,233,959	+				-0.4
3,233,967	+				+0.2
3,233,967	+				+0.0
3,233,977	+				-0.3
3,233,978	-				-4.0
3,233,978	-				-0.9
3,233,982	+				-2.2
3,233,990	-				+0.7
3,234,020	+				-1.4
3,234,033	-				-3.1
3,234,033	-				-0.2
3,234,041	+				-1.2
3,234,042	-				-2.5
3,234,081	+				-1.3
3,234,081	+				+3.3
3,234,081	+				-2.2
3,234,093	+				-2.5
3,234,104	+				-0.4
3,234,127	+				-0.9
3,234,154	+				-0.2
3,234,200	-				-0.8
3,234,215	+				-2.4
3,234,216	-				-1.4
3,234,216	-				+0.7
3,234,216	-				+1.9
3,234,241	+				-0.6
3,234,241	+				+0.2
3,234,242	-				+1.3
3,234,244	+				-1.2
3,234,245	-				-1.6
3,234,259	+				+0.8
3,234,268	-				-0.4
3,234,321	+				-2.5
3,234,323	+				+0.4
3,234,323	+				-3.0
3,234,540	+				+2.1
3,234,610	+				+2.3
3,234,610	+				-0.8
3,234,610	+				+1.0
3,234,615	+				+0.4
3,234,649	-				+1.4
3,234,652	-				-0.4
3,234,717	+		Echvi_2720	0.18	-0.7
3,234,717	+		Echvi_2720	0.18	+1.6
3,234,717	+		Echvi_2720	0.18	-2.1
3,234,718	-		Echvi_2720	0.19	-1.7
3,234,751	+		Echvi_2720	0.43	+0.2
3,234,752	-		Echvi_2720	0.43	+0.5
3,234,752	-		Echvi_2720	0.43	+1.8
3,234,755	-		Echvi_2720	0.46	+0.2
3,234,758	-		Echvi_2720	0.48	+0.8
3,234,781	-		Echvi_2720	0.64	+0.8
3,234,797	+		Echvi_2720	0.76	-0.2
3,234,798	-		Echvi_2720	0.77	-1.9
3,234,798	-		Echvi_2720	0.77	-1.5
3,234,798	-		Echvi_2720	0.77	+0.6
3,234,811	+		Echvi_2720	0.86	+1.2
3,234,815	+		Echvi_2720	0.89	+0.5
3,234,830	+				-3.5
3,234,830	+				+1.2
3,234,831	-				+0.6
3,234,831	-				+1.9
3,234,831	-				-0.8
3,234,831	-				-0.4
3,234,831	-				-1.8
3,234,831	-				+0.3
3,234,834	+				-1.5
3,234,834	+				+1.2
3,234,835	-				+1.8
3,234,835	-				-1.0
3,234,837	+				+2.2
3,234,845	-				+1.2
3,234,856	-				+1.4
3,234,865	-				+1.6