Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2469

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,928,958	-		Echvi_2468	0.83	-2.0
2,929,035	-				+1.8
2,929,095	-				-0.4
2,929,138	-				-0.2
2,929,156	-				-1.2
2,929,236	-				-1.2
2,929,280	+				+2.3
2,929,291	+				-1.0
2,929,292	-				-2.3
2,929,292	-				-0.2
2,929,292	-				-3.5
2,929,292	-				-1.0
2,929,292	-				+1.8
2,929,334	+				+1.3
2,929,345	+				-1.7
2,929,365	+				+0.6
2,929,368	+				-0.6
2,929,369	-				+0.5
2,929,369	-				-2.9
2,929,371	+				+0.9
2,929,371	+				-1.0
2,929,372	-				+0.4
2,929,372	-				+0.4
2,929,372	-				+0.6
2,929,372	-				-0.6
2,929,372	-				+0.6
2,929,372	-				+1.0
2,929,376	+				+1.1
2,929,377	-				-1.4
2,929,377	-				+0.5
2,929,380	+				-0.8
2,929,380	+				+1.5
2,929,380	+				+2.7
2,929,380	+				-1.0
2,929,405	-				-0.1
2,929,413	-				+0.6
2,929,418	+				+1.4
2,929,439	+				+2.6
2,929,440	+				+0.6
2,929,440	-				+1.9
2,929,442	-				+1.6
2,929,442	-				-1.1
2,929,442	-				-2.6
2,929,471	+				+1.8
2,929,565	-				+0.8
2,929,591	+				+4.0
2,929,638	+				-0.5
2,929,639	-				-1.5
2,929,639	-				-2.5
2,929,647	-				-0.2
2,929,701	-				+2.9
2,929,777	-		Echvi_2469	0.14	-1.0
2,929,780	-		Echvi_2469	0.14	+1.8
2,929,780	-		Echvi_2469	0.14	-2.0
2,929,803	+		Echvi_2469	0.18	-1.7
2,929,803	+		Echvi_2469	0.18	-2.6
2,929,803	+		Echvi_2469	0.18	+0.4
2,929,804	-		Echvi_2469	0.18	-1.2
2,929,804	-		Echvi_2469	0.18	+0.2
2,929,815	+		Echvi_2469	0.20	+0.0
2,929,816	-		Echvi_2469	0.20	+0.8
2,929,839	+		Echvi_2469	0.23	-0.7
2,929,839	+		Echvi_2469	0.23	-1.1
2,929,840	-		Echvi_2469	0.24	-2.2
2,929,840	-		Echvi_2469	0.24	-0.5
2,929,840	-		Echvi_2469	0.24	+0.8
2,929,846	+		Echvi_2469	0.25	-0.9
2,929,847	-		Echvi_2469	0.25	-1.2
2,929,876	+		Echvi_2469	0.29	-2.2
2,929,876	+		Echvi_2469	0.29	+1.6
2,929,929	+		Echvi_2469	0.38	+0.4
2,929,930	-		Echvi_2469	0.38	-0.3
2,929,937	+		Echvi_2469	0.39	+0.7
2,929,938	-		Echvi_2469	0.39	-1.9
2,929,938	-		Echvi_2469	0.39	-3.0
2,929,985	-		Echvi_2469	0.47	+1.1
2,929,985	-		Echvi_2469	0.47	+1.2
2,930,036	+		Echvi_2469	0.55	-1.1
2,930,037	-		Echvi_2469	0.55	-2.2
2,930,037	-		Echvi_2469	0.55	+1.1
2,930,069	+		Echvi_2469	0.60	-1.3
2,930,070	-		Echvi_2469	0.60	-0.8
2,930,070	-		Echvi_2469	0.60	+1.8
2,930,070	-		Echvi_2469	0.60	+1.1
2,930,107	+		Echvi_2469	0.66	+0.9
2,930,107	+		Echvi_2469	0.66	+0.2
2,930,107	+		Echvi_2469	0.66	-2.0
2,930,107	+		Echvi_2469	0.66	+2.8
2,930,193	-		Echvi_2469	0.80	-2.5
2,930,247	+		Echvi_2469	0.88	-0.1
2,930,323	+				+1.1
2,930,323	+				+0.2
2,930,323	+				-1.8
2,930,328	+				+3.6
2,930,329	-				-2.0
2,930,342	+				+0.2
2,930,343	-				+2.2
2,930,345	+				-0.1
2,930,351	+				+0.2
2,930,354	+				+0.0
2,930,431	+				+4.4
2,930,482	-				-2.2
2,930,488	-				+1.5
2,930,493	-				-1.2
2,930,493	-				+0.6
2,930,502	-				-1.2
2,930,523	-				+1.0
2,930,523	-				-1.0
2,930,584	+				+1.8
2,930,584	+				-2.6
2,930,584	+				+0.2
2,930,584	+				-3.0
2,930,594	+				+1.2
2,930,647	-				-0.1
2,930,653	+				-1.1
2,930,653	+				+0.2
2,930,654	-				-3.3
2,930,659	+				-0.6
2,930,719	+				+0.0
2,930,719	+				-1.0
2,930,740	+				+1.6
2,930,740	+				-3.2
2,930,740	+				+1.8
2,930,749	+				-1.3
2,930,772	+				-0.6
2,930,772	+				-1.1
2,930,773	-				-0.3
2,930,773	-				+0.6
2,930,777	-				-2.1
2,930,788	+				+0.2
2,930,819	-				+0.8
2,930,922	-		Echvi_2470	0.55	-0.5
2,930,925	+		Echvi_2470	0.57	+0.6
2,930,925	+		Echvi_2470	0.57	-2.0
2,930,926	-		Echvi_2470	0.57	-1.1
2,930,926	-		Echvi_2470	0.57	+0.2
2,930,926	-		Echvi_2470	0.57	+1.2
2,930,979	+		Echvi_2470	0.89	-1.2
2,931,001	-				+0.2
2,931,148	+				-0.6
2,931,149	-				+0.1
2,931,154	+				-0.6
2,931,249	+		Echvi_2471	0.11	-2.2
2,931,288	+		Echvi_2471	0.14	+0.2
2,931,291	+		Echvi_2471	0.14	+1.6