Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1994

Experiment: m.b. D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.064 mg/ml
2,346,720	+		Echvi_1992	0.86	-0.9
2,346,834	-				-0.9
2,346,855	-				-2.5
2,346,869	-				+0.1
2,346,892	-				-1.3
2,346,892	-				+1.1
2,346,894	+				-3.4
2,346,908	-				-1.3
2,346,913	-				-3.1
2,346,919	-				-0.5
2,346,919	-				-2.3
2,346,919	-				-0.1
2,346,919	-				-1.0
2,346,925	+				-0.2
2,346,925	+				-0.4
2,346,925	+				-1.6
2,346,925	+				-0.9
2,346,925	+				+1.0
2,346,926	-				-0.1
2,346,926	-				-1.7
2,346,926	-				+0.2
2,346,926	-				-3.4
2,346,926	-				-1.5
2,346,928	+				-4.0
2,346,928	+				-2.5
2,346,928	+				+2.2
2,346,928	+				-0.2
2,346,929	-				-2.4
2,346,935	-				-1.0
2,346,946	+				-1.5
2,346,949	+				-1.6
2,346,969	+				-0.3
2,347,066	+		Echvi_1993	0.20	-1.6
2,347,066	+		Echvi_1993	0.20	-1.0
2,347,067	-		Echvi_1993	0.20	-1.2
2,347,067	-		Echvi_1993	0.20	-1.8
2,347,070	+		Echvi_1993	0.21	-1.3
2,347,070	+		Echvi_1993	0.21	-3.8
2,347,070	+		Echvi_1993	0.21	+0.5
2,347,250	+		Echvi_1993	0.47	-1.0
2,347,250	+		Echvi_1993	0.47	-2.4
2,347,251	-		Echvi_1993	0.47	-3.3
2,347,251	-		Echvi_1993	0.47	-1.2
2,347,251	-		Echvi_1993	0.47	+2.5
2,347,252	+		Echvi_1993	0.47	-1.6
2,347,252	+		Echvi_1993	0.47	-1.4
2,347,253	-		Echvi_1993	0.48	-1.4
2,347,308	+		Echvi_1993	0.56	-1.3
2,347,364	+		Echvi_1993	0.64	-3.0
2,347,365	-		Echvi_1993	0.64	-4.4
2,347,460	-		Echvi_1993	0.78	-1.4
2,347,460	-		Echvi_1993	0.78	-3.5
2,347,460	-		Echvi_1993	0.78	-2.6
2,347,463	-		Echvi_1993	0.78	-2.2
2,347,551	-				-3.0
2,347,593	+				-2.4
2,347,593	+				+1.5
2,347,594	-				-2.0
2,347,595	+				-0.8
2,347,605	+				+0.2
2,347,605	+				-0.6
2,347,606	-				-0.7
2,347,606	-				-3.1
2,347,606	-				-3.0
2,347,606	-				-3.0
2,347,607	+				+2.5
2,347,614	-				-2.2
2,347,631	-				+1.2
2,347,631	-				-1.1
2,347,637	-				+2.2
2,347,637	-				-2.0
2,347,704	+		Echvi_1994	0.12	-1.8
2,347,705	-		Echvi_1994	0.12	+0.5
2,347,792	-		Echvi_1994	0.24	-1.0
2,347,903	+		Echvi_1994	0.40	+0.0
2,347,904	-		Echvi_1994	0.41	+1.5
2,347,908	-		Echvi_1994	0.41	+0.9
2,347,968	+		Echvi_1994	0.50	-0.8
2,347,968	+		Echvi_1994	0.50	-1.6
2,347,968	+		Echvi_1994	0.50	-1.3
2,347,969	-		Echvi_1994	0.50	-0.0
2,347,969	-		Echvi_1994	0.50	-1.2
2,347,969	-		Echvi_1994	0.50	+0.7
2,348,012	+		Echvi_1994	0.56	-2.7
2,348,013	-		Echvi_1994	0.56	+0.0
2,348,014	+		Echvi_1994	0.56	+0.2
2,348,029	-		Echvi_1994	0.58	-2.4
2,348,043	+		Echvi_1994	0.60	+0.8
2,348,114	+		Echvi_1994	0.71	-3.8
2,348,166	+		Echvi_1994	0.78	+1.5
2,348,250	-				-3.1
2,348,250	-				+0.7
2,348,278	-				-0.1
2,348,299	+				+1.5
2,348,300	-				+2.1
2,348,316	-				+1.8
2,348,324	+				-0.6
2,348,325	-				+0.8
2,348,325	-				+1.2
2,348,342	+				-0.7
2,348,343	-				+1.0
2,348,345	-				+0.7
2,348,345	-				-1.1
2,348,345	-				+0.2
2,348,351	-				+1.8
2,348,561	-		Echvi_1995	0.50	-2.5
2,348,569	-		Echvi_1995	0.51	+0.5
2,348,579	+		Echvi_1995	0.54	+0.5
2,348,580	-		Echvi_1995	0.54	-1.9
2,348,580	-		Echvi_1995	0.54	+1.5
2,348,580	-		Echvi_1995	0.54	-0.9
2,348,580	-		Echvi_1995	0.54	+0.2
2,348,580	-		Echvi_1995	0.54	+2.0
2,348,644	+		Echvi_1995	0.67	+0.2
2,348,645	-		Echvi_1995	0.68	-2.0
2,348,665	+		Echvi_1995	0.72	+2.8
2,348,666	-		Echvi_1995	0.72	-1.5
2,348,666	-		Echvi_1995	0.72	-1.7
2,348,677	-		Echvi_1995	0.74	+0.5
2,348,687	+		Echvi_1995	0.76	+0.4
2,348,687	+		Echvi_1995	0.76	-1.5
2,348,688	-		Echvi_1995	0.77	-1.4
2,348,691	-		Echvi_1995	0.77	-0.3
2,348,764	-				+2.7
2,348,796	+				-1.6
2,348,962	+				+0.9
2,348,963	-				+4.1
2,349,012	+				-0.7
2,349,013	-				-2.2
2,349,013	-				-0.1
2,349,051	-				+1.5
2,349,090	+				-2.6
2,349,091	-				+0.4
2,349,091	-				+0.5
2,349,100	+				+1.0
2,349,100	+				-1.5
2,349,100	+				+0.0
2,349,100	+				+1.5
2,349,100	+				+0.5
2,349,101	-				-0.2
2,349,101	-				-2.3
2,349,101	-				-1.7
2,349,112	+		Echvi_1997	0.10	+1.5
2,349,143	+		Echvi_1997	0.17	-1.8
2,349,265	-		Echvi_1997	0.44	+2.3
2,349,286	+		Echvi_1997	0.49	+0.6
2,349,287	-		Echvi_1997	0.49	+0.4