Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2401
Experiment: m.b. D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. D-Cycloserine 0.064 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,843,639 | - | -1.9 | |||
2,843,712 | + | +2.5 | |||
2,843,758 | + | -0.6 | |||
2,843,778 | - | -0.4 | |||
2,843,796 | + | -2.2 | |||
2,843,824 | + | Echvi_2401 | 0.18 | -1.6 | |
2,843,858 | - | Echvi_2401 | 0.31 | -1.0 | |
2,843,907 | + | Echvi_2401 | 0.50 | +1.2 | |
2,843,910 | + | +1.2 | |||
2,843,911 | - | Echvi_2401 | 0.51 | -2.1 | |
2,843,911 | - | Echvi_2401 | 0.51 | +2.8 | |
2,844,042 | - | +1.9 | |||
2,844,064 | - | -1.5 | |||
2,844,308 | + | Echvi_2402 | 0.42 | -1.1 | |
2,844,308 | + | Echvi_2402 | 0.42 | -1.4 | |
2,844,337 | + | Echvi_2402 | 0.48 | -0.1 | |
2,844,339 | + | Echvi_2402 | 0.49 | +0.6 | |
2,844,339 | + | Echvi_2402 | 0.49 | +1.0 | |
2,844,564 | - | +1.7 | |||
2,844,564 | - | +2.2 |
Or see this region's nucleotide sequence