Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2504

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,975,588	+				-1.0
2,975,592	+				-0.6
2,975,624	+		Echvi_2502	0.16	+1.8
2,975,659	+		Echvi_2502	0.27	-1.0
2,975,659	+		Echvi_2502	0.27	-1.0
2,975,659	+		Echvi_2502	0.27	-0.4
2,975,666	+		Echvi_2502	0.29	-1.4
2,975,666	+		Echvi_2502	0.29	-0.7
2,975,771	-		Echvi_2502	0.63	-2.1
2,975,771	-		Echvi_2502	0.63	+0.5
2,975,774	+		Echvi_2502	0.64	-0.8
2,975,775	-		Echvi_2502	0.65	-0.1
2,975,881	+				-2.6
2,975,882	-				-0.1
2,975,882	-				-0.5
2,975,882	-				+0.4
2,975,921	-				+0.1
2,975,921	-				-0.3
2,975,935	-		Echvi_2503	0.15	-2.6
2,975,977	+		Echvi_2503	0.33	+4.0
2,976,072	+		Echvi_2503	0.75	-0.6
2,976,073	-		Echvi_2503	0.75	-1.4
2,976,085	+		Echvi_2503	0.81	+3.0
2,976,086	-		Echvi_2503	0.81	-2.1
2,976,109	+				-1.4
2,976,136	+				+0.6
2,976,286	-				-1.0
2,976,286	-				-3.7
2,976,344	+				-2.3
2,976,345	-				+1.4
2,976,375	+				+0.7
2,976,499	+				-2.7
2,976,501	+				-1.5
2,976,501	+				+1.5
2,976,501	+				+1.3
2,976,501	+				-0.2
2,976,631	+				+0.9
2,976,631	+				-1.0
2,976,710	+		Echvi_2504	0.11	+0.2
2,976,917	+		Echvi_2504	0.26	+0.2
2,976,946	+		Echvi_2504	0.28	-1.0
2,976,958	+		Echvi_2504	0.28	+0.9
2,977,286	+		Echvi_2504	0.52	-0.8
2,978,080	+		Echvi_2505	0.20	-2.1
2,978,162	-		Echvi_2505	0.41	-0.1
2,978,162	-		Echvi_2505	0.41	-0.4
2,978,178	+		Echvi_2505	0.46	-2.6
2,978,199	-		Echvi_2505	0.51	-1.6
2,978,210	+		Echvi_2505	0.54	-4.1
2,978,215	-		Echvi_2505	0.55	-1.6
2,978,261	-		Echvi_2505	0.67	-1.5
2,978,293	-		Echvi_2505	0.76	-1.3
2,978,453	+				-0.4
2,978,454	-				+0.6
2,978,455	+				-1.6
2,978,466	+				-0.4
2,978,472	+				-3.0
2,978,512	+				-1.8
2,978,666	+		Echvi_2506	0.36	-0.1
2,978,843	+		Echvi_2506	0.67	+0.6
2,978,892	+		Echvi_2506	0.76	+0.5
2,978,920	+		Echvi_2506	0.81	-0.3
2,978,943	-		Echvi_2506	0.85	-0.6