Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2649

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
3,135,124	+				+1.1
3,135,199	+				+0.7
3,135,300	+		Echvi_2647	0.26	-1.7
3,135,339	+		Echvi_2647	0.40	-0.5
3,135,344	+		Echvi_2647	0.42	-4.3
3,135,344	+		Echvi_2647	0.42	-1.9
3,135,344	+		Echvi_2647	0.42	-1.9
3,135,345	-		Echvi_2647	0.42	+1.9
3,135,345	-		Echvi_2647	0.42	+0.6
3,135,375	+		Echvi_2647	0.53	-0.5
3,135,406	+		Echvi_2647	0.65	-1.1
3,135,463	-		Echvi_2647	0.86	-1.9
3,135,463	-		Echvi_2647	0.86	-0.3
3,135,476	-				+1.3
3,135,485	-				+1.2
3,135,507	-				+2.2
3,135,510	-				-0.4
3,135,525	+				+1.0
3,135,577	+		Echvi_2648	0.16	-1.3
3,135,586	+		Echvi_2648	0.19	+0.7
3,135,621	+		Echvi_2648	0.27	+0.4
3,135,621	+		Echvi_2648	0.27	+1.7
3,135,622	-		Echvi_2648	0.27	+1.2
3,135,655	-		Echvi_2648	0.35	+1.7
3,135,673	-		Echvi_2648	0.39	-1.1
3,135,686	-		Echvi_2648	0.42	-2.7
3,135,717	+		Echvi_2648	0.50	+0.6
3,135,717	+		Echvi_2648	0.50	+3.2
3,135,717	+		Echvi_2648	0.50	+0.6
3,135,727	+		Echvi_2648	0.52	-2.5
3,135,727	+		Echvi_2648	0.52	-1.8
3,135,746	+		Echvi_2648	0.57	-2.1
3,135,757	+		Echvi_2648	0.59	+1.1
3,135,830	+		Echvi_2648	0.77	-1.0
3,135,846	+		Echvi_2648	0.80	+0.6
3,135,846	+		Echvi_2648	0.80	-1.7
3,135,846	+		Echvi_2648	0.80	-2.1
3,135,847	-		Echvi_2648	0.81	-1.1
3,135,847	-		Echvi_2648	0.81	-2.0
3,135,850	+		Echvi_2648	0.81	+1.8
3,135,850	+		Echvi_2648	0.81	+1.8
3,135,850	+		Echvi_2648	0.81	+0.3
3,135,855	+		Echvi_2648	0.83	-2.8
3,135,856	-		Echvi_2648	0.83	+2.0
3,135,863	-		Echvi_2648	0.85	+0.4
3,135,866	+		Echvi_2648	0.85	-2.0
3,135,867	-		Echvi_2648	0.85	-1.8
3,135,867	-		Echvi_2648	0.85	+0.4
3,135,970	+				-1.9
3,135,971	-				-0.6
3,135,976	-				+0.2
3,135,982	+				-1.7
3,135,983	-				-1.1
3,135,983	-				-1.5
3,135,989	+				-0.2
3,135,990	-				-0.0
3,136,000	-				-1.1
3,136,000	-				+1.3
3,136,000	-				-0.4
3,136,000	-				+0.6
3,136,021	-				-0.0
3,136,027	-				+2.6
3,136,044	-				-2.4
3,136,050	-				-3.5
3,136,067	-				-2.0
3,136,118	+				-3.0
3,136,130	+				-0.6
3,136,130	+				-1.8
3,136,130	+				-1.6
3,136,131	-				-0.6
3,136,199	-		Echvi_2649	0.20	+0.7
3,136,208	+		Echvi_2649	0.22	-0.1
3,136,254	+		Echvi_2649	0.33	+0.6
3,136,264	-		Echvi_2649	0.36	+0.5
3,136,336	+		Echvi_2649	0.53	-1.5
3,136,337	-		Echvi_2649	0.53	+0.9
3,136,337	-		Echvi_2649	0.53	+0.8
3,136,337	-		Echvi_2649	0.53	+1.2
3,136,337	-		Echvi_2649	0.53	-2.5
3,136,341	-		Echvi_2649	0.54	+1.3
3,136,341	-		Echvi_2649	0.54	-1.5
3,136,346	+		Echvi_2649	0.56	+0.5
3,136,347	-		Echvi_2649	0.56	-2.5
3,136,365	-		Echvi_2649	0.60	-2.2
3,136,365	-		Echvi_2649	0.60	+0.2
3,136,366	+		Echvi_2649	0.61	+1.3
3,136,367	-		Echvi_2649	0.61	-2.5
3,136,367	-		Echvi_2649	0.61	-0.4
3,136,403	+		Echvi_2649	0.70	-0.9
3,136,423	+		Echvi_2649	0.75	-0.5
3,136,424	-		Echvi_2649	0.75	-1.8
3,136,444	+		Echvi_2649	0.80	+0.2
3,136,454	+		Echvi_2649	0.82	+1.3
3,136,454	+		Echvi_2649	0.82	-1.1
3,136,463	+		Echvi_2649	0.84	-0.6
3,136,487	-				-0.3
3,136,498	+				-3.0
3,136,511	-				-1.1
3,136,513	+				-0.3
3,136,513	+				+0.8
3,136,561	-		Echvi_2650	0.12	+1.8
3,136,561	-		Echvi_2650	0.12	+0.1
3,136,612	+		Echvi_2650	0.27	+0.5
3,136,629	-		Echvi_2650	0.32	+0.4
3,136,645	+		Echvi_2650	0.37	-1.7
3,136,646	-		Echvi_2650	0.38	+1.0
3,136,690	+		Echvi_2650	0.51	-0.1
3,136,692	+		Echvi_2650	0.52	+1.3
3,136,693	-		Echvi_2650	0.52	+0.4
3,136,702	+		Echvi_2650	0.55	+0.8
3,136,702	+		Echvi_2650	0.55	+1.9
3,136,703	-		Echvi_2650	0.55	-0.6
3,136,712	+		Echvi_2650	0.58	-2.7
3,136,715	-		Echvi_2650	0.59	-1.6
3,136,723	+		Echvi_2650	0.61	+0.1
3,136,729	+		Echvi_2650	0.63	-1.4
3,136,729	+		Echvi_2650	0.63	-0.1
3,136,742	+		Echvi_2650	0.67	+0.5
3,136,753	+		Echvi_2650	0.70	-1.1
3,136,753	+		Echvi_2650	0.70	+1.2
3,136,753	+		Echvi_2650	0.70	+0.3
3,136,754	-		Echvi_2650	0.71	-2.9
3,136,754	-		Echvi_2650	0.71	-2.7
3,136,754	-		Echvi_2650	0.71	-0.9
3,136,754	-		Echvi_2650	0.71	-1.9
3,136,756	+		Echvi_2650	0.71	-0.8
3,136,771	-		Echvi_2650	0.76	+0.2
3,136,793	+		Echvi_2650	0.83	+1.1
3,136,793	+		Echvi_2650	0.83	+1.2
3,136,794	-		Echvi_2650	0.83	+2.2
3,136,796	-		Echvi_2650	0.83	-2.3
3,136,839	+				-1.8
3,136,840	-				+1.2
3,136,840	-				+0.8
3,136,855	+				-1.0
3,136,861	-				+1.9
3,136,878	+				+0.9
3,136,881	+				-1.6
3,136,894	+				-1.2
3,136,894	+				+5.4
3,136,898	+				-3.0
3,136,940	+				-0.0
3,136,940	+				-1.5
3,136,940	+				-0.1
3,136,940	+				-3.2
3,136,941	-				-1.6
3,136,941	-				+0.6
3,136,975	+				-2.0
3,136,987	+				-0.1
3,136,988	-				-0.1
3,137,010	-				+0.3
3,137,010	-				+0.9
3,137,010	-				-2.3
3,137,010	-				-1.0
3,137,063	-				+1.7
3,137,108	+				+2.0
3,137,108	+				+0.6
3,137,150	+				-1.7
3,137,150	+				+2.7
3,137,151	-				+1.3
3,137,151	-				+1.5
3,137,185	+				-2.9
3,137,185	+				-1.6
3,137,190	+				-1.7
3,137,191	-				-1.7
3,137,191	-				+0.8
3,137,196	+				-2.7
3,137,259	-				+3.9
3,137,316	-				-2.5
3,137,316	-				-2.0
3,137,405	+				-0.5
3,137,405	+				+0.9
3,137,423	+				+1.2
3,137,458	+				+0.6
3,137,470	-				-0.6
3,137,481	+				-1.1
3,137,501	+				+1.4
3,137,501	+				-1.0
3,137,501	+				-0.8
3,137,502	-				-2.2
3,137,502	-				+1.5
3,137,502	-				-0.3
3,137,502	-				-1.5
3,137,502	-				+0.1
3,137,502	-				-2.0
3,137,502	-				-1.2
3,137,502	-				-1.5