Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1999

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,349,265	-		Echvi_1997	0.44	+2.3
2,349,286	+		Echvi_1997	0.49	+0.6
2,349,287	-		Echvi_1997	0.49	+0.4
2,349,409	+		Echvi_1997	0.76	-1.1
2,349,409	+		Echvi_1997	0.76	-1.7
2,349,410	-		Echvi_1997	0.76	+2.4
2,349,410	-		Echvi_1997	0.76	-2.6
2,349,455	+		Echvi_1997	0.86	-2.8
2,349,482	+				+1.2
2,349,522	+				+2.9
2,349,574	+		Echvi_1998	0.13	-2.3
2,349,574	+		Echvi_1998	0.13	+2.0
2,349,574	+		Echvi_1998	0.13	-2.6
2,349,575	-		Echvi_1998	0.13	-0.9
2,349,575	-		Echvi_1998	0.13	-0.9
2,349,596	-		Echvi_1998	0.18	-0.9
2,349,689	-		Echvi_1998	0.40	+1.3
2,349,708	+		Echvi_1998	0.45	+0.4
2,349,770	+		Echvi_1998	0.59	+0.1
2,349,846	-		Echvi_1998	0.77	-1.4
2,349,872	+		Echvi_1998	0.84	-0.0
2,349,873	-		Echvi_1998	0.84	+3.1
2,349,890	-		Echvi_1998	0.88	+0.6
2,349,902	+				-0.5
2,349,903	-				+1.1
2,349,903	-				-2.5
2,349,930	-				+0.5
2,350,243	-				-0.1
2,350,246	+				-1.8
2,350,246	+				+0.5
2,350,247	-				-1.6
2,350,247	-				+0.7
2,350,258	-				-0.2
2,350,258	-				+1.2
2,350,330	-		Echvi_1999	0.63	-0.3
2,350,339	-		Echvi_1999	0.71	-2.1
2,350,354	-		Echvi_1999	0.83	-2.6
2,350,373	-				-1.8
2,350,385	-				-1.8
2,350,389	-				-0.5
2,350,389	-				-1.0
2,350,391	+				-1.6
2,350,393	+				+2.5
2,350,393	+				+1.7
2,350,394	-				+0.7
2,350,394	-				-1.5
2,350,394	-				-1.5
2,350,431	+				+2.5
2,350,431	+				-1.8
2,350,431	+				-1.2
2,350,507	+				+3.4
2,350,508	-				-1.9
2,350,653	+				+0.1
2,350,653	+				-1.7
2,350,653	+				-1.0
2,350,653	+				-2.4
2,350,654	-				-1.0
2,350,654	-				-0.7
2,350,703	+				+3.2
2,350,704	-				+0.3
2,350,704	-				-2.5
2,350,786	+		Echvi_2000	0.13	+3.1
2,350,786	+		Echvi_2000	0.13	-1.3
2,350,823	-		Echvi_2000	0.15	-2.7
2,350,823	-		Echvi_2000	0.15	+0.4
2,350,889	+		Echvi_2000	0.17	-1.0
2,350,889	+		Echvi_2000	0.17	+0.7
2,350,900	+		Echvi_2000	0.18	-1.3
2,350,900	+		Echvi_2000	0.18	-0.9
2,350,900	+		Echvi_2000	0.18	-0.5
2,350,900	+		Echvi_2000	0.18	-0.2
2,350,901	-		Echvi_2000	0.18	+0.9
2,350,901	-		Echvi_2000	0.18	+0.3
2,350,962	+		Echvi_2000	0.20	+0.7
2,350,963	-		Echvi_2000	0.20	-0.8
2,351,087	-		Echvi_2000	0.25	-2.0
2,351,088	+		Echvi_2000	0.25	-0.8
2,351,088	+		Echvi_2000	0.25	-0.3
2,351,183	-		Echvi_2000	0.29	+0.2
2,351,183	-		Echvi_2000	0.29	-0.7
2,351,212	+		Echvi_2000	0.30	+0.5
2,351,212	+		Echvi_2000	0.30	-2.9
2,351,212	+		Echvi_2000	0.30	-2.7
2,351,213	-		Echvi_2000	0.30	-2.0
2,351,213	-		Echvi_2000	0.30	+1.4
2,351,213	-		Echvi_2000	0.30	-0.8
2,351,301	-		Echvi_2000	0.34	-1.2
2,351,303	-		Echvi_2000	0.34	-0.7
2,351,303	-		Echvi_2000	0.34	+2.9
2,351,303	-		Echvi_2000	0.34	+1.2
2,351,303	-		Echvi_2000	0.34	+3.5
2,351,304	+		Echvi_2000	0.34	-1.6