Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2213

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,639,540	-				+0.6
2,639,742	+				-2.3
2,639,743	-				+1.4
2,639,743	-				+0.5
2,639,745	+				-1.1
2,639,746	-				+1.1
2,639,746	-				+2.7
2,639,746	-				+0.8
2,639,747	-				-3.6
2,639,749	-				-2.5
2,639,848	-				-2.8
2,639,848	-				-1.3
2,639,848	-				-0.8
2,639,872	-				-0.9
2,639,918	+				+2.3
2,639,919	-				-2.4
2,639,971	+				-2.4
2,639,971	+				-1.1
2,639,972	-				-0.0
2,640,027	-		Echvi_2212	0.14	+0.6
2,640,027	-		Echvi_2212	0.14	+0.3
2,640,027	-		Echvi_2212	0.14	+3.3
2,640,027	-		Echvi_2212	0.14	+1.0
2,640,027	-		Echvi_2212	0.14	+0.7
2,640,028	+		Echvi_2212	0.14	-0.5
2,640,029	-		Echvi_2212	0.14	+1.3
2,640,062	+		Echvi_2212	0.20	-0.3
2,640,062	+		Echvi_2212	0.20	+0.8
2,640,063	-		Echvi_2212	0.20	+2.0
2,640,063	-		Echvi_2212	0.20	+2.3
2,640,166	+		Echvi_2212	0.39	-0.5
2,640,166	+		Echvi_2212	0.39	+1.8
2,640,166	+		Echvi_2212	0.39	-2.1
2,640,166	+		Echvi_2212	0.39	-0.7
2,640,303	+		Echvi_2212	0.63	+2.0
2,640,303	+		Echvi_2212	0.63	-0.3
2,640,454	-				-3.4
2,640,502	+				-1.4
2,640,582	+		Echvi_2213	0.10	-1.0
2,640,583	-		Echvi_2213	0.10	+0.7
2,640,670	+		Echvi_2213	0.22	+2.5
2,640,670	+		Echvi_2213	0.22	+1.2
2,640,683	-		Echvi_2213	0.23	-0.9
2,640,683	-		Echvi_2213	0.23	-1.4
2,640,750	+		Echvi_2213	0.32	+2.3
2,640,750	+		Echvi_2213	0.32	-1.5
2,640,750	+		Echvi_2213	0.32	+1.3
2,640,751	-		Echvi_2213	0.32	+2.1
2,640,751	-		Echvi_2213	0.32	-1.8
2,640,796	+		Echvi_2213	0.38	-1.5
2,640,796	+		Echvi_2213	0.38	+2.4
2,640,797	-		Echvi_2213	0.38	+0.3
2,640,802	-		Echvi_2213	0.39	-0.3
2,640,808	+		Echvi_2213	0.40	+1.3
2,640,809	-		Echvi_2213	0.40	+4.2
2,640,831	-		Echvi_2213	0.43	+1.1
2,640,862	+		Echvi_2213	0.47	-1.8
2,640,863	-		Echvi_2213	0.47	+1.4
2,640,885	+		Echvi_2213	0.50	-0.9
2,640,885	+		Echvi_2213	0.50	-2.2
2,640,885	+		Echvi_2213	0.50	-0.9
2,640,886	-		Echvi_2213	0.50	+2.7
2,640,886	-		Echvi_2213	0.50	+0.2
2,640,886	-		Echvi_2213	0.50	+1.6
2,641,075	-		Echvi_2213	0.74	-0.7
2,641,114	-		Echvi_2213	0.80	+1.0
2,641,212	+				+0.7
2,641,213	-				-2.2
2,641,351	+				+1.5
2,642,016	-				-1.0
2,642,163	-		Echvi_2215	0.12	+2.6
2,642,163	-		Echvi_2215	0.12	+2.9
2,642,218	+		Echvi_2215	0.20	+1.8
2,642,230	+		Echvi_2215	0.22	-0.9
2,642,230	+		Echvi_2215	0.22	+1.4
2,642,236	+		Echvi_2215	0.23	+0.1
2,642,239	+		Echvi_2215	0.23	+2.3
2,642,255	+		Echvi_2215	0.25	+2.3
2,642,256	-		Echvi_2215	0.25	+2.7