Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2492

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,960,998	+		Echvi_2491	0.62	+3.2
2,960,999	-		Echvi_2491	0.62	+1.7
2,961,062	+		Echvi_2491	0.65	-1.0
2,961,143	-		Echvi_2491	0.68	+0.6
2,961,196	+		Echvi_2491	0.71	-0.1
2,961,196	+		Echvi_2491	0.71	+0.2
2,961,197	-		Echvi_2491	0.71	-0.6
2,961,241	-		Echvi_2491	0.73	-0.5
2,961,252	+		Echvi_2491	0.73	-1.1
2,961,253	-		Echvi_2491	0.73	+1.0
2,961,325	+		Echvi_2491	0.76	+0.2
2,961,326	-		Echvi_2491	0.76	+0.3
2,961,477	-		Echvi_2491	0.83	+0.1
2,961,585	+		Echvi_2491	0.88	-1.7
2,961,586	-		Echvi_2491	0.88	-0.4
2,961,586	-		Echvi_2491	0.88	-0.8
2,961,586	-		Echvi_2491	0.88	-3.2
2,961,617	+		Echvi_2491	0.89	-3.2
2,961,617	+		Echvi_2491	0.89	-1.6
2,961,706	-				-2.9
2,961,748	-				-2.7
2,961,770	+				-1.1
2,961,771	-				-1.3
2,961,771	-				-0.6
2,961,771	-				-1.6
2,961,773	-				+1.5
2,961,773	-				-2.2
2,961,837	+				-0.4
2,961,837	+				+0.1
2,961,837	+				+0.6
2,961,838	-				+0.2
2,961,847	-				+0.3
2,961,857	+				+1.2
2,961,859	+				+1.0
2,961,971	+				+2.8
2,961,991	+				+1.4
2,961,992	-				-1.5
2,962,071	+				-0.5
2,962,071	+				-1.6
2,962,071	+				+1.3
2,962,071	+				+1.7
2,962,072	-				+3.2
2,962,107	-				+1.2
2,962,125	+				-1.3
2,962,137	-				-0.8
2,962,137	-				+1.5
2,962,173	+		Echvi_2492	0.11	-1.4
2,962,284	+		Echvi_2492	0.17	-1.4
2,962,284	+		Echvi_2492	0.17	+0.4
2,962,284	+				+1.2
2,962,284	+		Echvi_2492	0.17	-1.6
2,962,311	+		Echvi_2492	0.18	-0.6
2,962,312	-		Echvi_2492	0.18	-1.0
2,962,418	+		Echvi_2492	0.24	+0.4
2,962,520	+		Echvi_2492	0.29	-0.6
2,962,520	+		Echvi_2492	0.29	+0.9
2,962,521	-		Echvi_2492	0.29	-0.4
2,962,569	-		Echvi_2492	0.32	+0.2
2,962,616	+		Echvi_2492	0.34	-0.1
2,962,718	+		Echvi_2492	0.40	-2.5
2,962,799	+		Echvi_2492	0.44	+0.7
2,962,799	+		Echvi_2492	0.44	+3.0
2,962,962	+		Echvi_2492	0.53	-0.4
2,962,963	-		Echvi_2492	0.53	+2.8
2,962,963	-		Echvi_2492	0.53	-0.8
2,962,963	-				+1.2
2,963,017	+		Echvi_2492	0.55	-0.5
2,963,017	+		Echvi_2492	0.55	-2.5
2,963,018	-		Echvi_2492	0.56	-1.2
2,963,018	-		Echvi_2492	0.56	-1.6
2,963,073	+		Echvi_2492	0.58	-1.8
2,963,073	+		Echvi_2492	0.58	+0.8
2,963,074	-		Echvi_2492	0.58	-0.4
2,963,074	-		Echvi_2492	0.58	-1.1
2,963,254	+		Echvi_2492	0.68	+0.7
2,963,277	+		Echvi_2492	0.69	+1.1
2,963,277	+		Echvi_2492	0.69	-2.2
2,963,277	+		Echvi_2492	0.69	-1.1
2,963,278	-		Echvi_2492	0.69	+2.2
2,963,278	-		Echvi_2492	0.69	+0.3
2,963,278	-		Echvi_2492	0.69	-0.1
2,963,278	-		Echvi_2492	0.69	+1.1
2,963,320	-		Echvi_2492	0.71	-0.1
2,963,320	-		Echvi_2492	0.71	-2.8
2,963,354	-		Echvi_2492	0.73	-2.5
2,963,452	+		Echvi_2492	0.78	-2.6
2,963,453	-		Echvi_2492	0.78	-1.1
2,963,606	+		Echvi_2492	0.87	-0.1
2,963,606	+		Echvi_2492	0.87	+1.7
2,963,606	+		Echvi_2492	0.87	+1.3
2,963,608	+		Echvi_2492	0.87	+0.5
2,963,608	+		Echvi_2492	0.87	-1.8
2,963,613	+		Echvi_2492	0.87	-1.4
2,963,613	+		Echvi_2492	0.87	+0.8
2,963,613	+		Echvi_2492	0.87	-1.0
2,963,875	-				-2.7
2,963,885	-				-1.8
2,963,885	-				-1.8
2,963,886	+				-0.6
2,963,944	+				-2.7
2,963,956	+				+1.2
2,963,956	+				-2.2
2,963,961	+				+2.5
2,963,991	-				-0.6
2,964,030	+				+2.0
2,964,062	-				-1.5
2,964,062	-				-1.3
2,964,138	+				-2.0
2,964,138	+				+1.3
2,964,138	+				-1.7
2,964,138	+				+2.2
2,964,139	-				-2.4
2,964,139	-				-2.9
2,964,140	+				-2.4
2,964,141	-				+0.1
2,964,143	+				-1.8
2,964,148	+				-0.6
2,964,335	+		Echvi_2493	0.17	-0.1
2,964,351	+		Echvi_2493	0.18	-1.8
2,964,356	-		Echvi_2493	0.19	-1.1
2,964,356	-		Echvi_2493	0.19	-1.0
2,964,356	-		Echvi_2493	0.19	+4.3
2,964,390	+		Echvi_2493	0.22	-0.1
2,964,391	-		Echvi_2493	0.22	-2.1
2,964,461	+		Echvi_2493	0.28	-0.6
2,964,461	+		Echvi_2493	0.28	-3.3
2,964,485	+		Echvi_2493	0.31	-0.4
2,964,486	-		Echvi_2493	0.31	-0.8
2,964,486	-		Echvi_2493	0.31	+2.9
2,964,651	+		Echvi_2493	0.46	-0.5
2,964,697	+		Echvi_2493	0.50	-1.9
2,964,697	+		Echvi_2493	0.50	-1.0
2,964,698	-		Echvi_2493	0.50	+2.9
2,964,734	+		Echvi_2493	0.53	-0.7
2,964,802	+		Echvi_2493	0.60	+0.7
2,964,803	-		Echvi_2493	0.60	-1.0