Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2518

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,988,407	+				-1.5
2,988,407	+				-1.8
2,988,408	-				-2.1
2,988,445	+				-0.4
2,988,445	+				+0.7
2,988,445	+				-1.0
2,988,450	-				-3.1
2,988,483	-				+2.9
2,988,497	+				+0.7
2,988,560	-		Echvi_2517	0.16	+0.8
2,988,561	+		Echvi_2517	0.16	-1.6
2,988,607	-		Echvi_2517	0.23	+0.5
2,988,689	+		Echvi_2517	0.37	-0.9
2,988,810	-		Echvi_2517	0.57	+0.9
2,988,819	+		Echvi_2517	0.58	+0.4
2,988,893	+		Echvi_2517	0.70	-0.4
2,988,893	+		Echvi_2517	0.70	+0.5
2,988,951	+		Echvi_2517	0.80	+2.1
2,988,952	-		Echvi_2517	0.80	+1.4
2,989,080	+				+1.3
2,989,144	+				-0.8
2,989,259	+				+3.5
2,989,260	-				+0.7
2,989,276	+				+0.4
2,989,276	+				+3.2
2,989,307	+		Echvi_2518	0.12	+1.5
2,989,331	+		Echvi_2518	0.14	-2.5
2,989,473	-		Echvi_2518	0.24	+0.2
2,989,473	-		Echvi_2518	0.24	+0.5
2,989,503	+		Echvi_2518	0.27	+0.4
2,989,503	+		Echvi_2518	0.27	-2.5
2,989,504	-		Echvi_2518	0.27	+1.0
2,989,504	-		Echvi_2518	0.27	-0.1
2,989,504	-		Echvi_2518	0.27	+1.6
2,989,504	-		Echvi_2518	0.27	-0.4
2,989,504	-		Echvi_2518	0.27	+1.7
2,989,505	+		Echvi_2518	0.27	+2.6
2,989,505	+		Echvi_2518	0.27	-1.6
2,989,505	+		Echvi_2518	0.27	+2.0
2,989,506	-		Echvi_2518	0.27	+0.4
2,989,506	-		Echvi_2518	0.27	+0.2
2,989,528	-		Echvi_2518	0.28	-0.4
2,989,528	-		Echvi_2518	0.28	-0.5
2,989,587	+		Echvi_2518	0.33	+1.2
2,989,588	-		Echvi_2518	0.33	-2.6
2,989,588	-		Echvi_2518	0.33	-0.9
2,989,618	-		Echvi_2518	0.35	-3.3
2,989,653	+		Echvi_2518	0.38	-0.0
2,989,655	+		Echvi_2518	0.38	+0.4
2,989,656	-		Echvi_2518	0.38	-0.8
2,989,656	-		Echvi_2518	0.38	+1.2
2,989,767	+		Echvi_2518	0.46	+2.8
2,989,768	-		Echvi_2518	0.47	-0.5
2,989,785	+		Echvi_2518	0.48	-0.1
2,989,786	-		Echvi_2518	0.48	+0.8
2,989,850	+		Echvi_2518	0.53	-2.5
2,989,850	+		Echvi_2518	0.53	-0.1
2,989,851	-		Echvi_2518	0.53	-1.0
2,989,851	-		Echvi_2518	0.53	+0.2
2,989,930	+		Echvi_2518	0.59	-1.8
2,990,130	+		Echvi_2518	0.74	+0.4
2,990,135	+		Echvi_2518	0.74	+2.2
2,990,193	+		Echvi_2518	0.78	-1.5
2,990,228	+		Echvi_2518	0.81	-1.6
2,990,229	-		Echvi_2518	0.81	-2.3
2,990,319	+		Echvi_2518	0.88	-1.1
2,990,319	+		Echvi_2518	0.88	-2.1
2,990,320	-		Echvi_2518	0.88	-2.8
2,990,333	+		Echvi_2518	0.89	-0.6
2,990,334	-		Echvi_2518	0.89	-2.3
2,990,354	+				-2.7
2,990,354	+				+0.3
2,990,354	+				+1.8
2,990,354	+				-2.3
2,990,355	-				+0.2
2,990,356	+				+2.0
2,990,356	+				-2.1
2,990,356	+				+1.5
2,990,430	+				-1.5
2,990,439	+				-1.3
2,990,442	+				+1.3
2,990,442	+				+0.7
2,990,452	-				-1.4
2,990,452	-				-0.6
2,990,488	-				+2.6
2,990,499	+				-0.6
2,990,500	-				-2.0
2,990,500	-				+1.6
2,990,502	-				+0.9
2,990,518	+				-0.2
2,990,519	-				+2.4
2,990,567	-				-1.3
2,990,610	+				+1.5
2,990,610	+				+4.9
2,990,610	+				+0.1
2,990,611	-				-1.4
2,990,611	-				-3.5
2,990,611	-				+0.2
2,990,611	-				-1.3
2,990,611	-				+1.5
2,990,611	-				-2.1
2,990,611	-				+1.5
2,990,611	-				-1.6
2,990,611	-				+1.0
2,990,615	-				+0.2
2,990,620	+				+1.0
2,990,621	-				+0.6
2,990,634	+				-2.1
2,990,634	+				+1.5
2,990,687	+				-2.2
2,990,806	-		Echvi_2519	0.26	+1.7
2,990,835	+		Echvi_2519	0.30	+3.0
2,990,835	+		Echvi_2519	0.30	-2.6
2,990,835	+		Echvi_2519	0.30	+1.6
2,990,836	-		Echvi_2519	0.30	-0.8
2,990,836	-		Echvi_2519	0.30	-2.6
2,990,879	-		Echvi_2519	0.37	-0.8
2,990,883	+		Echvi_2519	0.37	+0.6
2,990,883	+		Echvi_2519	0.37	+1.2
2,990,883	+		Echvi_2519	0.37	-1.8
2,990,884	-		Echvi_2519	0.37	-1.5
2,990,949	+		Echvi_2519	0.47	+2.3
2,990,949	+		Echvi_2519	0.47	-1.1
2,990,950	-		Echvi_2519	0.47	+1.7
2,990,971	+		Echvi_2519	0.50	-0.1
2,991,045	+		Echvi_2519	0.62	+0.7
2,991,100	+		Echvi_2519	0.70	+0.2
2,991,104	+		Echvi_2519	0.70	+2.2
2,991,104	+		Echvi_2519	0.70	+0.3
2,991,105	-		Echvi_2519	0.71	+1.0
2,991,105	-		Echvi_2519	0.71	+0.7
2,991,105	-		Echvi_2519	0.71	-2.6
2,991,112	-		Echvi_2519	0.72	+2.6
2,991,112	-		Echvi_2519	0.72	+1.6
2,991,115	+		Echvi_2519	0.72	-1.9
2,991,415	+				-4.4
2,991,416	-				+1.3