Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2233

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,656,269	+		Echvi_2231	0.62	-1.7
2,656,300	-		Echvi_2231	0.64	-1.7
2,656,306	-		Echvi_2231	0.64	-1.9
2,656,308	+		Echvi_2231	0.65	+1.3
2,656,308	+		Echvi_2231	0.65	-2.0
2,656,309	-		Echvi_2231	0.65	+0.5
2,656,309	-		Echvi_2231	0.65	+1.6
2,656,309	-		Echvi_2231	0.65	-2.6
2,656,311	+		Echvi_2231	0.65	-0.1
2,656,311	+		Echvi_2231	0.65	-0.9
2,656,312	-		Echvi_2231	0.65	+1.3
2,656,378	+		Echvi_2231	0.70	+0.7
2,656,383	+		Echvi_2231	0.70	+2.0
2,656,383	+		Echvi_2231	0.70	-0.8
2,656,383	+		Echvi_2231	0.70	-0.1
2,656,501	+		Echvi_2231	0.79	+2.6
2,656,501	+		Echvi_2231	0.79	-0.3
2,656,502	-		Echvi_2231	0.79	+1.4
2,656,502	-		Echvi_2231	0.79	-3.1
2,656,502	-		Echvi_2231	0.79	+0.8
2,656,530	+		Echvi_2231	0.82	-2.0
2,656,541	+		Echvi_2231	0.82	+1.3
2,656,570	-		Echvi_2231	0.85	+1.4
2,656,624	+		Echvi_2231	0.89	-0.6
2,656,786	-				-1.0
2,656,791	-				+2.7
2,656,815	+				+1.4
2,656,815	+				+0.2
2,656,816	-				-1.3
2,656,854	-				+0.7
2,656,928	-		Echvi_2232	0.28	+1.5
2,657,008	+		Echvi_2232	0.49	+2.2
2,657,058	+		Echvi_2232	0.61	-1.5
2,657,058	+		Echvi_2232	0.61	+0.6
2,657,103	+		Echvi_2232	0.73	+0.7
2,657,103	+		Echvi_2232	0.73	-0.2
2,657,191	+				-1.2
2,657,192	-				+1.2
2,657,192	-				-2.9
2,657,199	+				+0.2
2,657,200	-				-1.8
2,657,200	-				+0.1
2,657,220	+				-2.5
2,657,270	+				-0.5
2,657,270	+				-1.7
2,657,271	-				+1.7
2,657,271	-				-2.9
2,657,274	+				-0.6
2,657,275	-				-0.3
2,657,275	-				-2.5
2,657,343	+		Echvi_2233	0.11	+0.2
2,657,409	-		Echvi_2233	0.21	-1.3
2,657,419	+		Echvi_2233	0.23	-1.8
2,657,563	+		Echvi_2233	0.44	-1.8
2,657,575	+		Echvi_2233	0.46	-3.7
2,657,575	+		Echvi_2233	0.46	-3.0
2,657,576	-		Echvi_2233	0.46	-0.6
2,657,686	+		Echvi_2233	0.62	+1.2
2,657,686	+		Echvi_2233	0.62	-3.0
2,657,710	-		Echvi_2233	0.66	-1.2
2,657,710	-		Echvi_2233	0.66	-0.8
2,657,729	+		Echvi_2233	0.68	-2.2
2,657,801	-		Echvi_2233	0.79	-3.0
2,657,832	+		Echvi_2233	0.84	-2.6
2,657,832	+		Echvi_2233	0.84	+0.7
2,657,833	-		Echvi_2233	0.84	-1.1
2,657,833	-		Echvi_2233	0.84	-1.0
2,657,933	+				-3.0
2,657,995	-				+1.2
2,658,036	-				+1.7
2,658,036	-				+1.4
2,658,042	+				+0.1
2,658,043	-				+0.3
2,658,043	-				+0.5
2,658,058	-				+0.9
2,658,058	-				-0.1
2,658,094	-				+2.7
2,658,103	+				-2.0
2,658,103	+				+0.7
2,658,103	+				+3.7
2,658,103	+				+1.0
2,658,103	+				-0.9
2,658,104	-				+1.5
2,658,104	-				-2.8
2,658,104	-				+1.2
2,658,172	+				-2.4
2,658,172	+				-1.9
2,658,172	+				-1.2
2,658,173	-				+0.1
2,658,206	+				+0.4
2,658,220	-				+1.4
2,658,254	-				+0.2
2,658,268	-		Echvi_2234	0.10	+1.0
2,658,268	-		Echvi_2234	0.10	+1.3
2,658,268	-		Echvi_2234	0.10	+4.9
2,658,305	-		Echvi_2234	0.13	+2.1
2,658,334	+		Echvi_2234	0.15	-2.0
2,658,341	-		Echvi_2234	0.15	+2.0
2,658,353	-		Echvi_2234	0.16	-1.9
2,658,369	+		Echvi_2234	0.17	-0.6
2,658,418	+		Echvi_2234	0.20	-0.9
2,658,461	-		Echvi_2234	0.23	-2.2
2,658,471	-		Echvi_2234	0.24	+0.5
2,658,531	+		Echvi_2234	0.27	+2.2
2,658,588	+		Echvi_2234	0.31	+1.2
2,658,613	+		Echvi_2234	0.33	+2.7
2,658,613	+		Echvi_2234	0.33	-2.3
2,658,804	-		Echvi_2234	0.45	-1.8
2,658,824	-		Echvi_2234	0.46	+0.7
2,658,847	-		Echvi_2234	0.48	-3.1
2,658,847	-		Echvi_2234	0.48	+2.1
2,658,847	-		Echvi_2234	0.48	+1.1
2,658,884	+		Echvi_2234	0.50	+1.4
2,658,901	-		Echvi_2234	0.51	+1.8
2,658,920	+		Echvi_2234	0.53	-0.3