Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2234

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,657,191	+				-1.2
2,657,192	-				+1.2
2,657,192	-				-2.9
2,657,199	+				+0.2
2,657,200	-				-1.8
2,657,200	-				+0.1
2,657,220	+				-2.5
2,657,270	+				-0.5
2,657,270	+				-1.7
2,657,271	-				+1.7
2,657,271	-				-2.9
2,657,274	+				-0.6
2,657,275	-				-0.3
2,657,275	-				-2.5
2,657,343	+		Echvi_2233	0.11	+0.2
2,657,409	-		Echvi_2233	0.21	-1.3
2,657,419	+		Echvi_2233	0.23	-1.8
2,657,563	+		Echvi_2233	0.44	-1.8
2,657,575	+		Echvi_2233	0.46	-3.7
2,657,575	+		Echvi_2233	0.46	-3.0
2,657,576	-		Echvi_2233	0.46	-0.6
2,657,686	+		Echvi_2233	0.62	+1.2
2,657,686	+		Echvi_2233	0.62	-3.0
2,657,710	-		Echvi_2233	0.66	-1.2
2,657,710	-		Echvi_2233	0.66	-0.8
2,657,729	+		Echvi_2233	0.68	-2.2
2,657,801	-		Echvi_2233	0.79	-3.0
2,657,832	+		Echvi_2233	0.84	-2.6
2,657,832	+		Echvi_2233	0.84	+0.7
2,657,833	-		Echvi_2233	0.84	-1.1
2,657,833	-		Echvi_2233	0.84	-1.0
2,657,933	+				-3.0
2,657,995	-				+1.2
2,658,036	-				+1.7
2,658,036	-				+1.4
2,658,042	+				+0.1
2,658,043	-				+0.3
2,658,043	-				+0.5
2,658,058	-				+0.9
2,658,058	-				-0.1
2,658,094	-				+2.7
2,658,103	+				-2.0
2,658,103	+				+0.7
2,658,103	+				+3.7
2,658,103	+				+1.0
2,658,103	+				-0.9
2,658,104	-				+1.5
2,658,104	-				-2.8
2,658,104	-				+1.2
2,658,172	+				-2.4
2,658,172	+				-1.9
2,658,172	+				-1.2
2,658,173	-				+0.1
2,658,206	+				+0.4
2,658,220	-				+1.4
2,658,254	-				+0.2
2,658,268	-		Echvi_2234	0.10	+1.0
2,658,268	-		Echvi_2234	0.10	+1.3
2,658,268	-		Echvi_2234	0.10	+4.9
2,658,305	-		Echvi_2234	0.13	+2.1
2,658,334	+		Echvi_2234	0.15	-2.0
2,658,341	-		Echvi_2234	0.15	+2.0
2,658,353	-		Echvi_2234	0.16	-1.9
2,658,369	+		Echvi_2234	0.17	-0.6
2,658,418	+		Echvi_2234	0.20	-0.9
2,658,461	-		Echvi_2234	0.23	-2.2
2,658,471	-		Echvi_2234	0.24	+0.5
2,658,531	+		Echvi_2234	0.27	+2.2
2,658,588	+		Echvi_2234	0.31	+1.2
2,658,613	+		Echvi_2234	0.33	+2.7
2,658,613	+		Echvi_2234	0.33	-2.3
2,658,804	-		Echvi_2234	0.45	-1.8
2,658,824	-		Echvi_2234	0.46	+0.7
2,658,847	-		Echvi_2234	0.48	-3.1
2,658,847	-		Echvi_2234	0.48	+2.1
2,658,847	-		Echvi_2234	0.48	+1.1
2,658,884	+		Echvi_2234	0.50	+1.4
2,658,901	-		Echvi_2234	0.51	+1.8
2,658,920	+		Echvi_2234	0.53	-0.3
2,658,952	+		Echvi_2234	0.55	+2.0
2,659,062	-		Echvi_2234	0.62	+4.2
2,659,063	+		Echvi_2234	0.62	+0.1
2,659,097	+		Echvi_2234	0.64	+2.2
2,659,138	+		Echvi_2234	0.67	-3.1
2,659,290	+		Echvi_2234	0.77	-0.4
2,659,291	-		Echvi_2234	0.77	+0.3
2,659,355	+		Echvi_2234	0.81	+0.0
2,659,355	+		Echvi_2234	0.81	+1.4
2,659,356	-		Echvi_2234	0.81	+0.2
2,659,393	+		Echvi_2234	0.83	+0.6
2,659,393	+		Echvi_2234	0.83	-0.1
2,659,394	-		Echvi_2234	0.83	+1.6
2,659,394	-		Echvi_2234	0.83	+1.2
2,659,394	-		Echvi_2234	0.83	-0.6
2,659,394	-		Echvi_2234	0.83	+1.1
2,659,395	+		Echvi_2234	0.84	+0.7
2,659,395	+		Echvi_2234	0.84	-0.9
2,659,395	+		Echvi_2234	0.84	+1.9
2,659,474	+		Echvi_2234	0.89	-1.3
2,659,475	-		Echvi_2234	0.89	+0.4
2,659,499	+				+0.3
2,659,563	+				+1.4
2,659,563	+				+1.0
2,659,564	-				-3.3
2,659,598	+				+0.1
2,659,748	+		Echvi_2235	0.15	-0.1
2,659,749	-		Echvi_2235	0.15	-2.0
2,659,805	+		Echvi_2235	0.24	-1.0
2,659,805	+		Echvi_2235	0.24	-2.7
2,659,805	+		Echvi_2235	0.24	+0.0
2,659,805	+		Echvi_2235	0.24	+1.8
2,659,805	+		Echvi_2235	0.24	+1.5
2,659,806	-		Echvi_2235	0.24	-1.5
2,659,806	-		Echvi_2235	0.24	+0.8
2,659,806	-		Echvi_2235	0.24	+0.1
2,659,806	-		Echvi_2235	0.24	+0.2
2,659,806	-		Echvi_2235	0.24	-2.7
2,659,830	+		Echvi_2235	0.28	+1.3
2,659,831	-		Echvi_2235	0.28	+2.1
2,659,835	+		Echvi_2235	0.29	+0.6
2,659,835	+		Echvi_2235	0.29	-3.1
2,659,836	-		Echvi_2235	0.29	+0.9
2,659,836	-		Echvi_2235	0.29	+2.2
2,659,875	-		Echvi_2235	0.35	-0.9
2,659,875	-		Echvi_2235	0.35	-0.1
2,660,064	+		Echvi_2235	0.65	+0.4
2,660,065	-		Echvi_2235	0.65	-1.8
2,660,065	-		Echvi_2235	0.65	-0.3
2,660,065	-		Echvi_2235	0.65	+1.0
2,660,095	+		Echvi_2235	0.70	+1.4
2,660,095	+		Echvi_2235	0.70	-2.6
2,660,096	-		Echvi_2235	0.70	+1.7
2,660,096	-		Echvi_2235	0.70	-0.6
2,660,185	+		Echvi_2235	0.84	+0.3
2,660,185	+		Echvi_2235	0.84	+1.9
2,660,197	+		Echvi_2235	0.86	-3.3
2,660,204	+		Echvi_2235	0.87	-3.6
2,660,204	+		Echvi_2235	0.87	-1.5
2,660,205	-		Echvi_2235	0.87	+2.2
2,660,206	+		Echvi_2235	0.88	+1.1
2,660,227	+				-0.0
2,660,343	-				+0.3
2,660,365	-				-1.6
2,660,365	-				-0.1
2,660,441	+				-0.4
2,660,532	+				+0.9
2,660,555	+				+0.3
2,660,555	+				-2.1
2,660,558	+				+0.3
2,660,558	+				-0.6
2,660,626	+				-0.9
2,660,630	-				-0.6