Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2484

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,948,900	-				-3.5
2,948,910	+				+0.5
2,948,911	-				-2.4
2,948,989	+		Echvi_2483	0.11	-2.4
2,948,990	-		Echvi_2483	0.11	+1.2
2,949,025	+		Echvi_2483	0.16	-2.6
2,949,047	+		Echvi_2483	0.18	-4.0
2,949,047	+		Echvi_2483	0.18	+0.6
2,949,047	+		Echvi_2483	0.18	+0.3
2,949,047	+		Echvi_2483	0.18	+0.9
2,949,048	-		Echvi_2483	0.18	-3.0
2,949,048	-		Echvi_2483	0.18	+1.1
2,949,049	+		Echvi_2483	0.18	+0.3
2,949,049	+		Echvi_2483	0.18	+2.2
2,949,049	+		Echvi_2483	0.18	+0.5
2,949,049	+		Echvi_2483	0.18	-1.0
2,949,049	+		Echvi_2483	0.18	+1.4
2,949,049	+		Echvi_2483	0.18	-1.6
2,949,049	+		Echvi_2483	0.18	-0.4
2,949,050	-		Echvi_2483	0.19	-0.7
2,949,050	-		Echvi_2483	0.19	-0.9
2,949,050	-		Echvi_2483	0.19	-1.5
2,949,050	-		Echvi_2483	0.19	+0.2
2,949,054	-		Echvi_2483	0.19	-0.0
2,949,077	-		Echvi_2483	0.22	-1.2
2,949,131	-		Echvi_2483	0.28	+1.2
2,949,170	-		Echvi_2483	0.33	-0.1
2,949,170	-		Echvi_2483	0.33	+1.6
2,949,186	-		Echvi_2483	0.35	-0.6
2,949,366	-		Echvi_2483	0.57	-1.9
2,949,383	+		Echvi_2483	0.59	+1.2
2,949,383	+		Echvi_2483	0.59	-1.5
2,949,384	-		Echvi_2483	0.59	+0.8
2,949,384	-		Echvi_2483	0.59	+1.0
2,949,384	-		Echvi_2483	0.59	-1.1
2,949,559	+		Echvi_2483	0.81	+0.8
2,949,601	-		Echvi_2483	0.86	+0.6
2,949,658	+				+1.9
2,949,659	-				-1.2
2,949,659	-				-1.0
2,949,659	-				+0.8
2,949,659	-				+1.3
2,949,662	+				+2.0
2,949,719	+				+0.6
2,949,720	-				-1.4
2,949,771	-				+0.3
2,949,812	+				-1.3
2,949,821	+				-1.7
2,949,822	-				+1.4
2,949,822	-				-1.6
2,949,867	+				-0.1
2,949,867	+				-0.6
2,949,868	-				-0.1
2,949,868	-				-2.0
2,949,926	+				+1.8
2,949,926	+				+2.0
2,949,926	+				-1.1
2,949,926	+				-1.6
2,949,926	+				+1.6
2,949,926	+				-2.4
2,949,926	+				-0.1
2,949,927	-				-1.5
2,949,927	-				+0.5
2,949,929	+				+0.6
2,950,053	+				+3.5
2,950,054	-		Echvi_2484	0.11	-1.1
2,950,257	-		Echvi_2484	0.18	-2.3
2,950,311	+		Echvi_2484	0.20	-0.1
2,950,312	-		Echvi_2484	0.20	-2.8
2,950,317	+		Echvi_2484	0.20	-0.4
2,950,505	+		Echvi_2484	0.26	-1.7
2,950,522	+		Echvi_2484	0.27	+2.6
2,950,523	-		Echvi_2484	0.27	+2.4
2,950,540	-		Echvi_2484	0.27	-1.1
2,950,541	+		Echvi_2484	0.27	+0.9
2,950,541	+		Echvi_2484	0.27	+1.2
2,950,541	+		Echvi_2484	0.27	-1.0
2,950,542	-		Echvi_2484	0.27	-1.1
2,950,542	-		Echvi_2484	0.27	+1.8
2,950,542	-		Echvi_2484	0.27	+1.4
2,950,574	+		Echvi_2484	0.29	-0.6
2,950,574	+		Echvi_2484	0.29	+3.2
2,950,574	+		Echvi_2484	0.29	+2.2
2,950,575	-		Echvi_2484	0.29	+0.6
2,950,575	-		Echvi_2484	0.29	-1.3
2,950,700	+		Echvi_2484	0.33	-1.5
2,950,701	-		Echvi_2484	0.33	+1.1
2,950,701	-		Echvi_2484	0.33	+1.1
2,950,701	-		Echvi_2484	0.33	+1.9
2,950,701	-		Echvi_2484	0.33	-1.4
2,950,716	-		Echvi_2484	0.33	-0.1
2,950,724	+		Echvi_2484	0.34	+1.1
2,950,725	-		Echvi_2484	0.34	-3.8
2,950,745	+		Echvi_2484	0.34	+0.5
2,950,745	+		Echvi_2484	0.34	-2.0
2,950,745	+		Echvi_2484	0.34	+0.1
2,950,746	-		Echvi_2484	0.34	+1.2
2,950,775	+		Echvi_2484	0.35	-3.3
2,950,914	+		Echvi_2484	0.40	-1.9
2,950,915	-		Echvi_2484	0.40	+1.6
2,950,939	+		Echvi_2484	0.41	-2.5
2,950,939	+		Echvi_2484	0.41	+1.1
2,950,939	+		Echvi_2484	0.41	-1.3
2,951,046	+		Echvi_2484	0.44	-2.0
2,951,134	+		Echvi_2484	0.47	+0.3
2,951,134	+		Echvi_2484	0.47	-0.3
2,951,349	+		Echvi_2484	0.55	-0.5
2,951,351	+		Echvi_2484	0.55	+1.6
2,951,354	+		Echvi_2484	0.55	-2.3
2,951,355	-		Echvi_2484	0.55	-2.2
2,951,371	+		Echvi_2484	0.55	+2.8
2,951,372	-		Echvi_2484	0.55	+0.8
2,951,397	+		Echvi_2484	0.56	+1.2
2,951,439	-		Echvi_2484	0.58	-2.6
2,951,466	+		Echvi_2484	0.59	-3.3
2,951,467	-		Echvi_2484	0.59	-0.7
2,951,467	-		Echvi_2484	0.59	-0.1
2,951,498	+		Echvi_2484	0.60	+0.3
2,951,498	+		Echvi_2484	0.60	+3.1
2,951,499	-		Echvi_2484	0.60	-0.0
2,951,499	-		Echvi_2484	0.60	+0.8
2,951,596	-		Echvi_2484	0.63	+2.8
2,951,622	-		Echvi_2484	0.64	+2.0
2,951,643	+		Echvi_2484	0.65	+4.9
2,951,643	+		Echvi_2484	0.65	+0.3
2,951,685	+		Echvi_2484	0.66	-3.0
2,951,695	+		Echvi_2484	0.66	-2.5
2,951,695	+		Echvi_2484	0.66	-2.7
2,951,796	+		Echvi_2484	0.70	-1.8
2,951,798	+		Echvi_2484	0.70	-0.2
2,951,798	+		Echvi_2484	0.70	+1.2
2,951,798	+		Echvi_2484	0.70	+0.1
2,951,798	+		Echvi_2484	0.70	+1.0
2,951,826	-		Echvi_2484	0.71	-3.0
2,951,949	-		Echvi_2484	0.75	+0.2
2,952,001	-		Echvi_2484	0.77	+0.8
2,952,033	-		Echvi_2484	0.78	-0.0
2,952,033	-		Echvi_2484	0.78	+0.4
2,952,067	+		Echvi_2484	0.79	+0.9
2,952,260	+		Echvi_2484	0.85	+0.2
2,952,260	+		Echvi_2484	0.85	+1.7
2,952,260	+		Echvi_2484	0.85	+0.3
2,952,261	-		Echvi_2484	0.85	-3.6
2,952,261	-		Echvi_2484	0.85	+2.8
2,952,362	+		Echvi_2484	0.89	+2.1
2,952,460	+				+2.0
2,952,460	+				+1.9
2,952,460	+				+0.6
2,952,460	+				-0.5
2,952,461	-				-0.8
2,952,465	+				+1.0
2,952,496	+				+1.2
2,952,553	+				-1.9
2,952,571	+				+1.8
2,952,571	+				+0.3
2,952,612	+				+1.6
2,952,613	-				+1.2
2,952,617	+				-0.6
2,952,617	+				+0.6
2,952,618	-				+0.4
2,952,618	-				-0.3
2,952,661	+				-0.8
2,952,744	+				+0.4
2,952,788	+				-0.1
2,952,914	-				-2.8
2,952,916	-				+5.2
2,952,938	-				-2.7
2,952,938	-				-0.8
2,952,938	-				-0.1
2,952,938	-				+0.6
2,952,968	+				-1.8
2,952,972	+				-2.3
2,952,973	-				-2.2
2,952,994	+				-1.4
2,953,061	+				+0.5
2,953,061	+				+0.8
2,953,061	+				-0.2
2,953,063	+				-1.4
2,953,064	-				+0.2
2,953,064	-				-0.7
2,953,070	+				-0.1
2,953,070	+				-1.5
2,953,155	+		Echvi_2485	0.15	+0.0
2,953,156	-		Echvi_2485	0.15	+0.3
2,953,156	-		Echvi_2485	0.15	-0.1
2,953,174	+		Echvi_2485	0.17	-0.4
2,953,174	+		Echvi_2485	0.17	+0.2
2,953,174	+		Echvi_2485	0.17	+1.9
2,953,175	-		Echvi_2485	0.17	-2.3
2,953,175	-		Echvi_2485	0.17	+0.6
2,953,206	+		Echvi_2485	0.20	-2.3
2,953,207	-		Echvi_2485	0.20	+0.2
2,953,232	+		Echvi_2485	0.22	+2.2
2,953,233	-		Echvi_2485	0.22	+1.7
2,953,278	-		Echvi_2485	0.26	+0.6
2,953,278	-		Echvi_2485	0.26	+0.0
2,953,328	+		Echvi_2485	0.31	-1.5
2,953,400	+		Echvi_2485	0.37	-2.3
2,953,400	+		Echvi_2485	0.37	+0.2
2,953,401	-		Echvi_2485	0.37	+1.7
2,953,422	+		Echvi_2485	0.39	+0.3
2,953,423	-		Echvi_2485	0.39	+0.4
2,953,423	-		Echvi_2485	0.39	-0.8
2,953,423	-		Echvi_2485	0.39	+2.5
2,953,423	-		Echvi_2485	0.39	+0.3
2,953,483	+		Echvi_2485	0.45	+0.2
2,953,484	-		Echvi_2485	0.45	-0.0
2,953,484	-		Echvi_2485	0.45	-1.1
2,953,490	-		Echvi_2485	0.46	+1.2
2,953,490	-		Echvi_2485	0.46	-1.8
2,953,558	-		Echvi_2485	0.52	-1.3
2,953,568	+		Echvi_2485	0.53	+0.6
2,953,568	+		Echvi_2485	0.53	-2.4
2,953,568	+		Echvi_2485	0.53	+1.1
2,953,568	+		Echvi_2485	0.53	+0.8
2,953,645	+		Echvi_2485	0.60	+0.7
2,953,646	-		Echvi_2485	0.60	-0.1
2,953,654	+		Echvi_2485	0.61	+2.2
2,953,654	+		Echvi_2485	0.61	+1.4
2,953,663	+		Echvi_2485	0.62	+0.4
2,953,664	-		Echvi_2485	0.62	+0.6