Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2202

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,628,224	-				+0.7
2,628,227	+				+0.7
2,628,228	-				-1.5
2,628,258	-				+0.9
2,628,283	+				+0.9
2,628,284	-				+1.8
2,628,284	-				-0.1
2,628,322	+				+0.3
2,628,322	+				-3.1
2,628,324	+				-0.0
2,628,325	-				-1.5
2,628,325	-				-0.7
2,628,371	+				-2.2
2,628,371	+				+1.5
2,628,372	-				-2.3
2,628,372	-				-3.0
2,628,390	-				+1.4
2,628,419	+				-0.9
2,628,419	+				-0.6
2,628,420	-				+1.4
2,628,421	+				-1.4
2,628,421	+				-3.2
2,628,422	-				-2.9
2,628,696	+		Echvi_2201	0.51	-2.1
2,628,697	-		Echvi_2201	0.51	+3.8
2,628,798	-		Echvi_2201	0.69	+2.1
2,628,819	-		Echvi_2201	0.73	-2.7
2,628,842	+		Echvi_2201	0.77	+0.3
2,628,843	-		Echvi_2201	0.77	+0.5
2,628,847	+		Echvi_2201	0.78	+4.0
2,628,877	+		Echvi_2201	0.83	-1.3
2,628,878	-		Echvi_2201	0.83	-1.2
2,628,917	-				-3.5
2,628,926	-				-0.3
2,628,946	-				+1.9
2,628,952	-				+1.1
2,628,974	+				-0.9
2,628,975	-				+0.7
2,629,008	+				-1.6
2,629,008	+				+1.5
2,629,009	-				+1.9
2,629,127	-				+1.5
2,629,139	-				+0.8
2,629,151	+				-0.0
2,629,152	-				-0.9
2,629,153	+				-0.1
2,629,153	+				+1.2
2,629,176	+				-0.7
2,629,177	-				+2.0
2,629,193	+				+1.8
2,629,219	+				-1.7
2,629,290	-		Echvi_2202	0.13	-0.4
2,629,471	-		Echvi_2202	0.30	+1.5
2,629,561	+		Echvi_2202	0.38	-0.2
2,629,671	-		Echvi_2202	0.49	-2.2
2,629,681	+		Echvi_2202	0.50	-0.4
2,629,737	+		Echvi_2202	0.55	-1.0
2,629,744	-		Echvi_2202	0.56	-0.4
2,629,761	+		Echvi_2202	0.57	-1.5
2,629,772	+		Echvi_2202	0.58	+1.4
2,629,773	-		Echvi_2202	0.58	-0.9
2,629,773	-		Echvi_2202	0.58	-1.0
2,629,773	-		Echvi_2202	0.58	+2.9
2,629,792	-		Echvi_2202	0.60	+1.3
2,629,805	+		Echvi_2202	0.61	-1.8
2,629,864	+		Echvi_2202	0.67	-1.9
2,629,879	+		Echvi_2202	0.68	+1.3
2,629,959	+		Echvi_2202	0.76	-0.5
2,629,960	-		Echvi_2202	0.76	+1.3
2,629,960	-		Echvi_2202	0.76	-1.4
2,629,960	-		Echvi_2202	0.76	+0.0
2,629,960	-		Echvi_2202	0.76	-1.0
2,629,960	-		Echvi_2202	0.76	-0.9
2,629,963	+		Echvi_2202	0.76	-1.2
2,629,964	-		Echvi_2202	0.76	-1.3
2,629,971	+		Echvi_2202	0.77	+0.3
2,629,971	+		Echvi_2202	0.77	+1.1
2,629,972	-		Echvi_2202	0.77	-2.4
2,629,985	+		Echvi_2202	0.78	-1.0
2,630,128	+				+1.8
2,630,129	-				-0.3
2,630,203	+				+0.3
2,630,221	-				-1.8
2,630,252	+				+0.7
2,630,258	+				-2.1
2,630,258	+				+1.9
2,630,258	+				-0.6
2,630,264	+				-0.0
2,630,286	-		Echvi_2203	0.12	-0.5
2,630,296	-		Echvi_2203	0.13	+0.4
2,630,317	-		Echvi_2203	0.17	+0.7
2,630,332	+		Echvi_2203	0.20	+0.4
2,630,409	+		Echvi_2203	0.34	-0.4
2,630,438	+		Echvi_2203	0.39	-1.6
2,630,460	-		Echvi_2203	0.43	+1.1
2,630,563	+		Echvi_2203	0.62	+2.4
2,630,576	-		Echvi_2203	0.64	-0.1
2,630,760	+				-1.8
2,630,761	-				-2.0
2,630,853	-				+0.3
2,630,853	-				-1.0
2,630,894	+				+0.4
2,630,903	+				-1.7
2,630,906	+				+0.9
2,630,981	-		Echvi_2204	0.11	+0.7
2,631,002	+		Echvi_2204	0.13	+0.9
2,631,003	-		Echvi_2204	0.14	+0.3
2,631,036	+		Echvi_2204	0.18	+0.3
2,631,036	+		Echvi_2204	0.18	-1.1
2,631,037	-		Echvi_2204	0.18	-0.1
2,631,037	-		Echvi_2204	0.18	-1.5
2,631,081	+		Echvi_2204	0.24	-2.3
2,631,114	+		Echvi_2204	0.29	+1.1
2,631,132	+		Echvi_2204	0.31	+0.9
2,631,136	-		Echvi_2204	0.32	-1.4
2,631,148	+		Echvi_2204	0.34	-3.3