Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2118

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,503,029	-				-0.4
2,503,029	-				-0.6
2,503,048	+		Echvi_2118	0.12	+0.8
2,503,049	-		Echvi_2118	0.12	+1.4
2,503,057	+		Echvi_2118	0.12	+1.0
2,503,057	+		Echvi_2118	0.12	-0.2
2,503,058	-		Echvi_2118	0.13	+1.3
2,503,058	-		Echvi_2118	0.13	-1.3
2,503,107	+		Echvi_2118	0.18	+3.2
2,503,112	+		Echvi_2118	0.18	-2.8
2,503,163	+		Echvi_2118	0.23	-2.6
2,503,170	+		Echvi_2118	0.24	-0.5
2,503,170	+		Echvi_2118	0.24	-2.8
2,503,170	+		Echvi_2118	0.24	+1.4
2,503,170	+		Echvi_2118	0.24	-2.5
2,503,171	-		Echvi_2118	0.24	+0.8
2,503,171	-		Echvi_2118	0.24	-1.0
2,503,171	-		Echvi_2118	0.24	+1.6
2,503,181	+		Echvi_2118	0.25	-1.1
2,503,286	+		Echvi_2118	0.36	-1.0
2,503,287	-		Echvi_2118	0.36	-1.6
2,503,287	-		Echvi_2118	0.36	-2.4
2,503,287	-		Echvi_2118	0.36	+0.4
2,503,336	+		Echvi_2118	0.41	+1.1
2,503,336	+		Echvi_2118	0.41	-1.3
2,503,370	+		Echvi_2118	0.44	-1.1
2,503,370	+		Echvi_2118	0.44	-0.8
2,503,373	+		Echvi_2118	0.45	+0.4
2,503,373	+		Echvi_2118	0.45	+0.1
2,503,374	-		Echvi_2118	0.45	-1.0
2,503,374	-		Echvi_2118	0.45	+0.3
2,503,485	+		Echvi_2118	0.56	+0.8
2,503,485	+		Echvi_2118	0.56	-1.8
2,503,485	+		Echvi_2118	0.56	+0.5
2,503,487	+		Echvi_2118	0.56	+4.1
2,503,487	+		Echvi_2118	0.56	-1.6
2,503,487	+		Echvi_2118	0.56	-0.6
2,503,488	-		Echvi_2118	0.56	+1.5
2,503,732	+		Echvi_2118	0.81	+0.0
2,503,906	-				-0.5
2,503,911	-				+0.4
2,503,917	+				+0.4
2,503,922	+				+2.2
2,503,940	-				+2.2
2,503,940	-				+2.1
2,503,981	-				+0.3
2,504,011	+				-0.2
2,504,012	-				+0.4
2,504,068	+				-0.8
2,504,068	+				-0.5
2,504,068	+				-0.2
2,504,101	-				+1.7
2,504,131	+				-0.9
2,504,175	-				+1.0
2,504,187	-				+2.2
2,504,187	-				-0.5
2,504,270	-				-1.3
2,504,270	-				+0.6
2,504,319	+				-1.6
2,504,330	+				-2.6
2,504,330	+				+0.9
2,504,330	+				+0.6
2,504,334	+				-0.1
2,504,406	+				+3.6