Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2024

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,383,826	+		Echvi_2023	0.82	+0.6
2,383,989	+		Echvi_2023	0.86	+0.7
2,384,005	+		Echvi_2023	0.86	-1.7
2,384,013	+		Echvi_2023	0.86	+0.4
2,384,013	+		Echvi_2023	0.86	-1.6
2,384,046	-		Echvi_2023	0.87	-1.6
2,384,046	-		Echvi_2023	0.87	-0.2
2,384,061	+		Echvi_2023	0.88	-0.1
2,384,062	-		Echvi_2023	0.88	+0.7
2,384,062	-		Echvi_2023	0.88	-2.1
2,384,105	+		Echvi_2023	0.89	+2.6
2,384,106	-		Echvi_2023	0.89	+0.1
2,384,106	-		Echvi_2023	0.89	-0.5
2,384,119	+		Echvi_2023	0.89	-0.8
2,384,119	+		Echvi_2023	0.89	-1.6
2,384,201	-				+1.0
2,384,201	-				-1.2
2,384,339	+				-0.1
2,384,342	+				-0.5
2,384,342	+				-0.3
2,384,355	+				+1.4
2,384,400	+				-1.3
2,384,404	+				-0.5
2,384,404	+				-2.2
2,384,404	+				-1.9
2,384,405	-				-0.1
2,384,447	+				+0.2
2,384,448	-				+2.5
2,384,463	+				-1.6
2,384,464	-				-0.9
2,384,490	+				+2.5
2,384,496	+				+2.1
2,384,496	+				+2.0
2,384,576	+				-0.5
2,384,577	-				+2.5
2,384,587	+				+2.7
2,384,588	-				+0.0
2,384,588	-				-1.8
2,384,588	-				-1.3
2,384,642	-				+0.5
2,384,713	+				-2.5
2,384,793	+				-1.3
2,384,794	-				+0.5
2,384,797	+				+3.4
2,384,797	+				-0.0
2,384,797	+				+0.7
2,384,798	-				+1.8
2,384,798	-				-1.3
2,384,798	-				+0.1
2,384,900	-		Echvi_2024	0.15	+0.6
2,384,919	-		Echvi_2024	0.16	+1.2
2,384,931	+		Echvi_2024	0.17	-1.7
2,384,932	-		Echvi_2024	0.17	+0.2
2,384,946	-		Echvi_2024	0.18	+1.5
2,384,998	-		Echvi_2024	0.22	+1.6
2,385,158	+		Echvi_2024	0.33	+0.7
2,385,384	-		Echvi_2024	0.49	-1.5
2,385,393	-		Echvi_2024	0.49	+1.7
2,385,397	-		Echvi_2024	0.50	-1.4
2,385,477	+		Echvi_2024	0.55	+0.6
2,385,478	-		Echvi_2024	0.55	+3.8
2,385,478	-		Echvi_2024	0.55	+0.1
2,385,555	+		Echvi_2024	0.61	+1.4
2,385,610	+		Echvi_2024	0.65	-1.1
2,385,610	+		Echvi_2024	0.65	-0.7
2,385,610	+		Echvi_2024	0.65	-1.4
2,385,610	+		Echvi_2024	0.65	+2.5
2,385,610	+		Echvi_2024	0.65	-0.7
2,385,611	-		Echvi_2024	0.65	-1.3
2,385,616	+		Echvi_2024	0.65	-0.7
2,385,617	-		Echvi_2024	0.65	-2.2
2,385,617	-		Echvi_2024	0.65	-0.1
2,385,617	-		Echvi_2024	0.65	-0.1
2,385,617	-		Echvi_2024	0.65	+1.2
2,385,645	+		Echvi_2024	0.67	-3.9
2,385,645	+		Echvi_2024	0.67	-1.0
2,385,646	-		Echvi_2024	0.67	-1.6
2,385,668	+		Echvi_2024	0.69	-0.7
2,385,669	-		Echvi_2024	0.69	+0.9
2,385,669	-		Echvi_2024	0.69	+1.1
2,385,669	-		Echvi_2024	0.69	+1.2
2,385,669	-		Echvi_2024	0.69	+0.3
2,385,669	-		Echvi_2024	0.69	+1.0
2,385,669	-		Echvi_2024	0.69	-0.3
2,385,670	+		Echvi_2024	0.69	+3.4
2,385,670	+		Echvi_2024	0.69	+0.6
2,385,671	-		Echvi_2024	0.69	+1.9
2,385,671	-		Echvi_2024	0.69	+1.1
2,385,671	-		Echvi_2024	0.69	+2.7
2,385,768	+		Echvi_2024	0.76	-0.8
2,385,769	-		Echvi_2024	0.76	-0.3
2,385,769	-		Echvi_2024	0.76	-0.3
2,385,772	+		Echvi_2024	0.76	-2.8
2,385,808	+		Echvi_2024	0.78	+0.9
2,385,808	+		Echvi_2024	0.78	-2.6
2,385,812	+		Echvi_2024	0.79	-1.5
2,385,813	-		Echvi_2024	0.79	-0.5
2,385,850	-		Echvi_2024	0.81	-1.1
2,385,868	+		Echvi_2024	0.83	+0.9
2,385,869	-		Echvi_2024	0.83	+0.0
2,385,942	-		Echvi_2024	0.88	+0.1
2,385,947	+		Echvi_2024	0.88	-0.5
2,385,947	+		Echvi_2024	0.88	-0.9
2,386,008	-				-0.9
2,386,081	+				-2.2
2,386,130	+				+0.4
2,386,130	+				-1.6
2,386,130	+				+2.3
2,386,180	+				-2.7
2,386,180	+				-0.5
2,386,181	-				+0.5
2,386,233	+				+0.5
2,386,282	+				+0.9
2,386,282	+				+0.4
2,386,282	+				-2.2
2,386,283	-				-2.2
2,386,283	-				-0.2
2,386,307	+				+0.1
2,386,313	+				+0.9
2,386,313	+				-0.4
2,386,313	+				-0.1
2,386,314	-				+0.1
2,386,314	-				-2.8
2,386,405	+		Echvi_2025	0.13	-0.6
2,386,590	-		Echvi_2025	0.25	+0.5
2,386,591	+		Echvi_2025	0.25	-1.9
2,386,592	-		Echvi_2025	0.25	+0.1
2,386,763	+		Echvi_2025	0.36	+0.3
2,386,763	+		Echvi_2025	0.36	-1.0
2,386,764	-		Echvi_2025	0.36	-1.6
2,386,764	-		Echvi_2025	0.36	+4.5
2,386,764	-		Echvi_2025	0.36	-1.6
2,386,778	+		Echvi_2025	0.37	-0.7
2,386,778	+		Echvi_2025	0.37	-1.8
2,386,778	+		Echvi_2025	0.37	-1.7
2,386,783	-		Echvi_2025	0.37	-0.5
2,386,801	+		Echvi_2025	0.38	-2.8
2,386,802	-		Echvi_2025	0.38	+0.1
2,386,814	+		Echvi_2025	0.39	+0.7
2,386,837	-		Echvi_2025	0.41	-2.1
2,386,844	+		Echvi_2025	0.41	+1.6
2,386,845	-		Echvi_2025	0.41	-2.1
2,386,845	-		Echvi_2025	0.41	+1.5
2,386,845	-		Echvi_2025	0.41	+2.5
2,386,862	+		Echvi_2025	0.42	+1.7
2,386,862	+		Echvi_2025	0.42	-3.2
2,386,904	+		Echvi_2025	0.45	-2.9
2,386,905	-		Echvi_2025	0.45	-1.9
2,386,936	-		Echvi_2025	0.47	-0.7
2,386,964	-		Echvi_2025	0.49	-2.5
2,387,051	+		Echvi_2025	0.55	-0.5
2,387,052	-		Echvi_2025	0.55	+0.5
2,387,056	+		Echvi_2025	0.55	+0.1
2,387,056	+		Echvi_2025	0.55	-0.3
2,387,056	+		Echvi_2025	0.55	+1.8
2,387,057	-		Echvi_2025	0.55	+0.7
2,387,061	+		Echvi_2025	0.55	+2.5
2,387,061	+		Echvi_2025	0.55	-2.7
2,387,062	-		Echvi_2025	0.55	-3.0