Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2491

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,958,677	+				-2.7
2,958,677	+				-3.5
2,958,678	-				-2.4
2,958,678	-				-1.3
2,958,678	-				+0.4
2,958,753	+				-2.7
2,958,757	+				+0.0
2,958,758	-				-2.1
2,958,841	+		Echvi_2490	0.11	-1.6
2,958,843	+		Echvi_2490	0.11	-0.1
2,958,843	+		Echvi_2490	0.11	-2.7
2,958,843	+		Echvi_2490	0.11	-3.4
2,958,958	-		Echvi_2490	0.26	+0.3
2,959,077	+		Echvi_2490	0.40	+0.3
2,959,230	+		Echvi_2490	0.59	+0.2
2,959,231	-		Echvi_2490	0.59	+1.7
2,959,262	+		Echvi_2490	0.63	+2.4
2,959,262	+		Echvi_2490	0.63	-0.8
2,959,262	+		Echvi_2490	0.63	-2.6
2,959,262	+		Echvi_2490	0.63	-0.8
2,959,294	+		Echvi_2490	0.67	-3.1
2,959,295	-		Echvi_2490	0.67	-0.2
2,959,412	+		Echvi_2490	0.82	+0.8
2,959,413	-		Echvi_2490	0.82	+0.4
2,959,422	+		Echvi_2490	0.83	+1.7
2,959,422	+		Echvi_2490	0.83	+1.8
2,959,423	-		Echvi_2490	0.83	-0.1
2,959,514	+				-3.2
2,959,516	+				-0.8
2,959,517	-				-1.1
2,959,517	-				+0.2
2,959,517	-				+1.5
2,959,517	-				-2.5
2,959,520	+				+0.0
2,959,520	+				-0.3
2,959,520	+				-3.9
2,959,520	+				-0.0
2,959,520	+				-2.0
2,959,520	+				-1.1
2,959,543	+				-1.9
2,959,543	+				+0.0
2,959,599	+				-0.4
2,959,599	+				+3.1
2,959,599	+				-1.1
2,959,599	+				-2.1
2,959,599	+				+4.4
2,959,600	-				-2.2
2,959,600	-				-1.6
2,959,600	-				-0.1
2,959,600	-				-1.1
2,959,861	+		Echvi_2491	0.13	-1.6
2,959,927	+		Echvi_2491	0.16	-1.7
2,959,927	+		Echvi_2491	0.16	-2.5
2,959,928	-		Echvi_2491	0.16	+2.1
2,959,940	-		Echvi_2491	0.16	+0.5
2,960,036	+		Echvi_2491	0.20	-1.9
2,960,044	+		Echvi_2491	0.21	+1.7
2,960,044	+		Echvi_2491	0.21	-0.3
2,960,044	+		Echvi_2491	0.21	-1.7
2,960,045	-		Echvi_2491	0.21	+0.2
2,960,045	-		Echvi_2491	0.21	+1.5
2,960,047	+		Echvi_2491	0.21	-0.6
2,960,164	-		Echvi_2491	0.26	-0.4
2,960,268	+		Echvi_2491	0.30	+0.4
2,960,309	+		Echvi_2491	0.32	+0.6
2,960,356	-		Echvi_2491	0.34	-0.8
2,960,511	+		Echvi_2491	0.41	-1.3
2,960,511	+		Echvi_2491	0.41	+1.1
2,960,739	+		Echvi_2491	0.51	-2.0
2,960,739	+		Echvi_2491	0.51	-0.1
2,960,998	+		Echvi_2491	0.62	+3.2
2,960,999	-		Echvi_2491	0.62	+1.7
2,961,062	+		Echvi_2491	0.65	-1.0
2,961,143	-		Echvi_2491	0.68	+0.6
2,961,196	+		Echvi_2491	0.71	-0.1
2,961,196	+		Echvi_2491	0.71	+0.2
2,961,197	-		Echvi_2491	0.71	-0.6
2,961,241	-		Echvi_2491	0.73	-0.5
2,961,252	+		Echvi_2491	0.73	-1.1
2,961,253	-		Echvi_2491	0.73	+1.0
2,961,325	+		Echvi_2491	0.76	+0.2
2,961,326	-		Echvi_2491	0.76	+0.3
2,961,477	-		Echvi_2491	0.83	+0.1
2,961,585	+		Echvi_2491	0.88	-1.7
2,961,586	-		Echvi_2491	0.88	-0.4
2,961,586	-		Echvi_2491	0.88	-0.8
2,961,586	-		Echvi_2491	0.88	-3.2
2,961,617	+		Echvi_2491	0.89	-3.2
2,961,617	+		Echvi_2491	0.89	-1.6
2,961,706	-				-2.9
2,961,748	-				-2.7
2,961,770	+				-1.1
2,961,771	-				-1.3
2,961,771	-				-0.6
2,961,771	-				-1.6
2,961,773	-				+1.5
2,961,773	-				-2.2
2,961,837	+				-0.4
2,961,837	+				+0.1
2,961,837	+				+0.6
2,961,838	-				+0.2
2,961,847	-				+0.3
2,961,857	+				+1.2
2,961,859	+				+1.0
2,961,971	+				+2.8
2,961,991	+				+1.4
2,961,992	-				-1.5
2,962,071	+				-0.5
2,962,071	+				-1.6
2,962,071	+				+1.3
2,962,071	+				+1.7
2,962,072	-				+3.2
2,962,107	-				+1.2
2,962,125	+				-1.3
2,962,137	-				-0.8
2,962,137	-				+1.5
2,962,173	+		Echvi_2492	0.11	-1.4
2,962,284	+		Echvi_2492	0.17	-1.4
2,962,284	+		Echvi_2492	0.17	+0.4
2,962,284	+				+1.2
2,962,284	+		Echvi_2492	0.17	-1.6
2,962,311	+		Echvi_2492	0.18	-0.6
2,962,312	-		Echvi_2492	0.18	-1.0
2,962,418	+		Echvi_2492	0.24	+0.4
2,962,520	+		Echvi_2492	0.29	-0.6
2,962,520	+		Echvi_2492	0.29	+0.9
2,962,521	-		Echvi_2492	0.29	-0.4
2,962,569	-		Echvi_2492	0.32	+0.2
2,962,616	+		Echvi_2492	0.34	-0.1
2,962,718	+		Echvi_2492	0.40	-2.5
2,962,799	+		Echvi_2492	0.44	+0.7
2,962,799	+		Echvi_2492	0.44	+3.0