Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2116

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,500,502	-		Echvi_2115	0.52	-1.6
2,500,613	+		Echvi_2115	0.61	-0.9
2,500,614	-		Echvi_2115	0.61	-1.7
2,500,614	-		Echvi_2115	0.61	+3.3
2,500,617	+		Echvi_2115	0.62	-2.5
2,500,617	+		Echvi_2115	0.62	+0.4
2,500,618	-		Echvi_2115	0.62	-1.5
2,500,623	+		Echvi_2115	0.62	-0.9
2,500,623	+		Echvi_2115	0.62	-0.1
2,500,624	-		Echvi_2115	0.62	-1.1
2,500,698	+		Echvi_2115	0.69	+1.1
2,500,699	-		Echvi_2115	0.69	-0.8
2,500,704	+		Echvi_2115	0.69	+3.1
2,500,765	+		Echvi_2115	0.75	-1.3
2,500,765	+		Echvi_2115	0.75	+0.8
2,500,863	-		Echvi_2115	0.83	+2.5
2,500,863	-		Echvi_2115	0.83	+0.4
2,500,867	-		Echvi_2115	0.84	-2.2
2,501,069	-				+1.4
2,501,069	-				-1.3
2,501,098	-				-2.8
2,501,115	+				-0.3
2,501,115	+				-0.2
2,501,184	+				+1.1
2,501,185	-				+2.0
2,501,213	-				-1.6
2,501,235	+				-1.8
2,501,235	+				+0.8
2,501,383	-				-2.7
2,501,455	+				-1.6
2,501,455	+				+1.3
2,501,455	+				+2.1
2,501,487	+				+3.6
2,501,543	+		Echvi_2116	0.15	+0.7
2,501,543	+		Echvi_2116	0.15	+1.7
2,501,549	+		Echvi_2116	0.17	+0.8
2,501,569	+		Echvi_2116	0.22	+1.4
2,501,569	+		Echvi_2116	0.22	+1.6
2,501,569	+		Echvi_2116	0.22	+0.8
2,501,570	-		Echvi_2116	0.22	-0.1
2,501,570	-		Echvi_2116	0.22	-1.5
2,501,570	-		Echvi_2116	0.22	+0.4
2,501,571	+		Echvi_2116	0.22	+1.9
2,501,571	+		Echvi_2116	0.22	+0.7
2,501,572	-		Echvi_2116	0.23	-0.2
2,501,582	+		Echvi_2116	0.25	-0.1
2,501,583	-		Echvi_2116	0.25	-2.6
2,501,609	+		Echvi_2116	0.32	+2.4
2,501,700	+		Echvi_2116	0.56	-1.2
2,501,700	+		Echvi_2116	0.56	-0.8
2,501,730	+		Echvi_2116	0.64	+2.0
2,501,731	-		Echvi_2116	0.64	-0.4
2,501,731	-		Echvi_2116	0.64	-0.6
2,501,790	-		Echvi_2116	0.80	-1.5
2,501,795	-		Echvi_2116	0.81	+1.8
2,501,818	+		Echvi_2116	0.87	-0.5
2,501,837	-				+1.1
2,501,844	-				+0.0
2,501,881	+				+2.2