Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2679

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,184,798	-		Echvi_2678	0.25	-0.1
3,184,798	-		Echvi_2678	0.25	-1.3
3,184,812	+		Echvi_2678	0.26	+1.0
3,184,813	-		Echvi_2678	0.26	-0.8
3,184,834	+		Echvi_2678	0.28	-2.5
3,184,834	+		Echvi_2678	0.28	+1.8
3,184,835	-		Echvi_2678	0.28	-0.8
3,184,958	-		Echvi_2678	0.39	-0.5
3,184,980	+		Echvi_2678	0.41	+0.2
3,184,980	+		Echvi_2678	0.41	+2.4
3,184,981	-		Echvi_2678	0.41	-0.5
3,184,990	-		Echvi_2678	0.42	+1.4
3,184,996	-		Echvi_2678	0.42	+3.6
3,185,016	+		Echvi_2678	0.44	+1.2
3,185,017	-		Echvi_2678	0.44	-0.6
3,185,037	+		Echvi_2678	0.46	-1.0
3,185,087	+		Echvi_2678	0.50	+1.2
3,185,088	-		Echvi_2678	0.50	-1.0
3,185,089	+		Echvi_2678	0.50	+0.7
3,185,090	-		Echvi_2678	0.50	+0.6
3,185,110	+		Echvi_2678	0.52	-1.1
3,185,110	+		Echvi_2678	0.52	+0.6
3,185,111	-		Echvi_2678	0.52	+0.5
3,185,111	-		Echvi_2678	0.52	+1.1
3,185,111	-		Echvi_2678	0.52	+1.1
3,185,113	+		Echvi_2678	0.52	+1.2
3,185,113	+		Echvi_2678	0.52	+1.9
3,185,113	+		Echvi_2678	0.52	-1.8
3,185,113	+		Echvi_2678	0.52	+2.4
3,185,113	+		Echvi_2678	0.52	+0.4
3,185,113	+		Echvi_2678	0.52	+0.9
3,185,114	-		Echvi_2678	0.52	+1.8
3,185,114	-		Echvi_2678	0.52	+0.8
3,185,114	-		Echvi_2678	0.52	-2.6
3,185,114	-		Echvi_2678	0.52	-0.6
3,185,114	-		Echvi_2678	0.52	-0.1
3,185,114	-		Echvi_2678	0.52	-1.1
3,185,114	-		Echvi_2678	0.52	+0.9
3,185,114	-		Echvi_2678	0.52	+0.8
3,185,114	-		Echvi_2678	0.52	-1.7
3,185,114	-		Echvi_2678	0.52	-2.4
3,185,114	-		Echvi_2678	0.52	-2.1
3,185,114	-		Echvi_2678	0.52	+0.6
3,185,115	+		Echvi_2678	0.52	+1.7
3,185,115	+		Echvi_2678	0.52	+0.9
3,185,115	+		Echvi_2678	0.52	+2.9
3,185,115	+		Echvi_2678	0.52	-1.6
3,185,116	-		Echvi_2678	0.52	+1.9
3,185,116	-		Echvi_2678	0.52	-2.5
3,185,116	-		Echvi_2678	0.52	+3.2
3,185,116	-		Echvi_2678	0.52	+1.0
3,185,116	-		Echvi_2678	0.52	+1.5
3,185,116	-		Echvi_2678	0.52	+0.3
3,185,119	+		Echvi_2678	0.53	+0.8
3,185,120	-		Echvi_2678	0.53	-1.5
3,185,120	-		Echvi_2678	0.53	-4.0
3,185,187	+		Echvi_2678	0.59	-1.6
3,185,319	+		Echvi_2678	0.70	+1.1
3,185,319	+		Echvi_2678	0.70	+1.6
3,185,320	-		Echvi_2678	0.70	+0.2
3,185,320	-		Echvi_2678	0.70	-2.5
3,185,370	+		Echvi_2678	0.74	+1.8
3,185,370	+		Echvi_2678	0.74	+0.2
3,185,371	-		Echvi_2678	0.74	+1.8
3,185,398	+		Echvi_2678	0.77	+1.5
3,185,419	-		Echvi_2678	0.79	+0.1
3,185,464	+		Echvi_2678	0.82	-0.9
3,185,465	-		Echvi_2678	0.83	+1.3
3,185,540	-		Echvi_2678	0.89	-0.1
3,185,549	-		Echvi_2678	0.90	-3.5
3,185,583	-				-0.2
3,185,592	-				-1.0
3,185,592	-				+2.8
3,185,630	+				+2.6
3,185,637	+				-1.5
3,185,637	+				+2.0
3,185,637	+				+0.1
3,185,638	-				+2.1
3,185,638	-				-0.8
3,185,638	-				+0.4
3,185,638	-				+0.4
3,185,639	+				+1.9
3,185,639	+				+2.6
3,185,639	+				-0.1
3,185,639	+				+2.3
3,185,639	+				+0.6
3,185,639	+				+1.3
3,185,639	+				+1.8
3,185,640	-				+0.0
3,185,640	-				+0.9
3,185,640	-				-1.6
3,185,640	-				+1.7
3,185,640	-				+3.8
3,185,641	+				-1.5
3,185,641	+				+2.1
3,185,669	+				-2.6
3,185,777	+				-2.0
3,185,777	+				+0.1
3,185,831	-		Echvi_2679	0.50	-1.7
3,185,831	-		Echvi_2679	0.50	-1.9
3,185,897	+				+3.1
3,185,898	-				-1.4
3,185,898	-				-2.6
3,185,898	-				-0.0
3,185,941	-				-1.0
3,185,941	-				+1.4
3,185,974	-				-2.1
3,185,977	+				+1.3
3,185,981	-				-2.6
3,186,007	-				+1.1
3,186,037	-				-2.2
3,186,041	-				+3.3
3,186,065	+				-0.1
3,186,069	-				+1.2
3,186,112	-				-2.1
3,186,115	+				+0.5
3,186,167	+				-1.0
3,186,170	+				-4.3
3,186,171	-				+0.5
3,186,171	-				+0.2
3,186,176	-		Echvi_2680	0.13	+0.5
3,186,176	-		Echvi_2680	0.13	-1.6
3,186,176	-		Echvi_2680	0.13	+1.3
3,186,203	-		Echvi_2680	0.29	+3.8
3,186,291	-		Echvi_2680	0.82	+1.7
3,186,345	+				-3.3
3,186,368	+				+0.6
3,186,396	-				-0.0
3,186,396	-				+1.5
3,186,429	-				+1.3
3,186,431	-				+1.5
3,186,441	+				-2.3
3,186,446	-				+1.7
3,186,455	+				+0.4
3,186,455	+				-1.0
3,186,580	+				-0.8
3,186,581	-				-0.9
3,186,595	+				-2.0
3,186,595	+				-1.6
3,186,598	-				+0.6
3,186,694	+				-0.5
3,186,734	-		Echvi_2681	0.10	+2.0
3,186,734	-		Echvi_2681	0.10	-2.1
3,186,736	-		Echvi_2681	0.10	+1.2
3,186,739	+		Echvi_2681	0.10	+0.5
3,186,739	+		Echvi_2681	0.10	-0.4
3,186,739	+		Echvi_2681	0.10	+2.0
3,186,739	+		Echvi_2681	0.10	-1.2
3,186,740	-		Echvi_2681	0.10	+1.1